Expression of MMP13 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

MMP13 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1.58

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

96.6

Number of samples

492

Samples

Sample	Description	TPM
TCGA-CQ-6221-01A	79 years, male, white, stage:'--, alive, 1000 days	5299.1
TCGA-CN-6020-01A	58 years, male, black or african american, stage:Stage III, dead, 205 days	1637.0
TCGA-CV-7413-01A	74 years, female, white, stage:Stage II, dead, 294 days	1283.0
TCGA-CN-6016-01A	64 years, male, white, stage:Stage IVA, alive, 1443 days	1076.6
TCGA-CV-7238-01A	69 years, female, white, stage:Stage II, alive, 2727 days	1060.2
TCGA-QK-A64Z-01A	79 years, female, white, stage:Stage IVA, dead, 641 days	1040.4
TCGA-CQ-A4CG-01A	78 years, female, white, stage:Stage III, dead, 430 days	944.6
TCGA-CV-5976-01A	50 years, male, white, stage:Stage IVA, alive, 1478 days	912.4
TCGA-HD-7831-01A	74 years, male, white, stage:Stage IVA, alive, 667 days	887.8
TCGA-CV-A464-01A	48 years, male, white, stage:Stage III, alive, 1722 days	878.2
TCGA-CV-6950-01A	64 years, male, white, stage:Stage IVA, dead, 459 days	853.5
TCGA-BA-6873-01A	28 years, male, white, stage:Stage IVA, alive, 122 days	780.1
TCGA-CR-6474-01A	51 years, male, white, stage:Stage IVA, dead, 564 days	718.1
TCGA-CV-7104-01A	61 years, female, white, stage:Stage IVA, dead, 393 days	698.8
TCGA-CV-7415-01A	60 years, male, white, stage:Stage IVA, dead, 695 days	647.0
TCGA-CV-A45R-01A	46 years, male, white, stage:Stage III, alive, 5480 days	608.6
TCGA-DQ-5630-01A	73 years, male, white, stage:'--, alive, 1030 days	606.2
TCGA-F7-A61W-01A	51 years, male, asian, stage:Stage IVA, alive, 14 days	597.6
TCGA-BA-6870-01A	60 years, female, black or african american, stage:'--, dead, 451 days	539.0
TCGA-CN-4723-01A	67 years, male, white, stage:Stage IVA, alive, 1699 days	530.4
TCGA-UF-A718-01A	62 years, male, white, stage:Stage IVA, alive, 1971 days	525.3
TCGA-HD-8635-01A	61 years, female, white, stage:Stage III, alive, 695 days	512.6
TCGA-CR-7401-01A	64 years, male, white, stage:Stage I, alive, 1077 days	489.1
TCGA-QK-A8ZB-01A	68 years, male, black or african american, stage:Stage IVA, alive, 542 days	473.0
TCGA-CV-6954-01A	59 years, male, black or african american, stage:Stage IVA, dead, 2002 days	457.3
TCGA-WA-A7GZ-01A	58 years, male, white, stage:'--, dead, 625 days	436.2
TCGA-CN-5373-01A	55 years, female, white, stage:Stage I, alive, 1584 days	436.0
TCGA-CV-7235-01A	67 years, male, white, stage:Stage II, alive, 2347 days	432.0
TCGA-CV-7236-01A	77 years, female, white, stage:Stage IVA, dead, 144 days	425.0
TCGA-CV-A6JD-01A	82 years, female, white, stage:'--, dead, 182 days	424.7
TCGA-CR-7393-01A	26 years, male, white, stage:Stage III, alive, 993 days	418.4
TCGA-CQ-6218-01A	52 years, female, white, stage:Stage IVA, alive, 1253 days	408.4
TCGA-CR-7386-01A	69 years, male, white, stage:Stage IVA, alive, 1430 days	389.4
TCGA-H7-A6C4-01A	35 years, female, white, stage:Stage IVA, dead, 414 days	385.1
TCGA-CV-6934-01A	66 years, female, white, stage:Stage IVA, dead, 65 days	376.8
TCGA-CQ-A4C6-01A	63 years, male, asian, stage:Stage II, alive, 1353 days	375.7
TCGA-QK-AA3K-01A	60 years, male, black or african american, stage:Stage IVA, alive, 253 days	358.8
TCGA-UF-A7JJ-01A	68 years, male, stage:Stage IVA, alive, 549 days	353.4
TCGA-CV-5441-01A	58 years, male, white, stage:Stage IVA, alive, 2886 days	350.8
TCGA-CN-5355-01A	64 years, male, black or african american, stage:Stage IVA, alive, 1278 days	348.2
TCGA-CV-A6JT-01A	65 years, male, white, stage:Stage II, alive, 852 days	318.7
TCGA-CN-5361-01A	80 years, male, white, stage:Stage IVA, dead, 2120 days	314.2
TCGA-P3-A5Q6-01A	49 years, male, white, stage:Stage IVA, dead, 480 days	309.0
TCGA-4P-AA8J-01A	66 years, male, black or african american, stage:Stage IVA, alive, 102 days	308.8
TCGA-BA-7269-01A	61 years, male, white, stage:Stage III, alive, 1273 days	308.5
TCGA-CV-A6K2-01A	79 years, male, white, stage:Stage IVA, dead, 317 days	307.9
TCGA-CV-5444-01A	64 years, male, black or african american, stage:Stage IVA, alive, 2437 days	305.7
TCGA-CR-7376-01A	83 years, male, white, stage:Stage III, alive, 972 days	299.7
TCGA-CQ-6219-01A	50 years, female, white, stage:Stage IVA, dead, 479 days	295.3
TCGA-P3-A5QA-01A	41 years, male, stage:Stage I, alive, 2182 days	280.7
TCGA-CV-6943-01A	74 years, male, white, stage:Stage III, dead, 602 days	259.3
TCGA-HD-7753-01A	62 years, male, black or african american, stage:Stage I, alive, 866 days	251.3
TCGA-CN-6996-01A	58 years, female, white, stage:Stage IVA, dead, 530 days	245.8
TCGA-CV-6952-01A	65 years, female, white, stage:Stage IVA, dead, 185 days	240.5
TCGA-T3-A92M-01A	52 years, male, black or african american, stage:Stage IVA, alive, 417 days	240.4
TCGA-WA-A7H4-01A	69 years, male, white, stage:Stage II, alive, 443 days	224.8
TCGA-CV-7421-01A	76 years, male, white, stage:Stage IVA, dead, 2 days	215.3
TCGA-CN-5366-01A	51 years, male, white, stage:Stage IVA, dead, 360 days	206.3
TCGA-BA-A6DG-01A	49 years, male, white, stage:'--, dead, 69 days	206.1
