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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
102.3
nTPM
FANTOM5:
93.1
Scaled Tags Per Million
Pig:
102.9
nTPM
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 87.5
2301
Female, age 85, both hemispheres
114.5
1984
Male, age 76, both hemispheres
80.6
2188
Female, age 91, both hemispheres
79.1
2090
Male, age 80, both hemispheres
75.7
Dorsal cochlear nucleus nTPM: 83.8
2187
Female, age 91, both hemispheres
95.8
2802
Male, age 74, right hemisphere
86.2
2370
Male, age 61, both hemispheres
86.1
2058
Male, age 76, both hemispheres
77.6
2378
Male, age 80, both hemispheres
73.4
Dorsal tegmental nucleus nTPM: 92.2
2358
Male, age 61, both hemispheres
105.3
1936
Male, age 76, left hemisphere
99.3
2083
Male, age 80, both hemispheres
88.3
2326
Male, age 74, both hemispheres
75.7
Dorsolateral tegmental area nTPM: 76.4
2337
Male, age 61, both hemispheres
91.3
2141
Male, age 76, both hemispheres
83.1
2654
Male, age 80, both hemispheres
79.7
2360
Male, age 74, both hemispheres
65.7
2751
Female, age 85, both hemispheres
62.0
Kolliker-Fuse nucleus nTPM: 101.6
2315
Male, age 76, right hemisphere
124.4
2793
Female, age 91, left hemisphere
103.4
2163
Male, age 80, both hemispheres
77.1
Lateral lemniscal nuclei nTPM: 83.7
2169
Male, age 76, both hemispheres
102.3
2746
Female, age 85, left hemisphere
83.5
2320
Female, age 91, left hemisphere
83.0
2453
Male, age 74, right hemisphere
82.3
2036
Male, age 80, both hemispheres
67.4
Lateral parabrachial nucleus nTPM: 91.1
2792
Male, age 76, both hemispheres
109.9
2139
Female, age 85, right hemisphere
97.7
2013
Male, age 80, both hemispheres
88.5
2790
Male, age 61, both hemispheres
68.2
Lateral vestibular nucleus nTPM: 75.6
2184
Male, age 76, both hemispheres
77.2
2311
Male, age 80, both hemispheres
74.0
Locus coeruleus nTPM: 100.7
2788
Male, age 74, unknown
115.7
2014
Male, age 55, unknown
106.9
2123
Female, age 91, both hemispheres
101.8
2162
Male, age 80, both hemispheres
101.1
2720
Male, age 74, both hemispheres
100.9
2317
Female, age 72, unknown
89.8
1980
Male, age 76, both hemispheres
88.8
Medial parabrachial nucleus nTPM: 84.2
2854
Male, age 80, both hemispheres
99.5
2786
Male, age 76, both hemispheres
88.7
2170
Female, age 91, both hemispheres
84.8
2156
Male, age 61, both hemispheres
74.7
2463
Female, age 85, right hemisphere
73.3
Medial periolivary nuclei nTPM: 91.6
2171
Female, age 85, both hemispheres
121.1
2063
Male, age 76, both hemispheres
102.7
2458
Female, age 91, both hemispheres
88.9
2081
Male, age 80, both hemispheres
80.2
2791
Male, age 74, right hemisphere
65.2
Motor facial nucleus nTPM: 96.2
2697
Female, age 85, both hemispheres
119.1
2327
Male, age 80, both hemispheres
114.0
2795
Female, age 91, both hemispheres
103.0
2062
Male, age 76, both hemispheres
98.4
2365
Male, age 74, right hemisphere
77.3
2126
Male, age 61, both hemispheres
65.6
Motor trigeminal nucleus nTPM: 85.3
2309
Male, age 76, both hemispheres
99.3
2321
Female, age 91, both hemispheres
90.1
2079
Male, age 80, both hemispheres
84.6
2335
Male, age 61, both hemispheres
81.5
2560
Male, age 74, both hemispheres
70.9
Nuclei of the trapezoid body nTPM: 97.3
2166
Male, age 80, both hemispheres
104.3
2159
Male, age 61, both hemispheres
101.3
2368
Female, age 91, both hemispheres
96.3
1983
Male, age 76, both hemispheres
93.8
2735
Female, age 85, both hemispheres
90.9
Nucleus raphe magnus nTPM: 102.3
