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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
16.4
nTPM
GTEx:
26.0
nTPM
FANTOM5:
6.5
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
16.4
Sample id
Sample description
nTPM
Hippocampus nTPM: 16.4
1898
Male, age 80, left hemisphere
22.3
2529
Female, age 94, left hemisphere
19.0
1911
Female, age 85, right hemisphere
18.4
2621
Female, age 67, right hemisphere
17.2
2148
Female, age 91, left hemisphere
11.7
1855
Male, age 76, left hemisphere
10.1
HIPPOCAMPUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
26.0
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 26.0
Samples: 197
Max nTPM: 114.4
Min nTPM: 1.4
Std nTPM: 19.5
Median nTPM: 22.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
114.4
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
113.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
102.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
81.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
77.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
76.1
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
74.1
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
73.0
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
70.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
65.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
64.8
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
64.6
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
63.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
59.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
58.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
57.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
57.4
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
49.5
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
48.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
47.6
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
45.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
44.9
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
43.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
42.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
42.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
42.2
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
41.4
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
40.9
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
40.8
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
40.6
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
40.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
40.2
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
40.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
39.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
39.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
39.2
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
38.4
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
37.8
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
37.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
37.2
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
36.9
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
36.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
35.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
35.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
35.2
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
34.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
33.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
33.5
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
33.3
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
33.1
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
33.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
32.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
32.6
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
31.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
31.0
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
30.9
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
30.4
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
30.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
29.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
29.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
29.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
29.2
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
29.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
28.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
28.8
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
28.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
28.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
28.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
27.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
27.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
27.2
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
26.9
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
26.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
26.6
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
26.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
26.5
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
26.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
26.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
25.9
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
25.9
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
25.7
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
25.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
25.4
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
25.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
25.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
25.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
24.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
24.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
24.5
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
24.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
24.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
24.2
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
23.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
23.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
22.9
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
22.8
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
22.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
22.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
22.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
21.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
21.5
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
21.5
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
21.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
21.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
20.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
20.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
20.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
20.4
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
20.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
20.1
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
19.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
19.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
19.6
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
19.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
19.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
19.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
19.0
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
18.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
18.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
18.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
18.8
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
18.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
18.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
18.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
18.5
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
18.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
18.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
18.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
18.0
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
18.0
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
17.7
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
17.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
16.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
16.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
16.3
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
16.2
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
16.1
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
16.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
15.7
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
15.3
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
14.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
14.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
13.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
13.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
12.7
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
12.7
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
12.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
12.7
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
12.6
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
12.1
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
11.7
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
11.7
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
11.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
11.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
10.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
10.2
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
10.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
10.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
10.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
9.8
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
9.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
9.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
9.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
9.3
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
9.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
8.4
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
8.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
7.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
7.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
6.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
6.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
6.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
6.4
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
6.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
6.2
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
6.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
5.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
5.7
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
5.6
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
5.4
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
5.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
4.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
4.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
4.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
4.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
4.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
3.9
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
3.9
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
3.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
3.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
3.4
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
2.9
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
2.6
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
2.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
2.1
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
2.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
1.4
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HIPPOCAMPUS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.