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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANXA7 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
172.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
150.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
143.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
139.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
130.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
129.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
123.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
122.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
111.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
111.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
109.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
108.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
104.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
104.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
102.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
101.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
101.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
100.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
100.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
99.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
99.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
96.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
94.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
94.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
94.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
93.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
93.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
93.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
92.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
92.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
91.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
90.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
90.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
89.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
89.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
88.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
88.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
87.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
86.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
86.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
86.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
85.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
85.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
85.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
85.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
84.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
84.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
84.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
84.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
84.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
84.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
83.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
83.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
83.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
83.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
83.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
82.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
82.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
82.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
82.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
81.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
81.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
81.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
80.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
79.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
79.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
78.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
77.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
76.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
76.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
76.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
76.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
76.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
75.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
75.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
75.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
75.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
74.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
74.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
74.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
74.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
74.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
74.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
74.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
74.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
73.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
73.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
73.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
72.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
72.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
72.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
72.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
72.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
71.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
71.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
71.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
71.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
70.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
70.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
69.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
69.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
69.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
69.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
69.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
68.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
68.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
67.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
67.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
67.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
67.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
67.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
66.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
66.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
66.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
66.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
66.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
66.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
66.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
66.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
65.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
65.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
65.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
65.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
64.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
64.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
64.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
64.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
64.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
64.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
64.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
63.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
63.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
63.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
63.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
63.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
63.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
63.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
63.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
62.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
62.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
62.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
62.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
61.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
61.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
61.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
61.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
61.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
60.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
60.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
60.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
60.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
60.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
60.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
59.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
59.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
59.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
59.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
59.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
59.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
59.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
59.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
59.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
59.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
58.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
58.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
58.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
57.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
57.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
57.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
57.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
57.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
57.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
56.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
56.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
56.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
56.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
56.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
56.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
56.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
56.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
56.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
56.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
56.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
55.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
55.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
55.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
55.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
55.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
55.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
55.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
54.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
54.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
54.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
54.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
54.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
54.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
53.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
53.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
53.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
53.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
53.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
53.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
53.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
53.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
53.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
53.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
53.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
53.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
52.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
52.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
52.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
52.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
52.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
51.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
51.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
51.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
50.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
50.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
50.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
50.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
50.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
50.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
50.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
50.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
50.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
