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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HADHB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
108.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
548.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
323.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
288.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
285.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
268.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
265.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
259.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
258.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
257.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
247.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
246.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
242.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
241.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
238.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
226.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
225.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
225.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
221.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
211.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
210.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
203.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
198.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
198.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
198.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
197.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
196.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
196.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
195.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
194.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
192.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
191.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
189.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
189.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
187.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
185.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
184.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
178.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
178.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
176.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
175.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
174.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
172.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
172.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
171.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
171.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
169.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
165.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
165.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
165.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
164.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
161.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
160.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
159.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
159.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
158.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
154.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
154.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
154.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
153.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
152.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
152.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
151.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
151.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
150.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
150.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
149.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
148.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
146.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
145.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
144.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
143.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
143.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
143.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
141.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
141.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
141.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
140.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
139.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
139.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
138.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
137.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
136.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
136.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
134.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
133.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
133.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
132.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
132.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
132.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
132.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
132.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
130.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
130.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
130.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
130.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
130.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
129.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
128.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
128.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
128.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
127.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
126.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
126.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
126.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
126.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
126.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
125.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
124.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
123.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
122.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
122.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
122.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
121.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
121.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
121.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
120.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
119.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
119.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
119.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
119.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
118.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
118.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
118.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
117.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
116.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
116.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
114.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
114.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
114.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
114.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
113.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
113.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
113.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
113.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
113.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
112.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
112.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
111.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
111.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
111.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
110.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
110.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
109.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
109.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
109.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
107.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
107.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
107.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
106.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
106.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
106.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
106.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
105.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
105.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
105.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
104.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
104.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
103.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
103.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
103.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
103.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
102.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
102.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
102.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
102.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
102.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
102.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
101.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
100.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
100.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
99.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
99.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
99.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
99.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
99.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
98.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
97.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
96.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
96.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
96.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
95.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
95.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
94.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
94.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
94.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
94.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
93.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
93.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
93.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
93.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
93.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
93.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
92.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
91.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
91.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
91.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
91.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
91.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
90.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
90.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
90.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
90.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
90.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
90.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
89.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
88.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
88.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
88.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
88.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
88.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
87.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
87.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
87.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
86.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
86.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
86.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
85.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
85.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
85.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
85.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
84.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
84.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
84.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
83.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
