HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:6.9 nTPM
HPA Brain:14.0 nTPM
GTEx:6.9 nTPM
FANTOM5:27.1 Scaled Tags Per Million
Pig:9.2 nTPM
Mouse:21.4 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039965
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 14.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.4
1855 Male, age 76, left hemisphere 13.9
1911 Female, age 85, right hemisphere 13.6
2148 Female, age 91, left hemisphere 13.0
1898 Male, age 80, left hemisphere 12.7
2621 Female, age 67, right hemisphere 11.3
2529 Female, age 94, left hemisphere 10.2
Dentate gyrus
nTPM: 13.8
1927 Female, age 91, both hemispheres 15.4
2010 Male, age 76, both hemispheres 14.8
2530 Female, age 94, left hemisphere 13.5
2531 Female, age 67, both hemispheres 13.4
2528 Male, age 74, both hemispheres 12.8
2246 Female, age 85, both hemispheres 12.6
Entorhinal gyrus
nTPM: 11.8
2764 Male, age 80, right hemisphere 12.9
1787 Male, age 76, left hemisphere 12.2
1938 Female, age 85, left hemisphere 12.1
2686 Male, age 75, right hemisphere 11.9
2613 Female, age 94, left hemisphere 11.3
2117 Female, age 91, right hemisphere 10.5
Hippocampus, CA1
nTPM: 14.0
2045 Male, age 76, both hemispheres 15.9
2749 Male, age 80, left hemisphere 15.1
1873 Female, age 85, both hemispheres 13.9
2082 Female, age 91, right hemisphere 12.8
2527 Male, age 74, both hemispheres 12.1
Hippocampus, CA2
nTPM: 13.2
1963 Male, age 80, left hemisphere 15.8
1892 Male, age 76, both hemispheres 13.6
2113 Female, age 91, right hemisphere 13.5
1940 Female, age 85, left hemisphere 13.4
2249 Male, age 74, both hemispheres 12.0
2437 Female, age 94, left hemisphere 10.7
Hippocampus, CA3
nTPM: 13.3
2137 Male, age 80, left hemisphere 16.0
2861 Female, age 67, both hemispheres 13.5
1867 Male, age 76, both hemispheres 13.2
1891 Female, age 85, both hemispheres 12.6
2436 Male, age 74, both hemispheres 12.4
2620 Female, age 94, left hemisphere 12.3
Parahippocampal cortex
nTPM: 12.6
2693 Female, age 94, both hemispheres 14.4
2532 Female, age 72, left hemisphere 13.5
1850 Male, age 80, both hemispheres 13.2
2250 Female, age 67, right hemisphere 12.9
1933 Female, age 85, both hemispheres 12.8
2245 Female, age 91, both hemispheres 12.5
1990 Female, age 91, right hemisphere 12.4
2692 Male, age 74, both hemispheres 12.3
2018 Male, age 76, both hemispheres 11.9
2622 Female, age 67, right hemisphere 10.2
Perirhinal gyrus
nTPM: 12.4
1841 Female, age 85, right hemisphere 13.8
2848 Male, age 76, right hemisphere 13.4
1847 Female, age 91, left hemisphere 11.8
1794 Male, age 80, right hemisphere 11.7
2521 Female, age 94, right hemisphere 11.3
Subiculum
nTPM: 11.5
2729 Female, age 91, right hemisphere 13.0
2042 Male, age 76, both hemispheres 12.6
1901 Male, age 80, both hemispheres 12.2
1977 Female, age 85, both hemispheres 11.6
2619 Male, age 74, both hemispheres 11.0
2438 Female, age 94, left hemisphere 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.9
Samples: 197

Max nTPM: 13.6
Min nTPM: 3.7
Std nTPM: 1.5
Median nTPM: 6.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 13.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 11.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 10.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 10.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 10.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 10.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 10.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 9.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 9.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 9.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 27.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.1
FF:10169-103B7 60 years, female 38.4
FF:10153-102I9 76 years, female 15.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.2
Pig sample Sample description nTPM
Subiculum
nTPM: 9.2
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 9.9
Sample C Male 8.9
Sample D Male 9.2
Dorsal hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.0
Sample A Female 8.7
Sample B Female 8.8
Sample C Male 8.0
Sample D Male 9.7
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.3
Sample A Female 7.6
Sample B Female 9.6
Sample C Male 7.9
Sample D Male 7.3
Ventral hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.5
Sample A Female 8.5
Sample B Female 8.7
Sample C Male 7.5
Sample D Male 7.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 21.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 20.5
Min nTPM: 18.3
Sample A Male 19.9
Sample B Male 20.1
Sample C Female 20.5
Sample D Female 18.3
Hippocampal formation
nTPM: 21.4
Samples: 4

Max nTPM: 25.9
Min nTPM: 18.8
Sample A Male 25.9
Sample B Male 20.4
Sample C Female 20.3
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69202621 Antisense, RP_050324_04_A07, Mouse strain C57BL/6J (56 days, male) 3.9

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