TCGA-CR-7392-01A	67 years, female, white, stage:Stage IVA, alive, 1425 days	200.2
TCGA-IQ-A61E-01A	55 years, female, white, stage:Stage III, alive, 1147 days	197.8
TCGA-IQ-A61O-01A	43 years, male, white, stage:Stage IVA, dead, 421 days	197.7
TCGA-BA-5152-01A	56 years, male, white, stage:Stage IVA, alive, 1288 days	193.4
TCGA-F7-A50J-01A	67 years, female, white, stage:Stage III, alive, 947 days	187.7
TCGA-F7-8489-01A	48 years, male, white, stage:Stage II, alive, 658 days	185.4
TCGA-CV-A45T-01A	64 years, female, white, stage:'--, dead, 4856 days	184.8
TCGA-D6-8569-01A	52 years, male, white, stage:Stage II, alive, 770 days	178.5
TCGA-CV-7252-01A	62 years, female, black or african american, stage:Stage IVA, dead, 151 days	177.7
TCGA-DQ-5625-01A	52 years, female, white, stage:'--, dead, 1133 days	176.9
TCGA-CR-7367-01A	52 years, male, white, stage:Stage IVA, alive, 1440 days	162.7
TCGA-BA-6872-01A	47 years, male, white, stage:'--, dead, 384 days	161.6
TCGA-CV-7433-01A	49 years, male, white, stage:Stage IVA, dead, 601 days	160.8
TCGA-UF-A7JS-01A	59 years, male, white, stage:Stage IVA, dead, 680 days	159.0
TCGA-CN-4740-01A	79 years, female, white, stage:Stage IVA, dead, 839 days	157.3
TCGA-D6-A6EQ-01A	57 years, male, white, stage:Stage IVA, alive, 368 days	154.4
TCGA-CV-7438-01A	87 years, female, white, stage:Stage I, dead, 194 days	151.8
TCGA-CQ-A4C7-01A	88 years, male, white, stage:Stage III, dead, 353 days	149.9
TCGA-CV-7099-01A	85 years, female, white, stage:Stage II, dead, 243 days	149.0
TCGA-CV-6960-01A	49 years, male, black or african american, stage:Stage III, dead, 862 days	148.0
TCGA-CQ-5325-01A	65 years, male, white, stage:Stage I, dead, 654 days	140.3
TCGA-CQ-6224-01A	52 years, male, white, stage:Stage IVA, alive, 1721 days	140.0
TCGA-CN-6017-01A	55 years, male, white, stage:Stage IVA, dead, 853 days	133.2
TCGA-BB-A5HU-01A	47 years, male, white, stage:Stage IVA, alive, 782 days	131.7
TCGA-CQ-5330-01A	69 years, female, white, stage:Stage IVA, alive, 1897 days	131.3
TCGA-CV-5978-01A	53 years, female, black or african american, stage:Stage IVB, dead, 215 days	125.1
TCGA-P3-A6T8-01A	54 years, male, white, stage:Stage IVA, alive, 400 days	124.9
TCGA-F7-8298-01A	58 years, male, white, stage:Stage I, alive, 995 days	121.0
TCGA-BA-4075-01A	49 years, male, black or african american, stage:Stage III, dead, 283 days	118.5
TCGA-CR-6488-01A	68 years, female, white, stage:Stage II, alive, 379 days	117.1
TCGA-DQ-5624-01A	43 years, female, white, stage:'--, alive, 1778 days	116.0
TCGA-UF-A7JT-01A	72 years, female, white, stage:Stage IVA, dead, 993 days	113.6
TCGA-BB-8596-01A	69 years, female, white, stage:Stage IVA, alive, 2161 days	113.2
TCGA-BA-5557-01A	41 years, female, stage:Stage III, alive, 623 days	110.5
TCGA-UF-A7JK-01A	59 years, male, stage:Stage IVA, dead, 424 days	110.3
TCGA-CN-6994-01A	67 years, male, white, stage:Stage IVA, alive, 1183 days	108.0
TCGA-CR-7379-01A	78 years, female, white, stage:Stage IVA, alive, 1036 days	104.3
TCGA-CR-7364-01A	66 years, male, white, stage:Stage III, alive, 1435 days	104.1
TCGA-CN-4737-01A	19 years, male, white, stage:Stage IVA, alive, 625 days	103.1
TCGA-D6-8568-01A	62 years, male, white, stage:Stage II, alive, 759 days	102.3
TCGA-CR-7377-01A	58 years, male, white, stage:Stage IVA, dead, 279 days	100.8
TCGA-IQ-7632-01A	68 years, female, white, stage:Stage IVA, alive, 441 days	96.9
TCGA-CN-4728-01A	56 years, male, white, stage:Stage IVA, alive, 1724 days	96.9
TCGA-CV-7411-01A	64 years, female, white, stage:Stage IVA, dead, 2717 days	94.1
TCGA-UF-A7JD-01A	71 years, male, stage:Stage IVA, dead, 739 days	88.5
TCGA-CN-4736-01A	70 years, female, white, stage:'--, dead, 395 days	88.1
TCGA-IQ-A6SH-01A	55 years, male, black or african american, stage:Stage III, alive, 471 days	86.7
TCGA-D6-A4Z9-01A	59 years, male, white, stage:Stage IVA, alive, 539 days	83.9
TCGA-CN-4733-01A	61 years, male, white, stage:Stage III, alive, 1586 days	83.1
TCGA-CN-5365-01A	38 years, male, white, stage:Stage IVB, dead, 351 days	82.6
TCGA-BA-A6DJ-01A	62 years, male, asian, stage:Stage IVA, dead, 407 days	78.5
TCGA-CV-A45Y-01A	61 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	78.4
TCGA-CV-6942-01A	73 years, female, white, stage:Stage II, alive, 4282 days	77.4
TCGA-CN-6989-01A	64 years, male, white, stage:Stage IVA, dead, 980 days	75.9
TCGA-QK-A652-01A	60 years, male, white, stage:Stage III, alive, 645 days	75.9
TCGA-KU-A66T-01A	53 years, female, white, stage:Stage IVA, alive, 552 days	75.7
TCGA-CN-4725-01A	60 years, male, white, stage:Stage II, alive, 1157 days	75.4
TCGA-CQ-5334-01A	87 years, male, white, stage:Stage IVA, dead, 129 days	74.8
TCGA-CV-A45U-01A	59 years, male, white, stage:Stage IVA, dead, 1079 days	74.7
TCGA-CV-7410-01A	61 years, male, white, stage:Stage III, dead, 6417 days	72.4
TCGA-BB-4224-01A	52 years, male, white, stage:Stage IVA, alive, 278 days	72.1
TCGA-CN-5370-01A	78 years, male, white, stage:Stage III, dead, 259 days	71.6
TCGA-CN-6018-01A	85 years, female, white, stage:Stage IVA, dead, 580 days	71.5
TCGA-CV-A6JE-01A	78 years, male, white, stage:'--, alive, 1075 days	70.1
