HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:12.3 nTPM
HPA Brain:74.4 nTPM
GTEx:12.3 nTPM
FANTOM5:185.1 Scaled Tags Per Million
Pig:32.3 nTPM
Mouse:45.0 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011220
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 74.4
Sample id Sample description nTPM
Hippocampus
nTPM: 38.1
2529 Female, age 94, left hemisphere 51.9
2621 Female, age 67, right hemisphere 39.7
1898 Male, age 80, left hemisphere 38.0
1911 Female, age 85, right hemisphere 36.9
2148 Female, age 91, left hemisphere 34.6
1855 Male, age 76, left hemisphere 27.6
Dentate gyrus
nTPM: 36.1
2530 Female, age 94, left hemisphere 42.9
2528 Male, age 74, both hemispheres 41.9
2246 Female, age 85, both hemispheres 36.3
2010 Male, age 76, both hemispheres 33.7
1927 Female, age 91, both hemispheres 30.9
2531 Female, age 67, both hemispheres 30.6
Entorhinal gyrus
nTPM: 74.4
1787 Male, age 76, left hemisphere 87.4
2613 Female, age 94, left hemisphere 83.8
1938 Female, age 85, left hemisphere 82.4
2764 Male, age 80, right hemisphere 74.5
2117 Female, age 91, right hemisphere 65.1
2686 Male, age 75, right hemisphere 53.1
Hippocampus, CA1
nTPM: 41.1
2749 Male, age 80, left hemisphere 62.4
2527 Male, age 74, both hemispheres 52.0
2082 Female, age 91, right hemisphere 43.6
1873 Female, age 85, both hemispheres 29.2
2045 Male, age 76, both hemispheres 18.2
Hippocampus, CA2
nTPM: 42.5
2437 Female, age 94, left hemisphere 52.7
2113 Female, age 91, right hemisphere 43.8
1892 Male, age 76, both hemispheres 42.9
2249 Male, age 74, both hemispheres 41.8
1963 Male, age 80, left hemisphere 40.1
1940 Female, age 85, left hemisphere 33.4
Hippocampus, CA3
nTPM: 35.4
1867 Male, age 76, both hemispheres 45.7
1891 Female, age 85, both hemispheres 44.4
2137 Male, age 80, left hemisphere 35.8
2436 Male, age 74, both hemispheres 35.2
2861 Female, age 67, both hemispheres 32.2
2620 Female, age 94, left hemisphere 19.0
Parahippocampal cortex
nTPM: 61.7
1850 Male, age 80, both hemispheres 77.4
2692 Male, age 74, both hemispheres 74.3
1990 Female, age 91, right hemisphere 69.6
2622 Female, age 67, right hemisphere 69.0
2532 Female, age 72, left hemisphere 63.4
1933 Female, age 85, both hemispheres 61.6
2250 Female, age 67, right hemisphere 56.7
2693 Female, age 94, both hemispheres 51.8
2245 Female, age 91, both hemispheres 51.1
2018 Male, age 76, both hemispheres 42.4
Perirhinal gyrus
nTPM: 69.0
2848 Male, age 76, right hemisphere 75.9
1847 Female, age 91, left hemisphere 74.8
1794 Male, age 80, right hemisphere 74.3
1841 Female, age 85, right hemisphere 62.2
2521 Female, age 94, right hemisphere 57.5
Subiculum
nTPM: 58.0
1977 Female, age 85, both hemispheres 69.7
2438 Female, age 94, left hemisphere 69.3
2619 Male, age 74, both hemispheres 68.3
1901 Male, age 80, both hemispheres 54.7
2042 Male, age 76, both hemispheres 51.2
2729 Female, age 91, right hemisphere 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.3
Samples: 197

Max nTPM: 30.3
Min nTPM: 4.5
Std nTPM: 4.1
Median nTPM: 11.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 30.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 24.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 23.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 20.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 20.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 20.1
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 20.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 19.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 19.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 185.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 185.1
FF:10153-102I9 76 years, female 243.6
FF:10169-103B7 60 years, female 126.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.3
Pig sample Sample description nTPM
Subiculum
nTPM: 32.1
Samples: 4

Max nTPM: 44.6
Min nTPM: 25.4
Sample A Female 44.6
Sample B Female 28.8
Sample C Male 29.5
Sample D Male 25.4
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 28.2
Min nTPM: 16.7
Sample A Female 24.2
Sample B Female 19.0
Sample C Male 28.2
Sample D Male 16.7
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 34.6
Min nTPM: 29.9
Sample A Female 29.9
Sample B Female 30.3
Sample C Male 34.4
Sample D Male 34.6
Ventral hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 27.0
Min nTPM: 18.9
Sample A Female 23.8
Sample B Female 18.9
Sample C Male 27.0
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 45.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.1
Samples: 4

Max nTPM: 49.0
Min nTPM: 36.2
Sample A Male 47.5
Sample B Male 49.0
Sample C Female 36.2
Sample D Female 47.5
Hippocampal formation
nTPM: 26.5
Samples: 4

Max nTPM: 27.9
Min nTPM: 25.3
Sample A Male 27.9
Sample B Male 27.0
Sample C Female 25.3
Sample D Female 25.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
71668995 Antisense, RP_050607_02_B06, Mouse strain C57BL/6J (56 days, male) 12.4

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