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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TACC2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
154.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
114.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
110.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
104.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
104.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
101.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
78.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
77.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
73.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
73.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
66.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
66.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
63.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
62.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
61.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
59.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
57.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
56.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
53.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
52.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
51.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
51.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
50.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
49.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
46.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
46.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
45.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
45.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
45.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
44.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
43.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
42.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
36.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
36.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
36.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
35.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
34.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
33.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
32.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
31.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
31.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
30.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
30.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
30.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
27.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
24.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
23.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
20.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
19.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
16.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TACC2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
108.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
69.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
60.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
56.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
51.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
48.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
43.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
41.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
40.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
38.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
37.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
36.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
35.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
34.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
32.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
32.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
32.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
32.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
30.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
30.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
29.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
29.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
29.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
29.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
29.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
28.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
28.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
28.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
28.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
27.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
26.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
26.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
25.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
25.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
25.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
25.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
25.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
25.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
24.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
24.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
24.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
23.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
23.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
23.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
23.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
22.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
22.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
21.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
21.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
20.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
20.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
20.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
19.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
19.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
19.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
18.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
18.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
17.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
17.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
17.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
17.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
16.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
16.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
16.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
16.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
14.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
14.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
14.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
14.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
14.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
13.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
12.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
12.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
11.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
10.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
10.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
10.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
9.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
9.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
9.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
9.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
8.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
7.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
7.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
7.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
6.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
5.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
5.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
5.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
5.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
5.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
3.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
3.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
3.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TACC2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
33.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
29.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
26.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
24.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
23.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
18.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
17.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
15.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
13.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
12.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
11.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
10.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
10.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
9.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
9.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
9.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
7.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
7.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
6.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
6.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
4.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
4.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
4.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TACC2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
169.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
137.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
100.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
80.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
76.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
74.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
71.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
70.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
67.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
67.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
66.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
65.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
64.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
59.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
56.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
55.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
54.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
54.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
54.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
52.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
51.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
51.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
50.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
50.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
49.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
49.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
49.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
48.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
47.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
46.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
46.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
46.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
46.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
45.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
45.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
44.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
43.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
43.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
41.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
39.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
38.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
38.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
38.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
38.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
37.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
36.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
36.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
35.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
35.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
35.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
34.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
33.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
33.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
33.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
33.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
33.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
32.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
31.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
31.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
31.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
31.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
30.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
30.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
29.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
29.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
29.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
29.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
29.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
29.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
28.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
28.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
28.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
28.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
28.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
28.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
28.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
27.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
27.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
27.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
26.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
26.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
26.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
25.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
25.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
24.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
24.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
24.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
24.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
24.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
23.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
23.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
22.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
22.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
22.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
22.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
22.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
22.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
22.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
21.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
21.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
21.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
21.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
20.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
20.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
20.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
19.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
19.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
18.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
18.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
17.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
16.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
16.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
14.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
12.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
10.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
10.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
9.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
9.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
9.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
6.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
4.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.5
CPT0002270011
Tumor
1.2
CPT0079180003
Tumor
1.0
CPT0078800003
Tumor
0.8
CPT0012370003
Tumor
0.8
CPT0011410003
Tumor
0.7
CPT0019130003
Tumor
0.6
CPT0001350001
Normal
0.5
CPT0007870001
Normal
0.5
CPT0065750003
Tumor
0.5
CPT0086890003
Normal
0.4
CPT0001190001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0088920001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0086830003
Normal
0.4
CPT0012090003
Normal
0.4
CPT0009020003
Normal
0.4
CPT0026420001
Normal
0.4
CPT0014450004
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0078930003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0079510001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0001220008
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0078670001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0079430001
Normal
0.3
CPT0085670003
Tumor
0.3
CPT0012770003
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0092310003
Normal
0.3
CPT0026410003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0078530001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0012570003
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0012290003
Normal
0.2
CPT0063640001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0065430003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0065450001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0065820001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0064400001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0086870003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0079410003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0014160003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0075560003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0001540009
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0088480003
Tumor
-0.4
CPT0069000003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0092790003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0010110003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0092730003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0079480003
Tumor
-0.5
CPT0086030003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0081880003
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0012670003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0015730003
Tumor
-0.6
CPT0065690003
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0079380003
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0001260009
Tumor
-0.7
CPT0088550004
Tumor
-0.7
CPT0075130003
Tumor
-0.8
CPT0076330003
Tumor
-0.8
CPT0086950003
Tumor
-0.9
CPT0001340003
Tumor
-1.0
CPT0025230003
Tumor
-1.0
CPT0084560003
Tumor
-1.1
CPT0078990003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.