TCGA-CV-7247-01A	55 years, male, white, stage:Stage III, dead, 577 days	67.3
TCGA-UF-A7JH-01A	59 years, male, black or african american, stage:Stage IVA, alive, 896 days	65.8
TCGA-CV-5434-01A	60 years, male, black or african american, stage:Stage IVA, dead, 3314 days	64.9
TCGA-CN-4742-01A	48 years, female, white, stage:Stage IVA, dead, 397 days	63.7
TCGA-CQ-7063-01A	59 years, female, white, stage:Stage I, alive, 2133 days	62.7
TCGA-CV-7177-01A	82 years, female, white, stage:Stage II, dead, 663 days	61.3
TCGA-D6-6517-01A	59 years, male, white, stage:Stage III, alive, 292 days	60.6
TCGA-CV-7416-01A	29 years, female, white, stage:Stage IVA, dead, 763 days	59.6
TCGA-CQ-7065-01A	40 years, male, asian, stage:Stage II, alive, 1628 days	59.5
TCGA-CQ-6229-01A	61 years, male, white, stage:Stage II, alive, 1179 days	59.4
TCGA-CN-5364-01A	55 years, male, white, stage:Stage IVA, dead, 493 days	58.9
TCGA-RS-A6TO-01A	82 years, female, white, stage:Stage IVA, dead, 387 days	57.8
TCGA-D6-6824-01A	61 years, male, white, stage:Stage IVA, alive, 77 days	56.8
TCGA-CV-7435-01A	57 years, female, white, stage:Stage IVA, dead, 4680 days	56.7
TCGA-CV-7095-01A	87 years, female, stage:Stage II, dead, 572 days	56.0
TCGA-CV-7424-01A	67 years, male, asian, stage:Stage IVA, dead, 453 days	55.7
TCGA-CN-6019-01A	61 years, male, white, stage:Stage IVA, alive, 1038 days	54.7
TCGA-CR-7382-01A	49 years, male, white, stage:Stage IVA, alive, 796 days	52.5
TCGA-HD-7754-01A	69 years, male, white, stage:Stage IVA, alive, 783 days	51.2
TCGA-UF-A7JC-01A	42 years, male, white, stage:Stage IVA, dead, 546 days	51.1
TCGA-CN-5359-01A	59 years, male, white, stage:Stage IVA, dead, 377 days	48.5
TCGA-CR-7380-01A	58 years, male, white, stage:Stage IVB, dead, 606 days	46.9
TCGA-CN-4726-01A	68 years, male, white, stage:Stage IVA, dead, 142 days	45.0
TCGA-IQ-A61J-01A	54 years, male, white, stage:Stage IVA, alive, 1021 days	44.9
TCGA-CR-7369-01A	59 years, male, white, stage:Stage IVA, dead, 1090 days	44.6
TCGA-UF-A7JA-01A	66 years, female, white, stage:Stage IVA, alive, 2265 days	44.2
TCGA-CV-7429-01A	55 years, male, white, stage:Stage IVA, dead, 107 days	43.8
TCGA-CR-7383-01A	79 years, female, white, stage:Stage I, dead, 521 days	42.4
TCGA-CQ-7069-01A	77 years, female, white, stage:Stage II, alive, 1274 days	42.2
TCGA-CV-7414-01A	78 years, male, white, stage:Stage IVA, dead, 14 days	41.6
TCGA-QK-A6IH-01A	65 years, female, white, stage:Stage IVB, alive, 653 days	41.5
TCGA-CN-A49A-01A	60 years, male, white, stage:Stage IVB, dead, 526 days	39.3
TCGA-MT-A67D-01A	55 years, male, white, stage:Stage II, alive, 56 days	38.9
TCGA-RS-A6TP-01A	58 years, male, white, stage:Stage II, alive, 516 days	38.4
TCGA-BA-A6DE-01A	70 years, female, white, stage:Stage II, alive, 440 days	38.3
TCGA-D6-A6EP-01A	62 years, male, white, stage:Stage III, alive, 424 days	37.8
TCGA-CN-4729-01A	73 years, male, white, stage:Stage III, alive, 392 days	37.7
TCGA-CR-7397-01A	44 years, male, white, stage:Stage IVA, alive, 754 days	37.5
TCGA-CQ-7068-01A	80 years, female, white, stage:Stage II, alive, 1309 days	37.1
TCGA-CR-7389-01A	55 years, male, black or african american, stage:'--, alive, 392 days	36.5
TCGA-CR-5247-01A	48 years, male, black or african american, stage:'--, alive, 358 days	35.6
TCGA-CR-6484-01A	67 years, female, asian, stage:Stage IVA, alive, 354 days	35.1
TCGA-BB-4217-01A	68 years, male, black or african american, stage:Stage IVA, alive, 187 days	34.5
TCGA-UF-A7J9-01A	75 years, male, white, stage:Stage IVA, alive, 1358 days	34.2
TCGA-CV-A6JN-01A	53 years, male, white, stage:'--, alive, 906 days	34.1
TCGA-HD-A633-01A	74 years, male, white, stage:Stage IVA, alive, 421 days	33.6
TCGA-CX-7219-01A	47 years, male, black or african american, stage:Stage IVA, alive, 1045 days	32.9
TCGA-CQ-A4CD-01A	69 years, male, white, stage:Stage IVA, alive, 1022 days	32.2
TCGA-CN-6997-01A	66 years, male, white, stage:Stage IVA, dead, 988 days	31.6
TCGA-P3-A6T4-01A	54 years, male, white, stage:Stage IVA, dead, 62 days	30.8
TCGA-CQ-5329-01A	46 years, female, white, stage:Stage II, alive, 2143 days	30.8
TCGA-BA-4078-01A	83 years, male, white, stage:'--, dead, 276 days	30.7
TCGA-CV-7406-01A	49 years, male, white, stage:Stage II, dead, 1748 days	30.3
TCGA-D6-6515-01A	82 years, female, white, stage:Stage II, dead, 403 days	30.0
TCGA-CV-6933-01A	53 years, male, white, stage:Stage III, dead, 2741 days	28.6
TCGA-CV-6935-01A	67 years, male, white, stage:Stage IVA, dead, 295 days	28.4
TCGA-CQ-5326-01A	67 years, male, white, stage:Stage IVA, dead, 89 days	28.3
TCGA-CV-7254-01A	55 years, male, white, stage:Stage II, dead, 1459 days	27.7
TCGA-CV-7437-01A	77 years, male, stage:Stage II, dead, 506 days	27.7
TCGA-CV-A45V-01A	87 years, female, white, stage:Stage IVA, dead, 32 days	26.8
TCGA-P3-A6T3-01A	49 years, male, white, stage:Stage IVA, dead, 577 days	26.3
TCGA-BB-A5HY-01A	64 years, male, white, stage:Stage IVA, dead, 321 days	26.0
TCGA-BA-4076-01A	39 years, male, white, stage:'--, dead, 415 days	25.8
TCGA-F7-A50I-01A	72 years, male, white, stage:Stage IVA, alive, 92 days	25.6