50.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
49.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
49.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
49.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
49.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
49.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
49.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
48.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
48.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
48.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
48.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
48.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
48.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
48.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
48.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
47.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
47.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
47.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
47.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
47.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
47.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
47.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
47.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
47.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
46.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
46.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
46.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
46.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
46.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
46.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
46.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
46.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
46.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
45.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
45.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
45.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
45.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
45.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
45.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
44.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
44.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
43.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
43.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
43.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
43.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
43.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
43.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
43.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
43.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
42.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
42.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
42.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
42.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
41.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
41.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
41.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
41.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
41.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
41.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
40.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
40.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
40.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
40.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
39.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
39.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
39.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
39.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
39.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
39.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
39.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
39.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
39.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
38.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
38.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
38.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
38.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
38.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
38.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
38.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
37.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
37.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
36.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
36.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
36.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
36.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
35.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
35.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
35.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
35.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
34.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
34.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
33.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
33.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
33.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
32.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
32.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
31.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
31.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
30.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
30.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
30.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
30.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
30.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
30.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
29.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
29.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
28.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
27.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
27.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
25.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
24.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
24.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
23.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
22.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
22.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
22.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
22.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
22.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
21.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
20.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
19.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
19.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
17.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
17.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
17.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
17.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
16.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
16.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
15.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
15.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
14.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
14.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
13.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
9.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
8.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANXA7 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.7
Number of samples
231
Samples
Sample
Description
TPM
DO45171
0 years, male, NA, stage:3, alive, 600 days
125.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
119.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
118.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
116.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
109.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
108.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
108.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
107.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
104.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
104.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
103.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
103.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
102.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
100.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
100.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
97.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
96.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
95.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
95.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
94.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
94.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
93.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
92.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
91.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
91.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
91.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
90.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
90.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
89.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
88.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
88.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
88.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
87.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
87.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
86.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
85.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
85.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
85.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
85.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
85.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
85.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
84.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
84.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
82.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
82.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
82.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
82.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
81.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
81.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
80.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
80.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
79.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
78.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
78.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
77.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
77.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
77.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
77.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
76.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
76.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
75.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
74.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
74.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
74.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
73.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
73.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
73.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
73.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
73.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
73.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
73.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
72.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
72.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
72.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
72.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
72.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
71.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
71.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
70.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
69.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
69.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
69.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
68.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
68.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
67.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
67.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
67.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
66.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
66.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
66.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