83.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
83.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
83.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
82.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
82.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
82.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
81.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
81.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
81.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
81.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
81.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
80.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
80.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
79.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
79.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
78.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
78.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
78.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
77.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
77.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
77.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
77.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
77.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
76.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
76.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
75.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
75.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
75.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
75.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
75.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
75.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
75.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
75.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
75.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
75.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
75.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
74.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
74.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
74.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
74.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
74.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
73.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
73.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
73.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
72.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
72.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
72.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
72.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
72.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
72.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
72.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
72.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
71.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
71.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
71.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
70.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
70.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
70.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
70.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
70.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
69.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
69.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
68.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
68.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
68.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
68.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
67.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
67.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
67.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
65.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
65.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
64.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
64.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
63.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
63.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
63.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
62.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
62.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
61.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
61.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
61.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
60.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
59.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
59.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
59.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
59.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
59.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
59.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
57.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
57.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
57.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
56.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
55.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
55.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
54.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
54.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
54.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
53.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
53.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
53.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
52.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
51.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
51.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
51.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
50.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
49.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
48.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
48.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
48.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
47.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
47.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
46.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
46.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
46.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
43.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
43.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
42.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
42.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
41.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
41.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
40.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
40.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
39.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
39.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
39.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
37.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
36.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
35.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
34.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
34.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
32.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
31.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
30.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
28.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
27.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
27.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
18.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HADHB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
117.7
Number of samples
231
Samples
Sample
Description
TPM
DO48757
0 years, female, NA, stage:3, alive, 480 days
501.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
300.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
269.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
261.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
258.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
251.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
241.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
234.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
231.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
231.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
230.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
223.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
218.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
216.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
211.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
208.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
207.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
202.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
201.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
201.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
200.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
194.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
193.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
181.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
180.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
175.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
173.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
173.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
172.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
171.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
170.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
168.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
168.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
166.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
164.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
164.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
164.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
163.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
163.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
163.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
162.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
160.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
159.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
159.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
157.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
157.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
156.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
156.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
155.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
152.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
150.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
149.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
149.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
149.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
149.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
147.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
146.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
146.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
146.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
145.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
144.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
144.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
143.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
141.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
139.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
139.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
136.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
135.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
134.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
134.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
133.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
132.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
131.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
130.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
130.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
129.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
129.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
128.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
127.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
127.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
127.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
127.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
126.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
126.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
125.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
123.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
123.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
123.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
121.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