TCGA-D6-6823-01A	50 years, male, white, stage:Stage II, alive, 701 days	24.7
TCGA-CV-5979-01A	26 years, male, white, stage:Stage IVA, alive, 1315 days	24.6
TCGA-CV-7091-01A	54 years, male, white, stage:Stage I, alive, 3381 days	24.5
TCGA-CQ-7072-01A	51 years, male, white, stage:Stage II, alive, 2359 days	24.5
TCGA-D6-A4ZB-01A	61 years, male, white, stage:Stage III, alive, 376 days	24.3
TCGA-CV-7434-01A	64 years, male, white, stage:Stage IVA, dead, 218 days	24.1
TCGA-CV-6938-01A	87 years, male, white, stage:Stage II, dead, 144 days	24.0
TCGA-BA-4074-01A	69 years, male, white, stage:Stage IVA, dead, 462 days	23.7
TCGA-T2-A6WZ-01A	53 years, male, white, stage:'--, dead, 484 days	23.6
TCGA-CN-6022-01A	49 years, male, white, stage:Stage IVA, dead, 281 days	23.0
TCGA-D6-6825-01A	73 years, male, white, stage:Stage I, alive, 491 days	22.8
TCGA-CQ-A4CB-01A	59 years, male, stage:Stage III, alive, 893 days	22.7
TCGA-CN-A498-01A	61 years, female, white, stage:Stage III, dead, 773 days	22.4
TCGA-CR-7398-01A	53 years, female, white, stage:Stage II, alive, 156 days	22.4
TCGA-CV-A460-01A	72 years, male, white, stage:'--, dead, 1838 days	22.1
TCGA-CR-6492-01A	78 years, male, white, stage:Stage III, alive, 479 days	21.2
TCGA-QK-A6IG-01A	69 years, male, white, stage:Stage III, dead, 222 days	20.9
TCGA-CV-A45X-01A	47 years, male, white, stage:Stage IVA, dead, 198 days	20.7
TCGA-CR-7365-01A	60 years, male, white, stage:Stage IVA, alive, 1191 days	20.5
TCGA-D6-6826-01A	64 years, female, white, stage:Stage IVA, dead, 348 days	20.3
TCGA-CV-7090-01A	39 years, male, white, stage:Stage II, alive, 5252 days	20.2
TCGA-BA-A6DD-01A	44 years, male, black or african american, stage:Stage IVA, dead, 173 days	19.7
TCGA-CV-5970-01A	59 years, male, white, stage:Stage IVA, dead, 406 days	19.7
TCGA-CR-7395-01A	80 years, female, white, stage:Stage II, alive, 930 days	19.1
TCGA-F7-A620-01A	47 years, male, white, stage:Stage III, alive, 543 days	19.1
TCGA-CR-7373-01A	66 years, male, white, stage:Stage IVA, alive, 889 days	17.9
TCGA-CN-4731-01A	63 years, female, white, stage:Stage IVA, dead, 998 days	17.8
TCGA-BB-A5HZ-01A	65 years, male, white, stage:Stage IVA, alive, 827 days	17.6
TCGA-CV-7245-01A	62 years, male, white, stage:Stage IVA, alive, 797 days	17.5
TCGA-CR-6477-01A	56 years, female, white, stage:'--, alive, 514 days	17.3
TCGA-CN-A641-01A	47 years, male, white, stage:Stage IVA, alive, 367 days	17.0
TCGA-CR-7391-01A	36 years, female, white, stage:Stage I, alive, 913 days	16.9
TCGA-CQ-6227-01A	77 years, male, white, stage:Stage IVA, dead, 129 days	16.6
TCGA-CV-5436-01A	65 years, male, stage:Stage IVA, dead, 584 days	16.3
TCGA-CV-7568-01A	48 years, female, white, stage:Stage IVA, dead, 927 days	16.0
TCGA-UF-A7JO-01A	79 years, female, white, stage:Stage IVA, dead, 631 days	16.0
TCGA-CV-6003-01A	50 years, female, white, stage:Stage III, alive, 1665 days	16.0
TCGA-CN-6024-01A	66 years, male, white, stage:Stage IVA, dead, 337 days	15.9
TCGA-CQ-5332-01A	87 years, male, white, stage:Stage III, dead, 317 days	15.2
TCGA-CN-A63V-01A	59 years, male, white, stage:Stage IVA, alive, 679 days	15.1
TCGA-CR-7372-01A	45 years, male, white, stage:Stage I, alive, 759 days	14.9
TCGA-CV-6941-01A	51 years, male, white, stage:Stage III, dead, 342 days	14.9
TCGA-IQ-A61H-01A	76 years, male, white, stage:Stage II, alive, 1138 days	14.3
TCGA-CV-7263-01A	64 years, male, black or african american, stage:Stage II, dead, 560 days	14.3
TCGA-CV-7423-01A	65 years, male, white, stage:Stage II, dead, 3059 days	14.2
TCGA-CN-5358-01A	60 years, male, white, stage:Stage II, dead, 261 days	14.0
TCGA-CX-7085-01A	77 years, female, white, stage:Stage I, alive, 321 days	13.8
TCGA-D6-A74Q-01A	67 years, male, white, stage:Stage IVA, alive, 710 days	13.7
TCGA-CV-6959-01A	48 years, male, white, stage:Stage III, dead, 256 days	13.3
TCGA-CV-6951-01A	57 years, male, white, stage:Stage IVA, dead, 915 days	13.1
TCGA-CN-6011-01A	57 years, male, white, stage:Stage IVA, alive, 933 days	13.1
TCGA-CV-A465-01A	24 years, male, white, stage:Stage III, dead, 215 days	13.0
TCGA-DQ-7588-01A	66 years, male, white, stage:'--, dead, 427 days	12.9
TCGA-UF-A71B-01A	50 years, male, white, stage:Stage IVA, alive, 1506 days	12.9
TCGA-BA-5556-01A	58 years, female, white, stage:Stage II, alive, 725 days	12.7
TCGA-CV-7432-01A	79 years, male, white, stage:Stage II, dead, 2570 days	12.4
TCGA-BB-A6UO-01A	61 years, female, white, stage:Stage IVA, dead, 268 days	12.4
TCGA-P3-A6T5-01A	79 years, female, white, stage:Stage IVA, dead, 882 days	12.4
TCGA-CQ-6228-01A	71 years, female, white, stage:Stage IVA, dead, 456 days	12.4
TCGA-CN-4738-01A	53 years, male, white, stage:Stage IVA, dead, 436 days	12.3
TCGA-CV-7102-01A	76 years, female, white, stage:Stage IVA, dead, 56 days	12.2
TCGA-CN-5367-01A	60 years, female, white, stage:Stage IVA, dead, 352 days	12.1
TCGA-CQ-7071-01A	76 years, female, white, stage:Stage III, alive, 1311 days	12.1
TCGA-BA-A6DB-01A	24 years, female, white, stage:Stage I, alive, 216 days	11.8
TCGA-CR-7394-01A	70 years, male, white, stage:Stage IVA, alive, 1346 days	11.8