66.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
66.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
66.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
66.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
65.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
65.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
65.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
65.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
65.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
65.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
65.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
64.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
64.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
64.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
64.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
64.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
63.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
63.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
63.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
63.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
62.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
62.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
62.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
62.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
62.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
62.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
61.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
61.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
60.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
60.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
60.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
60.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
60.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
60.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
59.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
59.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
59.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
58.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
58.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
58.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
58.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
58.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
58.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
58.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
57.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
57.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
57.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
57.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
57.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
56.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
55.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
55.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
55.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
55.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
55.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
54.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
54.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
54.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
54.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
54.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
54.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
53.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
53.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
53.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
53.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
52.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
52.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
52.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
52.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
52.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
52.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
52.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
52.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
51.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
51.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
51.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
51.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
51.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
51.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
51.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
51.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
50.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
50.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
50.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
49.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
49.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
49.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
48.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
48.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
48.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
48.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
48.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
47.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
47.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
47.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
47.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
46.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
46.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
46.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
46.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
45.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
44.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
44.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
44.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
43.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
43.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
43.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
42.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
40.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
40.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
39.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
39.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
39.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
39.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
39.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
38.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
38.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
38.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
37.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
36.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
34.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
34.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
34.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
34.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
34.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
34.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
34.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
32.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
32.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
32.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
31.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
31.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
31.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
30.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
30.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
29.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
26.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
22.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
19.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
16.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
14.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
685
Tumor
0.9
271
Tumor
0.8
431
Tumor
0.5
1025
Tumor
0.5
911
Tumor
0.5
921
Tumor
0.5
533
Tumor
0.5
327
Tumor
0.5
553
Tumor
0.4
481
Tumor
0.4
881
Tumor
0.4
741
Tumor
0.3
123
Tumor
0.3
221
Tumor
0.3
465
Tumor
0.3
171
Tumor
0.3
141
Tumor
0.3
1021
Tumor
0.3
1031
Tumor
0.3
714
Normal
0.3
937
Tumor
0.3
981
Tumor
0.3
817
Tumor
0.3
915
Tumor
0.3
443
Tumor
0.3
1027
Tumor
0.3
436
Normal
0.3
416
Normal
0.2
231
Tumor
0.2
966
Normal
0.2
755
Tumor
0.2
366
Normal
0.2
1026
Normal
0.2
745
Tumor
0.2
452
Normal
0.2
387
Tumor
0.2
127
Tumor
0.2
867
Tumor
0.2
222
Normal
0.2
721
Tumor
0.2
212
Normal
0.2
778
Normal
0.2
756
Normal
0.2
1043
Tumor
0.2
484
Normal
0.2
518
Normal
0.2
982
Normal
0.2
1022
Normal
0.2
415
Tumor
0.2
172
Normal
0.2
162
Normal
0.2
728
Normal
0.2
267
Tumor
0.2
861
Tumor
0.2
185
Tumor
0.2
464
Normal
0.2
477
Tumor
0.2
528
Normal
0.2
472
Normal
0.2
925
Tumor
0.2
641
Tumor
0.2
488
Normal
0.2
186
Normal
0.2
862
Normal
0.2
1042
Normal
0.2
526
Normal
0.2
471
Tumor
0.2
188
Normal
0.2
538
Normal
0.2
964
Normal
0.2
635
Tumor
0.2
878
Normal
0.2
568
Normal
0.2
314
Normal
0.2
272
Normal
0.2
386
Normal
0.2
978
Normal
0.2
455
Tumor
0.2
955
Tumor
0.2
558
Normal
0.2
818
Normal
0.2
192
Normal
0.2
132
Normal
0.2
882
Normal
0.2
956
Normal
0.2
746
Normal
0.2
298
Normal
0.2
716
Normal
0.2
278
Normal
0.2
642
Normal
0.1
695
Tumor
0.1
474
Normal
0.1
824
Normal
0.1
1014
Normal
0.1
916
Normal
0.1
482
Normal
0.1
332
Normal
0.1
1041
Tumor
0.1
147
Tumor
0.1
228
Normal
0.1
342
Normal
0.1
723
Tumor
0.1
414
Normal
0.1
1028
Normal
0.1
722
Normal
0.1
516
Normal
0.1
412
Normal
0.1
564
Normal
0.1
344
Normal
0.1
493
Tumor
0.1
686
Normal
0.1
364
Normal
0.1
958
Normal
0.1
977
Tumor
0.1
218
Normal
0.1
664
Normal
0.1
146
Normal
0.1
648
Normal
0.1
874
Normal
0.1
546
Normal
0.1
428
Normal
0.1
738
Normal
0.1
128
Normal
0.1
356
Normal
0.1
432
Normal
0.1
262
Normal
0.1
918
Normal
0.1
478
Normal
0.1
574
Normal
0.1
136
Normal
0.1
424
Normal
0.1
232
Normal
0.1
816
Normal
0.1
434
Normal
0.1
963
Tumor
0.1
148
Normal
0.1
952
Normal
0.1
1046
Normal
0.1
358
Normal
0.1
135
Tumor
0.1
944
Normal
0.1
912
Normal
0.1
615
Tumor
0.1
884
Normal
0.1
696
Normal
0.1
258
Normal
0.1
524
Normal
0.1
868
Normal
0.1
852
Normal
0.1
444
Normal
0.1
1044
Normal
0.1
214
Normal
0.1
421
Tumor
0.1
268
Normal
0.1
435
Tumor
0.1
448
Normal
0.1
1032
Normal
0.1
883
Tumor
0.1
857
Tumor
0.1
618
Normal
0.1
858
Normal
0.1
534
Normal
0.1
362
Normal
0.1
462
Normal
0.1
572
Normal
0.1
426
Normal
0.1
456
Normal
0.1
938
Normal
0.1
422
Normal
0.1
523
Tumor
0.1
411
Tumor
0.1
616
Normal
0.1
785
Tumor
0.1
376
Normal
0.1
494
Normal
0.1
451
Tumor
0.1
142
Normal
0.1
744
Normal
0.1
545
Tumor
0.1
498
Normal
0.1
617
Tumor
0.1
873
Tumor
0.1
742
Normal
0.1
864
Normal
0.1
698
Normal
0.1
514
Normal
0.1
786
Normal
0.1
492
Normal
0.0
423
Tumor
0.0
111
Normal
0.0
447
Tumor
0.0
662
Normal
0.0
114
Normal
0.0
124
Normal
0.0
284
Normal
0.0
984
Normal
0.0
297
Tumor
0.0
361
Tumor
0.0
823
Tumor
0.0
914
Normal
0.0
975
Tumor
0.0
394
Normal
0.0
126
Normal
0.0
112
Tumor
0.0
161
Tumor
0.0
392
Normal
0.0
227
Tumor
0.0
353
Tumor
0.0
328
Normal
0.0
697
Tumor
0.0
922
Normal
0.0
536
Normal
0.0
563
Tumor
0.0
388
Normal
0.0
363
Tumor
0.0
384
Normal
0.0
217
Tumor
0.0
666
Normal
0.0
286
Normal
0.0
917
Tumor
0.0
354
Normal
0.0
213
Tumor
0.0
513
Tumor
0.0
341
Tumor
0.0
352
Normal
0.0
483
Tumor
0.0
257
Tumor
0.0
368
Normal
0.0
224
Normal
0.0
463
Tumor
0.0
628
Normal
0.0
425
Tumor
0.0
196
Normal
0.0
466
Normal
0.0
427
Tumor
0.0
815
Tumor
0.0
395
Tumor
0.0
396
Normal
0.0
924
Normal
0.0
537
Tumor
0.0
331
Tumor
0.0
951
Tumor
-0.1
976
Normal
-0.1
191
Tumor
-0.1
413
Tumor
-0.1
557
Tumor
-0.1
647
Tumor
-0.1
312
Normal
-0.1
777
Tumor
-0.1
913
Tumor
-0.1
351
Tumor
-0.1
672
Normal
-0.1
573
Tumor
-0.1
138
Normal
-0.1
554
Normal
-0.1
277
Tumor
-0.1
355
Tumor
-0.1
983
Tumor
-0.1
571
Tumor
-0.1
113
Tumor
-0.1
661
Tumor
-0.1
187
Tumor
-0.1
926
Normal
-0.1
131
Tumor
-0.1
211
Tumor
-0.1
433
Tumor
-0.1
367
Tumor
-0.1
343
Tumor
-0.1
1016
Normal
-0.1
713
Tumor
-0.1
468
Normal
-0.1
261
Tumor
-0.1
125
Tumor
-0.1
145
Tumor
-0.1
473
Tumor
-0.1
446
Normal
-0.1
954
Normal
-0.1
223
Tumor
-0.1
385
Tumor
-0.2
467
Tumor
-0.2
525
Tumor
-0.2
877
Tumor
-0.2
814
Normal
-0.2
391
Tumor
-0.2
567
Tumor
-0.2
497
Tumor
-0.2
365
Tumor
-0.2
863
Tumor
-0.2
636
Normal
-0.2
357
Tumor
-0.2
517
Tumor
-0.2
527
Tumor
-0.2
953
Tumor
-0.2
535
Tumor
-0.2
813
Tumor
-0.2
445
Tumor
-0.2
515
Tumor
-0.2
715
Tumor
-0.2
311
Tumor
-0.2
737
Tumor
-0.3
393
Tumor
-0.3
491
Tumor
-0.3
851
Tumor
-0.3
727
Tumor
-0.3
965
Tumor
-0.3
195
Tumor
-0.3
1015
Tumor
-0.3
671
Tumor
-0.3
866
Normal
-0.3
285
Tumor
-0.3
923
Tumor
-0.3
375
Tumor
-0.4
461
Tumor
-0.4
383
Tumor
-0.4
743
Tumor
-0.4
665
Tumor
-0.4
137
Tumor
-0.4
1045
Tumor
-0.4
487
Tumor
-0.4
957
Tumor
-0.4
943
Tumor
-0.4
283
Tumor
-0.5
313
Tumor
-0.5
663
Tumor
-0.5
724
Normal
-0.5
968
Normal
-0.5
627
Tumor
-0.5
1013
Tumor
-0.6
865
Tumor
-0.8
967
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
