HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:16.4 nTPM
HPA Brain:33.4 nTPM
GTEx:16.4 nTPM
FANTOM5:100.9 Scaled Tags Per Million
Pig:60.5 nTPM
Mouse:20.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057469
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 33.4
2529 Female, age 94, left hemisphere 40.4
2621 Female, age 67, right hemisphere 37.1
1898 Male, age 80, left hemisphere 34.2
1911 Female, age 85, right hemisphere 30.2
2148 Female, age 91, left hemisphere 30.0
1855 Male, age 76, left hemisphere 28.1
Dentate gyrus
nTPM: 32.1
2530 Female, age 94, left hemisphere 36.2
2246 Female, age 85, both hemispheres 34.3
2531 Female, age 67, both hemispheres 34.0
2010 Male, age 76, both hemispheres 32.7
2528 Male, age 74, both hemispheres 27.8
1927 Female, age 91, both hemispheres 27.3
Entorhinal gyrus
nTPM: 31.2
2686 Male, age 75, right hemisphere 35.8
2117 Female, age 91, right hemisphere 33.3
1938 Female, age 85, left hemisphere 31.8
1787 Male, age 76, left hemisphere 29.7
2613 Female, age 94, left hemisphere 28.9
2764 Male, age 80, right hemisphere 27.6
Hippocampus, CA1
nTPM: 31.9
2527 Male, age 74, both hemispheres 38.3
1873 Female, age 85, both hemispheres 32.4
2045 Male, age 76, both hemispheres 31.6
2749 Male, age 80, left hemisphere 31.6
2082 Female, age 91, right hemisphere 25.6
Hippocampus, CA2
nTPM: 28.7
1892 Male, age 76, both hemispheres 32.6
2249 Male, age 74, both hemispheres 30.9
2437 Female, age 94, left hemisphere 30.2
1940 Female, age 85, left hemisphere 29.8
2113 Female, age 91, right hemisphere 25.1
1963 Male, age 80, left hemisphere 23.8
Hippocampus, CA3
nTPM: 30.5
2861 Female, age 67, both hemispheres 32.8
2436 Male, age 74, both hemispheres 31.4
2620 Female, age 94, left hemisphere 31.4
2137 Male, age 80, left hemisphere 30.1
1867 Male, age 76, both hemispheres 28.9
1891 Female, age 85, both hemispheres 28.4
Parahippocampal cortex
nTPM: 33.4
2245 Female, age 91, both hemispheres 41.7
2622 Female, age 67, right hemisphere 37.3
2532 Female, age 72, left hemisphere 35.8
2250 Female, age 67, right hemisphere 33.8
2018 Male, age 76, both hemispheres 32.9
1850 Male, age 80, both hemispheres 32.0
2692 Male, age 74, both hemispheres 31.4
1933 Female, age 85, both hemispheres 30.7
2693 Female, age 94, both hemispheres 30.3
1990 Female, age 91, right hemisphere 27.7
Perirhinal gyrus
nTPM: 29.6
2521 Female, age 94, right hemisphere 32.5
1841 Female, age 85, right hemisphere 31.8
2848 Male, age 76, right hemisphere 31.5
1794 Male, age 80, right hemisphere 28.1
1847 Female, age 91, left hemisphere 24.0
Subiculum
nTPM: 32.6
2438 Female, age 94, left hemisphere 40.9
2042 Male, age 76, both hemispheres 34.4
2619 Male, age 74, both hemispheres 32.9
1901 Male, age 80, both hemispheres 32.8
1977 Female, age 85, both hemispheres 30.5
2729 Female, age 91, right hemisphere 24.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.4
Samples: 197

Max nTPM: 38.0
Min nTPM: 8.8
Std nTPM: 3.5
Median nTPM: 16.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 38.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 32.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 26.7
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 26.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 26.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 25.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 22.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 21.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 21.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 100.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.9
FF:10169-103B7 60 years, female 120.4
FF:10153-102I9 76 years, female 81.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 60.5
Pig sample Sample description nTPM
Subiculum
nTPM: 57.8
Samples: 4

Max nTPM: 67.8
Min nTPM: 53.8
Sample A Female 67.8
Sample B Female 53.8
Sample C Male 53.9
Sample D Male 55.6
Dorsal hippocampus
nTPM: 60.5
Samples: 4

Max nTPM: 70.5
Min nTPM: 50.7
Sample A Female 61.0
Sample B Female 59.8
Sample C Male 70.5
Sample D Male 50.7
Entorhinal cortex
nTPM: 58.1
Samples: 4

Max nTPM: 59.0
Min nTPM: 56.4
Sample A Female 59.0
Sample B Female 58.6
Sample C Male 58.4
Sample D Male 56.4
Ventral hippocampus
nTPM: 54.8
Samples: 4

Max nTPM: 62.3
Min nTPM: 45.0
Sample A Female 62.3
Sample B Female 58.2
Sample C Male 45.0
Sample D Male 53.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 22.0
Min nTPM: 18.0
Sample A Male 19.9
Sample B Male 22.0
Sample C Female 20.4
Sample D Female 18.0
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 21.1
Min nTPM: 18.6
Sample A Male 20.8
Sample B Male 21.1
Sample C Female 18.6
Sample D Female 19.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71920500 Antisense, RP_050915_02_B06, Mouse strain C57BL/6J (56 days, male) 0.2
73512516 Antisense, RP_050816_02_F06, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org