TCGA-CR-6482-01A	62 years, male, black or african american, stage:'--, alive, 345 days	11.6
TCGA-CR-6493-01A	69 years, male, black or african american, stage:Stage IVA, dead, 282 days	11.1
TCGA-CN-A49C-01A	67 years, male, white, stage:'--, alive, 645 days	10.9
TCGA-CR-5249-01A	35 years, female, white, stage:Stage II, alive, 1152 days	10.8
TCGA-IQ-7630-01A	49 years, male, white, stage:Stage II, alive, 485 days	10.6
TCGA-CR-6478-01A	66 years, female, white, stage:'--, dead, 183 days	10.3
TCGA-P3-A6T7-01A	55 years, male, white, stage:Stage IVA, dead, 487 days	10.0
TCGA-CR-6491-01A	60 years, male, black or african american, stage:Stage IVA, alive, 693 days	10.0
TCGA-CR-7368-01A	54 years, male, white, stage:Stage IVA, alive, 1245 days	9.8
TCGA-CR-7390-01A	67 years, male, white, stage:Stage IVA, alive, 1508 days	9.7
TCGA-CV-6945-01A	41 years, male, white, stage:Stage IVA, dead, 366 days	9.6
TCGA-CN-4735-01A	52 years, male, white, stage:Stage IVA, alive, 1737 days	9.6
TCGA-CQ-5324-01A	59 years, male, white, stage:Stage III, alive, 1593 days	9.3
TCGA-CV-7446-01A	66 years, male, white, stage:Stage IVA, dead, 1093 days	9.2
TCGA-CR-7388-01A	70 years, female, white, stage:'--, dead, 823 days	9.0
TCGA-CV-7100-01A	66 years, male, white, stage:Stage III, dead, 274 days	8.9
TCGA-CV-6441-01A	60 years, male, white, stage:Stage III, dead, 292 days	8.9
TCGA-CV-7097-01A	53 years, male, white, stage:Stage II, dead, 385 days	8.7
TCGA-F7-A622-01A	75 years, male, white, stage:Stage III, dead, 359 days	8.7
TCGA-DQ-5629-01A	64 years, male, white, stage:'--, dead, 941 days	8.7
TCGA-BA-A4II-01A	46 years, male, white, stage:Stage II, alive, 918 days	8.5
TCGA-CV-6937-01A	71 years, male, white, stage:Stage II, dead, 624 days	8.5
TCGA-CV-5977-01A	66 years, male, white, stage:Stage IVA, alive, 1840 days	8.2
TCGA-F7-A61S-01A	62 years, male, white, stage:Stage III, alive, 576 days	8.2
TCGA-T2-A6WX-01A	73 years, female, white, stage:'--, dead, 209 days	8.0
TCGA-BB-4227-01A	66 years, male, white, stage:Stage IVA, alive, 134 days	7.9
TCGA-CR-7404-01A	53 years, male, white, stage:'--, alive, 1472 days	7.9
TCGA-CN-A6V3-01A	61 years, male, white, stage:Stage IVA, alive, 742 days	7.8
TCGA-CQ-A4CI-01A	73 years, male, white, stage:Stage III, alive, 950 days	7.7
TCGA-QK-A6VC-01A	62 years, female, black or african american, stage:Stage IVA, alive, 600 days	7.7
TCGA-CV-5439-01A	62 years, male, white, stage:Stage IVA, dead, 546 days	7.6
TCGA-CN-5363-01A	48 years, male, black or african american, stage:Stage IVB, dead, 253 days	7.5
TCGA-BA-A6D8-01A	59 years, male, black or african american, stage:Stage IVA, alive, 850 days	7.3
TCGA-CV-6940-01A	80 years, female, white, stage:Stage III, dead, 804 days	7.1
TCGA-CV-6939-01A	60 years, male, white, stage:Stage IVA, dead, 666 days	7.0
TCGA-CV-5435-01A	57 years, male, white, stage:Stage IVA, dead, 2319 days	6.9
TCGA-QK-A6VB-01A	66 years, male, white, stage:Stage IVA, alive, 641 days	6.9
TCGA-T3-A92N-01A	79 years, male, black or african american, stage:Stage IVA, dead, 95 days	6.8
TCGA-CV-7418-01A	62 years, male, black or african american, stage:Stage IVA, dead, 789 days	6.7
TCGA-UF-A7JF-01A	80 years, male, white, stage:Stage IVA, alive, 1686 days	6.7
TCGA-CV-6961-01A	61 years, male, white, stage:Stage II, dead, 76 days	6.7
TCGA-CV-5966-01A	63 years, female, white, stage:Stage IVA, dead, 545 days	6.4
TCGA-CQ-A4CE-01A	76 years, female, stage:Stage II, alive, 897 days	6.4
TCGA-CQ-5333-01A	74 years, male, white, stage:Stage II, dead, 341 days	6.4
TCGA-F7-A50G-01A	66 years, male, white, stage:Stage III, alive, 616 days	6.4
TCGA-CQ-6222-01A	63 years, male, white, stage:Stage IVA, alive, 2016 days	6.3
TCGA-CV-7427-01A	73 years, female, white, stage:Stage II, dead, 4760 days	6.3
TCGA-CV-7430-01A	56 years, male, white, stage:Stage IVA, dead, 495 days	6.1
TCGA-CN-6013-01A	56 years, male, white, stage:Stage IVA, dead, 727 days	6.0
TCGA-CN-4741-01A	75 years, male, white, stage:Stage IVA, alive, 2239 days	6.0
TCGA-C9-A47Z-01A	72 years, female, asian, stage:Stage III, dead, 191 days	5.8
TCGA-HD-7229-01A	60 years, male, white, stage:Stage IVA, alive, 1027 days	5.7
TCGA-HD-A6HZ-01A	79 years, female, white, stage:Stage III, alive, 111 days	5.7
TCGA-F7-7848-01A	47 years, male, white, stage:Stage IVA, alive, 1131 days	5.6
TCGA-CV-A45O-01A	57 years, male, white, stage:'--, alive, 851 days	5.6
TCGA-BA-A8YP-01A	50 years, male, black or african american, stage:Stage IVB, alive, 499 days	5.4
TCGA-CN-A49B-01A	71 years, male, white, stage:Stage III, alive, 904 days	5.4
TCGA-CQ-5327-01A	61 years, female, asian, stage:Stage IVA, alive, 1660 days	5.4
TCGA-CR-7374-01A	67 years, female, white, stage:'--, alive, 30 days	5.4
TCGA-BA-5151-01A	72 years, male, white, stage:Stage IVA, alive, 722 days	5.3
TCGA-H7-A76A-01A	57 years, male, white, stage:'--, alive, 637 days	5.3
TCGA-HD-7832-01A	52 years, male, white, stage:Stage IVA, alive, 836 days	5.2
TCGA-CV-7422-01A	60 years, female, white, stage:Stage IVA, dead, 1037 days	5.2
TCGA-DQ-7592-01A	57 years, male, american indian or alaska native, stage:'--, alive, 1143 days	5.1