121.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
119.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
118.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
118.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
117.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
116.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
116.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
116.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
115.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
115.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
114.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
114.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
113.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
113.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
112.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
112.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
112.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
111.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
111.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
111.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
110.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
109.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
109.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
109.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
107.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
107.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
106.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
106.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
106.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
105.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
104.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
104.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
103.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
103.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
103.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
103.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
101.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
101.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
101.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
101.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
100.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
99.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
99.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
98.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
97.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
96.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
96.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
95.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
94.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
94.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
93.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
92.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
92.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
91.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
91.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
90.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
90.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
90.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
89.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
89.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
88.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
88.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
86.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
86.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
85.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
85.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
85.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
84.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
84.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
83.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
83.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
82.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
82.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
81.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
81.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
81.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
81.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
81.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
81.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
80.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
80.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
80.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
79.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
79.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
79.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
79.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
78.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
78.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
77.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
77.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
76.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
76.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
75.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
74.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
74.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
73.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
73.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
72.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
72.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
71.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
71.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
70.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
70.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
69.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
68.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
67.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
67.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
67.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
66.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
66.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
66.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
65.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
64.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
63.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
63.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
62.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
62.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
62.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
61.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
61.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
61.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
60.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
60.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
58.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
57.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
56.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
56.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
55.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
54.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
54.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
54.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
53.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
53.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
49.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
48.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
48.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
46.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
44.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
40.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
40.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
39.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
35.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
925
Tumor
1.2
571
Tumor
1.0
627
Tumor
1.0
465
Tumor
0.9
393
Tumor
0.7
636
Normal
0.7
742
Normal
0.6
452
Normal
0.6
186
Normal
0.6
487
Tumor
0.6
924
Normal
0.5
818
Normal
0.5
488
Normal
0.5
534
Normal
0.5
1046
Normal
0.5
446
Normal
0.5
332
Normal
0.5
786
Normal
0.5
462
Normal
0.5
357
Tumor
0.5
698
Normal
0.5
746
Normal
0.5
128
Normal
0.5
568
Normal
0.5
868
Normal
0.4
723
Tumor
0.4
862
Normal
0.4
231
Tumor
0.4
922
Normal
0.4
984
Normal
0.4
964
Normal
0.4
528
Normal
0.4
944
Normal
0.4
616
Normal
0.4
423
Tumor
0.4
344
Normal
0.4
356
Normal
0.4
716
Normal
0.4
618
Normal
0.4
824
Normal
0.4
982
Normal
0.4
686
Normal
0.4
328
Normal
0.4
171
Tumor
0.4
738
Normal
0.4
1022
Normal
0.4
341
Tumor
0.4
412
Normal
0.4
436
Normal
0.4
426
Normal
0.4
278
Normal
0.4
572
Normal
0.4
526
Normal
0.4
358
Normal
0.4
873
Tumor
0.3
1045
Tumor
0.3
884
Normal
0.3
648
Normal
0.3
914
Normal
0.3
546
Normal
0.3
722
Normal
0.3
628
Normal
0.3
376
Normal
0.3
938
Normal
0.3
978
Normal
0.3
448
Normal
0.3
756
Normal
0.3
558
Normal
0.3
858
Normal
0.3
472
Normal
0.3
218
Normal
0.3
258
Normal
0.3
952
Normal
0.3
482
Normal
0.3
714
Normal
0.3
172
Normal
0.3
286
Normal
0.3
564
Normal
0.3
867
Tumor
0.3
388
Normal
0.3
428
Normal
0.3
354
Normal
0.3
424
Normal
0.3
232
Normal
0.3
298
Normal
0.3
394
Normal
0.3
1014
Normal
0.3
342
Normal
0.3
494
Normal
0.3
132
Normal
0.3
685
Tumor
0.3
162
Normal
0.3
515
Tumor
0.3
912
Normal
0.3
414
Normal
0.3
1026
Normal
0.3
778
Normal
0.3
866
Normal
0.3
976
Normal
0.3
1032
Normal
0.3
124
Normal
0.3
615
Tumor
0.3
148
Normal
0.3
864
Normal
0.3
484
Normal
0.2
538
Normal
0.2
926
Normal
0.2
127
Tumor
0.2
1044
Normal
0.2
968
Normal
0.2
745
Tumor
0.2
882
Normal
0.2
852
Normal
0.2
554
Normal
0.2
364
Normal
0.2
666
Normal
0.2
1016
Normal
0.2
352
Normal
0.2
883
Tumor
0.2
514
Normal
0.2
664
Normal
0.2
518
Normal
0.2
918
Normal
0.2
212
Normal
0.2
222
Normal
0.2
728
Normal
0.2
517
Tumor
0.2
314
Normal
0.2
816
Normal
0.2
196
Normal
0.2
696
Normal
0.2
477
Tumor
0.2
744
Normal
0.2
214
Normal
0.2
464
Normal
0.2
361
Tumor
0.2
954
Normal
0.2
396
Normal
0.2
392
Normal
0.2
956
Normal
0.2
468
Normal
0.2
435
Tumor
0.2
368
Normal
0.2
955
Tumor
0.2
362
Normal
0.2
416
Normal
0.2
878
Normal
0.2
755
Tumor
0.2
466
Normal
0.2
111
Normal
0.2
474
Normal
0.2
642
Normal
0.2
312
Normal
0.1
262
Normal
0.1
958
Normal
0.1
874
Normal
0.1
923
Tumor
0.1
1042
Normal
0.1
227
Tumor
0.1
142
Normal
0.1
713
Tumor
0.1
422
Normal
0.1
916
Normal
0.1
966
Normal
0.1
432
Normal
0.1
228
Normal
0.1
727
Tumor
0.1
114
Normal
0.1
524
Normal
0.1
1015
Tumor
0.1
513
Tumor
0.1
224
Normal
0.1
721
Tumor
0.1
1043
Tumor
0.0
516
Normal
0.0
284
Normal
0.0
366
Normal
0.0
662
Normal
0.0
146
Normal
0.0
126
Normal
0.0
461
Tumor
0.0
386
Normal
0.0
481
Tumor
0.0
785
Tumor
0.0
574
Normal
0.0
672
Normal
0.0
272
Normal
0.0
478
Normal
0.0
138
Normal
0.0
136
Normal
0.0
268
Normal
0.0
456
Normal
0.0
724
Normal
0.0
915
Tumor
0.0
145
Tumor
0.0
695
Tumor
0.0
434
Normal
0.0
635
Tumor
-0.1
1025
Tumor
-0.1
443
Tumor
-0.1
257
Tumor
-0.1
185
Tumor
-0.1
483
Tumor
-0.1
365
Tumor
-0.1
557
Tumor
-0.1
953
Tumor
-0.1
433
Tumor
-0.1
1041
Tumor
-0.1
415
Tumor
-0.1
261
Tumor
-0.1
857
Tumor
-0.1
913
Tumor
-0.1
384
Normal
-0.1
135
Tumor
-0.1
188
Normal
-0.1
951
Tumor
-0.1
327
Tumor
-0.2
451
Tumor
-0.2
492
Normal
-0.2
741
Tumor
-0.2
563
Tumor
-0.2
113
Tumor
-0.2
963
Tumor
-0.2
567
Tumor
-0.2
665
Tumor
-0.2
421
Tumor
-0.2
444
Normal
-0.2
498
Normal
-0.2
123
Tumor
-0.2
1027
Tumor
-0.2
191
Tumor
-0.2
536
Normal
-0.2
967
Tumor
-0.2
471
Tumor
-0.2
267
Tumor
-0.3
537
Tumor
-0.3
1031
Tumor
-0.3
533
Tumor
-0.3
427
Tumor
-0.3
911
Tumor
-0.3
363
Tumor
-0.3
981
Tumor
-0.3
491
Tumor
-0.3
112
Tumor
-0.3
1028
Normal
-0.3
411
Tumor
-0.3
553
Tumor
-0.4
192
Normal
-0.4
535
Tumor
-0.4
445
Tumor
-0.4
353
Tumor
-0.4
1021
Tumor
-0.4
271
Tumor
-0.4
523
Tumor
-0.4
391
Tumor
-0.4
137
Tumor
-0.4
823
Tumor
-0.4
195
Tumor
-0.4
187
Tumor
-0.4
217
Tumor
-0.4
383
Tumor
-0.4
617
Tumor
-0.4
641
Tumor
-0.4
297
Tumor
-0.4
447
Tumor
-0.4
387
Tumor
-0.4
527
Tumor
-0.5
493
Tumor
-0.5
813
Tumor
-0.5
715
Tumor
-0.5
147
Tumor
-0.5
777
Tumor
-0.5
921
Tumor
-0.5
863
Tumor
-0.5
937
Tumor
-0.5
851
Tumor
-0.5
943
Tumor
-0.5
697
Tumor
-0.5
223
Tumor
-0.5
125
Tumor
-0.5
161
Tumor
-0.6
425
Tumor
-0.6
525
Tumor
-0.6
743
Tumor
-0.6
814
Normal
-0.6
647
Tumor
-0.7
975
Tumor
-0.7
977
Tumor
-0.7
881
Tumor
-0.7
355
Tumor
-0.7
431
Tumor
-0.7
1013
Tumor
-0.7
367
Tumor
-0.7
141
Tumor
-0.7
861
Tumor
-0.7
221
Tumor
-0.8
815
Tumor
-0.8
573
Tumor
-0.8
737
Tumor
-0.8
983
Tumor
-0.8
455
Tumor
-0.8
817
Tumor
-0.8
473
Tumor
-0.8
313
Tumor
-0.8
395
Tumor
-0.8
917
Tumor
-0.9
497
Tumor
-0.9
413
Tumor
-0.9
213
Tumor
-0.9
343
Tumor
-0.9
467
Tumor
-0.9
965
Tumor
-0.9
957
Tumor
-0.9
663
Tumor
-1.0
311
Tumor
-1.0
277
Tumor
-1.0
545
Tumor
-1.0
463
Tumor
-1.0
131
Tumor
-1.0
351
Tumor
-1.1
877
Tumor
-1.1
331
Tumor
-1.1
285
Tumor
-1.2
375
Tumor
-1.2
671
Tumor
-1.2
385
Tumor
-1.3
283
Tumor
-1.3
661
Tumor
-1.4
865
Tumor
-1.5
211
Tumor
-1.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.