HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:43.2 nTPM
HPA Brain:125.1 nTPM
GTEx:43.2 nTPM
FANTOM5:222.0 Scaled Tags Per Million
Pig:108.3 nTPM
Mouse:47.8 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039875
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 125.1
Sample id Sample description nTPM
Hippocampus
nTPM: 103.9
1911 Female, age 85, right hemisphere 116.8
2529 Female, age 94, left hemisphere 108.4
2621 Female, age 67, right hemisphere 105.0
1898 Male, age 80, left hemisphere 102.6
1855 Male, age 76, left hemisphere 97.4
2148 Female, age 91, left hemisphere 92.9
Dentate gyrus
nTPM: 100.8
2530 Female, age 94, left hemisphere 126.3
2010 Male, age 76, both hemispheres 117.5
1927 Female, age 91, both hemispheres 92.9
2531 Female, age 67, both hemispheres 90.4
2246 Female, age 85, both hemispheres 90.0
2528 Male, age 74, both hemispheres 87.7
Entorhinal gyrus
nTPM: 111.7
2117 Female, age 91, right hemisphere 139.9
2686 Male, age 75, right hemisphere 117.7
2764 Male, age 80, right hemisphere 115.0
1938 Female, age 85, left hemisphere 105.6
2613 Female, age 94, left hemisphere 97.6
1787 Male, age 76, left hemisphere 94.5
Hippocampus, CA1
nTPM: 103.7
2749 Male, age 80, left hemisphere 122.7
2045 Male, age 76, both hemispheres 113.2
2527 Male, age 74, both hemispheres 98.9
1873 Female, age 85, both hemispheres 97.4
2082 Female, age 91, right hemisphere 86.3
Hippocampus, CA2
nTPM: 99.2
1963 Male, age 80, left hemisphere 114.8
2249 Male, age 74, both hemispheres 107.7
1892 Male, age 76, both hemispheres 95.3
2437 Female, age 94, left hemisphere 95.2
2113 Female, age 91, right hemisphere 91.9
1940 Female, age 85, left hemisphere 90.5
Hippocampus, CA3
nTPM: 93.6
1891 Female, age 85, both hemispheres 117.8
2137 Male, age 80, left hemisphere 112.9
1867 Male, age 76, both hemispheres 108.3
2436 Male, age 74, both hemispheres 82.7
2620 Female, age 94, left hemisphere 78.2
2861 Female, age 67, both hemispheres 61.6
Parahippocampal cortex
nTPM: 97.0
1850 Male, age 80, both hemispheres 119.2
2532 Female, age 72, left hemisphere 111.2
1990 Female, age 91, right hemisphere 109.9
2018 Male, age 76, both hemispheres 103.3
2692 Male, age 74, both hemispheres 102.2
2245 Female, age 91, both hemispheres 101.1
1933 Female, age 85, both hemispheres 96.5
2693 Female, age 94, both hemispheres 80.0
2622 Female, age 67, right hemisphere 76.3
2250 Female, age 67, right hemisphere 70.7
Perirhinal gyrus
nTPM: 95.9
1847 Female, age 91, left hemisphere 102.1
1794 Male, age 80, right hemisphere 100.7
1841 Female, age 85, right hemisphere 97.7
2848 Male, age 76, right hemisphere 93.4
2521 Female, age 94, right hemisphere 85.6
Subiculum
nTPM: 125.1
2438 Female, age 94, left hemisphere 157.3
2042 Male, age 76, both hemispheres 146.8
1901 Male, age 80, both hemispheres 137.2
1977 Female, age 85, both hemispheres 118.5
2619 Male, age 74, both hemispheres 97.0
2729 Female, age 91, right hemisphere 93.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.2
Samples: 197

Max nTPM: 113.8
Min nTPM: 9.9
Std nTPM: 18.9
Median nTPM: 37.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 113.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 106.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 105.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 103.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 99.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 92.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 92.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 88.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 85.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 81.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 73.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 222.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 222.0
FF:10169-103B7 60 years, female 267.9
FF:10153-102I9 76 years, female 176.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 108.3
Pig sample Sample description nTPM
Subiculum
nTPM: 74.6
Samples: 4

Max nTPM: 83.0
Min nTPM: 66.7
Sample A Female 83.0
Sample B Female 71.6
Sample C Male 66.7
Sample D Male 77.2
Dorsal hippocampus
nTPM: 108.3
Samples: 4

Max nTPM: 137.4
Min nTPM: 74.1
Sample A Female 126.5
Sample B Female 95.1
Sample C Male 137.4
Sample D Male 74.1
Entorhinal cortex
nTPM: 74.7
Samples: 4

Max nTPM: 79.9
Min nTPM: 70.6
Sample A Female 73.9
Sample B Female 79.9
Sample C Male 70.6
Sample D Male 74.5
Ventral hippocampus
nTPM: 82.8
Samples: 4

Max nTPM: 114.9
Min nTPM: 62.9
Sample A Female 89.8
Sample B Female 62.9
Sample C Male 63.6
Sample D Male 114.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 47.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.8
Samples: 4

Max nTPM: 45.0
Min nTPM: 38.2
Sample A Male 45.0
Sample B Male 40.7
Sample C Female 38.2
Sample D Female 39.2
Hippocampal formation
nTPM: 47.8
Samples: 4

Max nTPM: 59.3
Min nTPM: 39.8
Sample A Male 39.8
Sample B Male 50.2
Sample C Female 59.3
Sample D Female 41.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70203615 Antisense, RP_050519_02_A05, Mouse strain C57BL/6J (56 days, male) 3.4

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