TCGA-UF-A7JV-01A	62 years, female, white, stage:Stage IVA, dead, 90 days	5.1
TCGA-CV-5971-01A	60 years, male, white, stage:Stage IVA, alive, 701 days	5.0
TCGA-H7-8502-01A	50 years, male, white, stage:Stage IVA, alive, 458 days	5.0
TCGA-CR-5243-01A	51 years, male, white, stage:'--, alive, 2562 days	5.0
TCGA-CV-7425-01A	77 years, female, white, stage:Stage III, dead, 1718 days	5.0
TCGA-UF-A71A-01A	67 years, male, white, stage:Stage IVA, dead, 86 days	4.9
TCGA-HD-8634-01A	51 years, female, white, stage:Stage I, dead, 385 days	4.9
TCGA-CV-7261-01A	57 years, male, white, stage:Stage IVA, alive, 1512 days	4.8
TCGA-MT-A51X-01A	30 years, male, white, stage:Stage IVA, alive, 242 days	4.8
TCGA-P3-A6T0-01A	47 years, female, white, stage:Stage IVA, alive, 578 days	4.7
TCGA-CN-4734-01A	70 years, male, white, stage:Stage II, alive, 1690 days	4.6
TCGA-IQ-7631-01A	60 years, female, white, stage:Stage II, alive, 1172 days	4.5
TCGA-TN-A7HJ-01A	51 years, male, white, stage:Stage IVA, alive, 403 days	4.5
TCGA-CQ-6223-01A	69 years, male, white, stage:Stage II, alive, 1428 days	4.4
TCGA-CV-A468-01A	42 years, male, stage:Stage IVA, dead, 464 days	4.4
TCGA-T2-A6X2-01A	82 years, male, white, stage:Stage III, alive, 987 days	4.4
TCGA-CV-7101-01A	80 years, male, white, stage:Stage II, dead, 160 days	4.2
TCGA-MZ-A7D7-01A	51 years, male, white, stage:Stage IVA, alive, 547 days	4.2
TCGA-CV-A6JZ-01A	68 years, male, white, stage:Stage II, alive, 714 days	4.1
TCGA-BA-5558-01A	65 years, male, white, stage:'--, alive, 1995 days	4.0
TCGA-C9-A480-01A	45 years, female, asian, stage:Stage III, alive, 386 days	4.0
TCGA-CR-7371-01A	45 years, female, white, stage:Stage III, dead, 94 days	3.9
TCGA-HL-7533-01A	65 years, male, white, stage:'--, alive, 1057 days	3.9
TCGA-CN-4722-01A	61 years, female, white, stage:Stage II, alive, 1483 days	3.8
TCGA-CV-7248-01A	63 years, female, black or african american, stage:Stage IVA, dead, 521 days	3.8
TCGA-BA-5559-01A	71 years, male, white, stage:'--, dead, 2083 days	3.8
TCGA-CR-5250-01A	71 years, male, white, stage:'--, alive, 799 days	3.7
TCGA-CR-7370-01A	72 years, female, white, stage:'--, alive, 105 days	3.7
TCGA-CX-7082-01A	82 years, male, white, stage:Stage IVA, dead, 11 days	3.7
TCGA-CV-A45Z-01A	75 years, male, white, stage:'--, dead, 1466 days	3.7
TCGA-DQ-5631-01A	52 years, male, white, stage:'--, dead, 548 days	3.7
TCGA-CR-6470-01A	38 years, male, white, stage:Stage II, alive, 1521 days	3.7
TCGA-CV-7178-01A	64 years, female, white, stage:Stage IVA, dead, 2166 days	3.6
TCGA-CV-7255-01A	32 years, female, white, stage:Stage IVA, dead, 64 days	3.5
TCGA-CV-7183-01A	53 years, male, white, stage:Stage II, alive, 3981 days	3.5
TCGA-CV-A45W-01A	75 years, male, white, stage:Stage II, dead, 1398 days	3.4
TCGA-UF-A71E-01A	63 years, male, white, stage:Stage IVA, dead, 1504 days	3.4
TCGA-CV-7428-01A	47 years, male, white, stage:Stage IVA, dead, 1671 days	3.4
TCGA-CV-5431-01A	73 years, male, white, stage:Stage IVA, dead, 522 days	3.2
TCGA-HD-8224-01A	63 years, male, white, stage:Stage IVA, dead, 446 days	3.2
TCGA-CN-5369-01A	90 years, female, white, stage:Stage IVA, dead, 1 days	3.2
TCGA-IQ-A61I-01A	63 years, male, black or african american, stage:Stage IVA, dead, 2 days	3.2
TCGA-QK-A8Z7-01A	59 years, male, black or african american, stage:Stage IVA, alive, 392 days	3.2
TCGA-CV-5432-01A	68 years, male, white, stage:Stage III, alive, 3930 days	3.2
TCGA-CR-6472-01A	59 years, male, white, stage:'--, alive, 1050 days	3.1
TCGA-CQ-A4C9-01A	56 years, male, stage:Stage III, alive, 707 days	3.1
TCGA-CV-6436-01A	62 years, male, white, stage:Stage IVA, alive, 1899 days	2.9
TCGA-BA-A6DI-01A	62 years, male, black or african american, stage:'--, dead, 336 days	2.8
TCGA-P3-A6SX-01A	67 years, male, white, stage:Stage III, dead, 1430 days	2.7
TCGA-QK-A8ZA-01A	60 years, male, black or african american, stage:'--, dead, 371 days	2.7
TCGA-BA-A4IF-01A	59 years, male, white, stage:'--, alive, 895 days	2.7
TCGA-CN-6988-01A	47 years, male, white, stage:Stage IVA, alive, 318 days	2.6
TCGA-CV-7407-01A	67 years, female, white, stage:Stage II, dead, 1081 days	2.5
TCGA-CN-A497-01A	63 years, male, stage:Stage III, alive, 1065 days	2.5
TCGA-BA-6871-01A	75 years, male, white, stage:'--, dead, 108 days	2.5
TCGA-BA-A4IH-01A	57 years, male, white, stage:'--, alive, 622 days	2.2
TCGA-CV-A45P-01A	82 years, female, white, stage:Stage I, alive, 639 days	2.1
TCGA-CV-7103-01A	49 years, male, white, stage:Stage IVA, dead, 1591 days	2.1
TCGA-CQ-A4CH-01A	58 years, male, asian, stage:Stage II, dead, 379 days	2.1
TCGA-CX-A4AQ-01A	56 years, male, white, stage:Stage IVA, alive, 1555 days	2.1
TCGA-CN-6023-01A	73 years, male, white, stage:Stage IVA, alive, 1584 days	2.1
TCGA-CV-7242-01A	60 years, female, white, stage:Stage II, alive, 1095 days	2.0
TCGA-CV-5440-01A	52 years, male, white, stage:Stage IVA, alive, 3270 days	2.0
TCGA-H7-8501-01A	54 years, male, white, stage:Stage IVA, alive, 461 days	2.0
TCGA-MT-A67A-01A	85 years, female, white, stage:Stage I, alive, 914 days	1.9
TCGA-D6-6827-01A	55 years, female, white, stage:Stage I, alive, 568 days	1.9