2172
Female, age 85, both hemispheres
133.9
2328
Male, age 80, both hemispheres
110.1
2160
Male, age 61, both hemispheres
110.0
2051
Male, age 76, both hemispheres
91.0
2459
Female, age 91, both hemispheres
86.7
2455
Male, age 74, both hemispheres
82.0
Paramedian reticular nucleus nTPM: 89.4
2050
Female, age 85, both hemispheres
103.2
2313
Male, age 61, both hemispheres
99.3
2052
Male, age 76, both hemispheres
87.6
2057
Male, age 80, both hemispheres
67.5
Pedunculopontine tegmental nucleus nTPM: 95.3
2334
Male, age 80, both hemispheres
102.4
2338
Male, age 61, both hemispheres
94.6
1921
Female, age 85, both hemispheres
89.0
Pontine nuclei nTPM: 83.1
2787
Female, age 85, both hemispheres
99.2
1863
Male, age 55, unknown
98.7
1968
Male, age 76, left hemisphere
93.0
2727
Male, age 61, right hemisphere
82.6
2115
Male, age 80, left hemisphere
81.1
2109
Female, age 72, unknown
74.2
2454
Male, age 74, left hemisphere
70.7
2319
Female, age 91, both hemispheres
65.6
Pontine raphe nucleus nTPM: 94.7
2122
Female, age 85, midline
96.9
2853
Male, age 76, midline
92.5
Posteroventral cochlear nucleus nTPM: 71.6
2752
Female, age 85, both hemispheres
78.6
2371
Male, age 61, both hemispheres
75.8
2070
Male, age 76, both hemispheres
72.3
2341
Male, age 80, both hemispheres
72.3
2135
Female, age 91, both hemispheres
59.0
Principal sensory trigeminal nucleus nTPM: 92.2
2158
Male, age 61, both hemispheres
100.7
2324
Male, age 76, both hemispheres
92.8
2008
Male, age 80, left hemisphere
88.9
2367
Female, age 91, left hemisphere
86.3
Reticular pontine nucleus, caudal nTPM: 86.7
2332
Male, age 80, right hemisphere
103.6
2457
Female, age 91, both hemispheres
94.1
2092
Male, age 76, both hemispheres
88.8
2559
Male, age 74, both hemispheres
60.4
Reticular pontine nucleus, oral nTPM: 86.5
2366
Female, age 91, both hemispheres
91.9
2012
Female, age 85, both hemispheres
91.7
2167
Male, age 76, both hemispheres
88.4
2361
Male, age 74, both hemispheres
83.0
1939
Male, age 80, both hemispheres
77.3
Reticulotegmental nucleus nTPM: 93.9
2322
Female, age 91, both hemispheres
112.4
2325
Male, age 76, both hemispheres
96.8
2333
Male, age 80, both hemispheres
90.9
2452
Male, age 74, both hemispheres
75.5
Spinal trigeminal nucleus, oral nTPM: 75.7
1978
Male, age 76, both hemispheres
80.8
2164
Male, age 80, both hemispheres
75.8
2737
Female, age 85, both hemispheres
70.5
Subcoeruleus area nTPM: 85.5
1958
Male, age 80, both hemispheres
97.6
2323
Female, age 91, left hemisphere
96.8
2089
Male, age 76, left hemisphere
89.0
2451
Male, age 74, both hemispheres
78.0
2369
Female, age 85, left hemisphere
66.3
Superior olive nTPM: 94.1
2561
Female, age 91, both hemispheres
111.9
2329
Male, age 80, right hemisphere
108.6
1875
Female, age 85, both hemispheres
100.1
2020
Male, age 76, both hemispheres
89.4
2364
Male, age 74, right hemisphere
60.6
Ventral periolivary nuclei nTPM: 100.8
2165
Male, age 80, both hemispheres
107.6
2130
Female, age 85, both hemispheres
106.0
2023
Male, age 76, both hemispheres
96.2
2794
Female, age 91, left hemisphere
93.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 89.6
1959
Male, age 76, both hemispheres
105.7
2359
Male, age 61, both hemispheres
91.6
2840
Female, age 85, both hemispheres
91.3
2161
Male, age 80, both hemispheres
88.5
2449
Male, age 74, both hemispheres
85.8
2456
Female, age 91, both hemispheres
75.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
