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  • FAM13A
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:22.7 nTPM
HPA:22.7 nTPM
GTEx:9.7 nTPM
FANTOM5:36.0 Scaled Tags Per Million

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038108Antibody HPA038109
Glandular cells MediumMedium


SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.7
overview
Female, age 68
Salivary gland sample 216
nTPM: 16.9
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 24.1
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 27.2
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.7
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 9.7
Samples: 162

Max nTPM: 20.6
Min nTPM: 4.6
Std nTPM: 2.4
Median nTPM: 9.7
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 20.6
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 16.4
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 15.7
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 14.4
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 14.1
GTEX-1B932-0626-SM-731EM 40-49 years, female 14.0
GTEX-1R9PM-1726-SM-E8VOA 20-29 years, male 13.7
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 13.4
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 13.4
GTEX-1445S-2926-SM-5O993 60-69 years, male 13.3
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 13.3
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 13.1
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 13.1
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 13.0
GTEX-13113-1526-SM-5EGHV 60-69 years, female 12.6
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 12.6
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 12.4
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 12.4
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 12.4
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 12.3
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 12.3
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 12.3
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 12.3
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 12.1
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 11.9
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 11.9
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 11.9
GTEX-13O21-1926-SM-5MR39 50-59 years, male 11.8
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 11.8
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 11.8
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 11.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 11.6
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 11.6
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 11.5
GTEX-Y111-2626-SM-4TT24 50-59 years, male 11.3
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 11.3
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 11.3
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 11.2
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 11.2
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 11.2
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 11.1
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 11.0
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 11.0
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 11.0
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 11.0
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 10.9
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 10.9
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 10.8
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 10.7
GTEX-146FR-1226-SM-5SIA7 60-69 years, female 10.7
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 10.7
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 10.7
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 10.6
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 10.6
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 10.6
GTEX-15SHV-2226-SM-6M464 60-69 years, male 10.5
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 10.5
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 10.5
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 10.4
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 10.3
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 10.3
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 10.2
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 10.2
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 10.2
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 10.1
GTEX-178AV-1426-SM-6LLID 40-49 years, male 10.1
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 10.1
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 10.0
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 10.0
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 10.0
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 10.0
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 10.0
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 10.0
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 9.9
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 9.9
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 9.9
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 9.9
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 9.9
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 9.8
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 9.7
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 9.7
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 9.7
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 9.7
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 9.7
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 9.6
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 9.5
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 9.5
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 9.4
GTEX-WOFM-2126-SM-4OOSR 20-29 years, male 9.4
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 9.4
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 9.3
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 9.3
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 9.2
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 9.1
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 9.1
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 9.1
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 9.1
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 9.0
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 8.9
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 8.8
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 8.8
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 8.7
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 8.7
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 8.7
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 8.6
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 8.6
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 8.6
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 8.6
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 8.6
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 8.6
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 8.5
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 8.5
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 8.5
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 8.5
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 8.4
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 8.4
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 8.4
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 8.3
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 8.3
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 8.3
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 8.3
GTEX-11P82-0926-SM-5986X 20-29 years, male 8.2
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 8.2
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 8.2
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 8.2
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 8.1
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 8.1
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 8.0
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 7.9
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 7.8
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 7.8
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 7.8
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 7.7
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 7.7
GTEX-ZQG8-2126-SM-4YCF1 60-69 years, female 7.7
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 7.4
GTEX-X261-2426-SM-4PQZU 50-59 years, male 7.4
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 7.4
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 7.4
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 7.3
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 7.3
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 7.2
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 7.0
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 7.0
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 7.0
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 6.8
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 6.8
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 6.7
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 6.2
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 6.1
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 6.0
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 6.0
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 6.0
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 5.9
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 5.9
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 5.4
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 5.1
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 4.9
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 4.7
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 4.7
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 4.7
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 4.6
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

36.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 36.0
FF:10199-103F1 23 years, male 36.0
Salivary gland
Scaled Tags Per Million: 29.0
FF:10093-102C3 16-60 years, mixed 29.0
Submaxillary gland
Scaled Tags Per Million: 31.0
FF:10202-103F4 24 years, male 31.0

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