TCGA-CN-A642-01A	57 years, male, white, stage:Stage IVB, dead, 82 days	1.8
TCGA-IQ-A6SG-01A	61 years, female, white, stage:Stage III, alive, 579 days	1.8
TCGA-CN-6998-01A	53 years, male, white, stage:Stage IVA, dead, 357 days	1.8
TCGA-CN-A499-01A	60 years, female, white, stage:Stage II, alive, 717 days	1.8
TCGA-CV-A6JM-01A	85 years, male, white, stage:'--, dead, 194 days	1.7
TCGA-CN-A63T-01A	60 years, male, white, stage:Stage IVA, alive, 225 days	1.7
TCGA-MT-A51W-01A	52 years, female, white, stage:Stage I, alive, 437 days	1.7
TCGA-CN-A63W-01A	48 years, female, white, stage:Stage IVA, dead, 377 days	1.7
TCGA-KU-A66S-01A	69 years, female, white, stage:Stage III, dead, 406 days	1.7
TCGA-CV-A463-01A	82 years, female, white, stage:Stage IVA, dead, 23 days	1.6
TCGA-CV-6955-01A	74 years, female, white, stage:Stage II, dead, 334 days	1.6
TCGA-MZ-A5BI-01A	53 years, male, white, stage:'--, dead, 217 days	1.6
TCGA-CR-7399-01A	60 years, female, white, stage:Stage IVA, alive, 181 days	1.5
TCGA-BA-A6DA-01A	41 years, female, white, stage:Stage IVA, alive, 351 days	1.5
TCGA-CR-6471-01A	58 years, male, white, stage:Stage IVA, dead, 1202 days	1.5
TCGA-IQ-A61G-01A	57 years, male, white, stage:Stage IVA, alive, 360 days	1.5
TCGA-CV-6936-01A	68 years, male, white, stage:Stage IVA, dead, 166 days	1.5
TCGA-MT-A67F-01A	60 years, female, white, stage:Stage IVA, alive, 384 days	1.5
TCGA-HD-A4C1-01A	41 years, female, black or african american, stage:Stage IVA, alive, 11 days	1.5
TCGA-CN-4739-01A	71 years, male, white, stage:Stage IVA, dead, 1394 days	1.4
TCGA-CN-4730-01A	62 years, male, white, stage:Stage IVA, alive, 817 days	1.4
TCGA-BA-5555-01A	54 years, male, black or african american, stage:Stage IVA, alive, 520 days	1.4
TCGA-CN-6010-01A	53 years, male, white, stage:Stage IVA, alive, 1523 days	1.4
TCGA-CQ-6225-01A	65 years, male, white, stage:Stage III, dead, 403 days	1.3
TCGA-CN-5360-01A	68 years, male, white, stage:Stage IVA, alive, 2169 days	1.3
TCGA-CN-6995-01A	78 years, male, white, stage:Stage IVA, dead, 112 days	1.3
TCGA-CV-7089-01A	74 years, male, white, stage:Stage IVA, dead, 1972 days	1.3
TCGA-CR-6480-01A	53 years, male, white, stage:'--, alive, 362 days	1.3
TCGA-CV-7250-01A	64 years, male, white, stage:Stage IVA, dead, 2900 days	1.3
TCGA-CQ-5331-01A	73 years, female, white, stage:'--, alive, 1399 days	1.2
TCGA-CN-4727-01A	56 years, male, white, stage:Stage IVA, alive, 1560 days	1.2
TCGA-CR-6473-01A	68 years, male, white, stage:'--, alive, 1125 days	1.1
TCGA-CV-A6JU-01A	61 years, female, white, stage:Stage IVB, alive, 110 days	1.1
TCGA-CV-5430-01A	61 years, male, white, stage:Stage IVA, alive, 4241 days	1.1
TCGA-D6-6516-01A	69 years, male, white, stage:Stage I, alive, 773 days	1.1
TCGA-CV-5443-01A	63 years, male, black or african american, stage:Stage III, alive, 2784 days	1.1
TCGA-CX-7086-01A	53 years, male, black or african american, stage:Stage III, alive, 573 days	1.0
TCGA-HD-8314-01A	58 years, male, white, stage:Stage III, alive, 670 days	1.0
TCGA-CQ-6220-01A	69 years, male, white, stage:Stage III, dead, 985 days	1.0
TCGA-P3-A5QF-01A	49 years, male, white, stage:Stage IVA, dead, 330 days	1.0
TCGA-CN-6992-01A	61 years, male, white, stage:Stage IVA, alive, 1066 days	1.0
TCGA-P3-A6SW-01A	50 years, male, white, stage:Stage IVB, alive, 1120 days	1.0
TCGA-UP-A6WW-01A	58 years, male, white, stage:'--, alive, 518 days	1.0
TCGA-P3-A6T2-01A	45 years, male, white, stage:Stage IVA, alive, 2298 days	1.0
TCGA-CV-6948-01A	79 years, female, white, stage:Stage IVB, dead, 1289 days	1.0
TCGA-CV-6433-01A	57 years, male, white, stage:Stage II, alive, 641 days	0.9
TCGA-HD-A6I0-01A	56 years, male, white, stage:Stage IVA, alive, 210 days	0.9
TCGA-P3-A6T6-01A	53 years, male, white, stage:Stage IVA, dead, 395 days	0.9
TCGA-QK-AA3J-01A	69 years, male, black or african american, stage:Stage I, alive, 466 days	0.8
TCGA-BB-4225-01A	73 years, male, white, stage:'--, alive, 146 days	0.8
TCGA-KU-A6H8-01A	41 years, male, white, stage:Stage IVA, dead, 327 days	0.8
TCGA-BB-4223-01A	48 years, male, white, stage:Stage IVA, alive, 3221 days	0.8
TCGA-CV-A45Q-01A	69 years, female, white, stage:'--, dead, 5152 days	0.8
TCGA-CR-7402-01A	68 years, male, white, stage:'--, alive, 911 days	0.7
TCGA-CN-6012-01A	66 years, male, white, stage:Stage IVA, alive, 1460 days	0.7
TCGA-CR-7385-01A	42 years, male, white, stage:'--, alive, 997 days	0.7
TCGA-CV-A6JY-01A	69 years, male, white, stage:Stage IVA, alive, 646 days	0.7
TCGA-UF-A71D-01A	54 years, female, white, stage:Stage IVA, alive, 1461 days	0.7
TCGA-CN-5356-01A	56 years, male, white, stage:Stage III, alive, 1409 days	0.7
TCGA-H7-7774-01A	75 years, female, white, stage:Stage IVA, alive, 407 days	0.7
TCGA-CQ-5323-01A	82 years, male, white, stage:Stage I, alive, 1466 days	0.7
TCGA-CN-A6V6-01A	59 years, male, white, stage:Stage IVA, alive, 635 days	0.7
TCGA-QK-A6IJ-01A	71 years, male, white, stage:Stage III, alive, 387 days	0.7
TCGA-F7-A623-01A	70 years, male, white, stage:Stage IVA, alive, 616 days	0.6
TCGA-BA-5153-01A	51 years, male, white, stage:'--, dead, 1762 days	0.6
TCGA-CV-A6K1-01A	65 years, male, white, stage:Stage IVA, alive, 685 days	0.5
