HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:15.0 nTPM
HPA Brain:25.3 nTPM
GTEx:15.0 nTPM
FANTOM5:44.6 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:48.9 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027982Antibody HPA028151
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.3
Sample id Sample description nTPM
Hippocampus
nTPM: 21.2
1898 Male, age 80, left hemisphere 27.5
2529 Female, age 94, left hemisphere 21.6
1855 Male, age 76, left hemisphere 21.1
2621 Female, age 67, right hemisphere 19.4
1911 Female, age 85, right hemisphere 19.0
2148 Female, age 91, left hemisphere 18.4
Dentate gyrus
nTPM: 20.7
2010 Male, age 76, both hemispheres 24.1
1927 Female, age 91, both hemispheres 23.2
2528 Male, age 74, both hemispheres 20.4
2246 Female, age 85, both hemispheres 19.5
2530 Female, age 94, left hemisphere 19.5
2531 Female, age 67, both hemispheres 17.7
Entorhinal gyrus
nTPM: 22.3
2764 Male, age 80, right hemisphere 25.2
1938 Female, age 85, left hemisphere 24.8
1787 Male, age 76, left hemisphere 22.9
2613 Female, age 94, left hemisphere 22.3
2117 Female, age 91, right hemisphere 20.0
2686 Male, age 75, right hemisphere 18.7
Hippocampus, CA1
nTPM: 23.6
2749 Male, age 80, left hemisphere 33.3
1873 Female, age 85, both hemispheres 22.7
2045 Male, age 76, both hemispheres 21.0
2082 Female, age 91, right hemisphere 20.5
2527 Male, age 74, both hemispheres 20.2
Hippocampus, CA2
nTPM: 22.5
1963 Male, age 80, left hemisphere 26.2
1892 Male, age 76, both hemispheres 25.4
2437 Female, age 94, left hemisphere 21.9
2249 Male, age 74, both hemispheres 21.2
2113 Female, age 91, right hemisphere 20.4
1940 Female, age 85, left hemisphere 19.7
Hippocampus, CA3
nTPM: 22.5
2137 Male, age 80, left hemisphere 26.8
1867 Male, age 76, both hemispheres 24.8
2436 Male, age 74, both hemispheres 22.9
1891 Female, age 85, both hemispheres 22.6
2620 Female, age 94, left hemisphere 21.4
2861 Female, age 67, both hemispheres 16.2
Parahippocampal cortex
nTPM: 22.9
1850 Male, age 80, both hemispheres 31.2
1990 Female, age 91, right hemisphere 25.6
2532 Female, age 72, left hemisphere 23.7
1933 Female, age 85, both hemispheres 23.5
2693 Female, age 94, both hemispheres 22.3
2250 Female, age 67, right hemisphere 22.0
2018 Male, age 76, both hemispheres 21.3
2245 Female, age 91, both hemispheres 20.9
2692 Male, age 74, both hemispheres 19.6
2622 Female, age 67, right hemisphere 18.7
Perirhinal gyrus
nTPM: 25.3
1847 Female, age 91, left hemisphere 29.3
1794 Male, age 80, right hemisphere 27.1
1841 Female, age 85, right hemisphere 24.6
2848 Male, age 76, right hemisphere 23.2
2521 Female, age 94, right hemisphere 22.3
Subiculum
nTPM: 20.9
1901 Male, age 80, both hemispheres 24.2
1977 Female, age 85, both hemispheres 24.1
2619 Male, age 74, both hemispheres 20.4
2042 Male, age 76, both hemispheres 20.2
2729 Female, age 91, right hemisphere 19.6
2438 Female, age 94, left hemisphere 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 28.5
Min nTPM: 8.2
Std nTPM: 4.0
Median nTPM: 13.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 28.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 25.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 25.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 24.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 24.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 24.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 23.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 23.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 22.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 22.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 44.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.6
FF:10169-103B7 60 years, female 56.0
FF:10153-102I9 76 years, female 33.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 24.4
Pig sample Sample description nTPM
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 31.0
Min nTPM: 20.5
Sample A Female 31.0
Sample B Female 21.5
Sample C Male 21.0
Sample D Male 20.5
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 32.9
Min nTPM: 19.4
Sample A Female 32.9
Sample B Female 21.1
Sample C Male 24.0
Sample D Male 19.4
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 27.9
Min nTPM: 19.1
Sample A Female 26.0
Sample B Female 27.9
Sample C Male 24.6
Sample D Male 19.1
Ventral hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 26.2
Min nTPM: 18.0
Sample A Female 26.2
Sample B Female 18.0
Sample C Male 23.6
Sample D Male 24.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 48.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.1
Samples: 4

Max nTPM: 52.1
Min nTPM: 43.7
Sample A Male 48.0
Sample B Male 52.1
Sample C Female 43.7
Sample D Female 44.4
Hippocampal formation
nTPM: 48.9
Samples: 4

Max nTPM: 58.1
Min nTPM: 42.3
Sample A Male 58.1
Sample B Male 49.2
Sample C Female 46.0
Sample D Female 42.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
583850 Antisense, RP_040831_01_B01, Mouse strain C57BL/6J (56 days, male) 8.1

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