TCGA-CN-A63U-01A	50 years, male, white, stage:Stage IVA, alive, 964 days	0.5
TCGA-CN-5374-01A	56 years, female, white, stage:Stage IVA, dead, 1732 days	0.5
TCGA-T2-A6X0-01A	49 years, male, white, stage:'--, alive, 216 days	0.5
TCGA-F7-A61V-01A	54 years, male, white, stage:Stage II, alive, 759 days	0.5
TCGA-BB-4228-01A	50 years, male, white, stage:Stage III, alive, 559 days	0.5
TCGA-DQ-7591-01A	62 years, male, white, stage:'--, alive, 622 days	0.5
TCGA-CV-7440-01A	38 years, male, white, stage:Stage II, dead, 675 days	0.5
TCGA-CN-A6UY-01A	57 years, male, white, stage:Stage IVA, alive, 713 days	0.5
TCGA-BA-A6DL-01A	59 years, male, white, stage:'--, alive, 623 days	0.5
TCGA-D6-A6ES-01A	50 years, male, white, stage:Stage IVA, alive, 389 days	0.5
TCGA-D6-A6EN-01A	71 years, male, white, stage:Stage III, alive, 687 days	0.5
TCGA-CV-A461-01A	65 years, male, white, stage:'--, dead, 2064 days	0.4
TCGA-BA-6869-01A	62 years, male, white, stage:Stage III, alive, 644 days	0.4
TCGA-CV-6962-01A	65 years, male, white, stage:Stage IVA, dead, 126 days	0.4
TCGA-QK-A8Z8-01A	60 years, female, black or african american, stage:Stage IVC, dead, 171 days	0.4
TCGA-BA-A4IG-01A	77 years, male, white, stage:'--, alive, 855 days	0.4
TCGA-KU-A6H7-01A	55 years, female, white, stage:Stage IVA, alive, 586 days	0.4
TCGA-CR-6481-01A	47 years, male, white, stage:'--, alive, 311 days	0.4
TCGA-QK-A6V9-01A	56 years, male, white, stage:Stage II, alive, 833 days	0.3
TCGA-D6-A6EO-01A	44 years, male, white, stage:Stage IVA, alive, 759 days	0.3
TCGA-UF-A719-01A	54 years, male, stage:Stage II, alive, 1663 days	0.3
TCGA-TN-A7HL-01A	59 years, male, white, stage:Stage IVA, alive, 619 days	0.3
TCGA-D6-A6EK-01A	67 years, male, white, stage:Stage III, alive, 875 days	0.2
TCGA-MT-A7BN-01A	74 years, male, white, stage:Stage IVA, alive, 469 days	0.2
TCGA-CV-6953-01A	80 years, female, white, stage:Stage III, dead, 1641 days	0.2
TCGA-BB-A6UM-01A	52 years, male, white, stage:Stage III, alive, 393 days	0.2
TCGA-TN-A7HI-01A	56 years, male, white, stage:Stage IVA, alive, 412 days	0.2
TCGA-CV-7180-01A	34 years, male, white, stage:Stage II, dead, 327 days	0.2
TCGA-MZ-A6I9-01A	68 years, male, white, stage:'--, dead, 489 days	0.2
TCGA-CN-A6V7-01A	40 years, male, white, stage:Stage IVA, alive, 594 days	0.2
TCGA-QK-A6IF-01A	61 years, male, white, stage:'--, alive, 704 days	0.2
TCGA-CV-5442-01A	76 years, female, white, stage:Stage IVA, alive, 2327 days	0.2
TCGA-QK-A6II-01A	52 years, male, white, stage:Stage IVA, dead, 284 days	0.2
TCGA-HD-A634-01A	56 years, male, white, stage:Stage IVA, dead, 130 days	0.1
TCGA-P3-A5QE-01A	49 years, male, white, stage:Stage III, alive, 1559 days	0.1
TCGA-P3-A5Q5-01A	54 years, male, white, stage:Stage IVA, alive, 910 days	0.1
TCGA-F7-A624-01A	73 years, male, white, stage:Stage II, alive, 378 days	0.1
TCGA-CR-6467-01A	59 years, male, white, stage:Stage III, alive, 1777 days	0.1
TCGA-CN-6021-01A	63 years, female, white, stage:'--, dead, 276 days	0.1
TCGA-D6-A6EM-01A	65 years, female, white, stage:Stage III, alive, 232 days	0.1
TCGA-CV-7253-01A	58 years, male, black or african american, stage:Stage IVA, dead, 361 days	0.1
TCGA-CR-6487-01A	50 years, male, white, stage:Stage I, alive, 234 days	0.1
TCGA-BB-8601-01A	84 years, male, black or african american, stage:Stage III, alive, 624 days	0.1
TCGA-CR-5248-01A	53 years, male, white, stage:'--, alive, 1663 days	0.1
Show allShow less

HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0008930003	Tumor	2.8
CPT0245550003	Tumor	2.6
CPT0169640003	Tumor	2.5
CPT0194800003	Normal	2.3
CPT0169890003	Tumor	1.9
CPT0250310003	Tumor	1.9
CPT0245400003	Tumor	1.8
CPT0235460003	Tumor	1.5
CPT0163650003	Tumor	1.4
CPT0162990004	Tumor	1.4
CPT0245010003	Tumor	1.3
CPT0163340003	Tumor	1.2
CPT0163480003	Tumor	1.2
CPT0220610003	Tumor	1.2
CPT0226440003	Tumor	1.0
CPT0207870004	Tumor	1.0
CPT0177200003	Tumor	0.9
CPT0199820003	Tumor	0.9
CPT0222360003	Tumor	0.9
CPT0237620004	Tumor	0.8
CPT0246620003	Tumor	0.7
CPT0246590003	Tumor	0.7
CPT0194250003	Tumor	0.6
CPT0222180003	Tumor	0.6
CPT0195880003	Normal	0.6
CPT0094280004	Tumor	0.6
CPT0162940003	Tumor	0.5
CPT0087990003	Tumor	0.5
CPT0194260003	Normal	0.4
CPT0094420004	Tumor	0.3
CPT0163790003	Tumor	0.3
CPT0094560004	Tumor	0.3
CPT0248330003	Tumor	0.2
CPT0123260003	Tumor	0.2
CPT0226340003	Tumor	0.2
CPT0220620003	Normal	0.2
CPT0244890004	Tumor	0.2
CPT0013030003	Normal	0.1
CPT0094350004	Tumor	0.1
CPT0195700003	Normal	0.0
CPT0169730003	Tumor	0.0
CPT0237480004	Tumor	0.0
CPT0196210003	Tumor	-0.1
CPT0261520003	Tumor	-0.2
CPT0163090003	Tumor	-0.2
C3N-01859-04	Normal	-0.2
CPT0245190003	Normal	-0.2
CPT0123280003	Normal	-0.2
CPT0256560003	Tumor	-0.3
CPT0226090003	Normal	-0.3
CPT0163160003	Tumor	-0.3
CPT0169920003	Normal	-0.3
CPT0245730003	Tumor	-0.3
CPT0163530003	Tumor	-0.3
CPT0123190003	Normal	-0.3
CPT0088410003	Tumor	-0.3
CPT0223970003	Tumor	-0.3
CPT0095040003	Tumor	-0.4
CPT0199890003	Normal	-0.4
CPT0024810003	Tumor	-0.4
CPT0235910003	Tumor	-0.4
CPT0163840003	Tumor	-0.4
CPT0088430003	Normal	-0.5
CPT0194960003	Tumor	-0.5
C3N-04279-05	Normal	-0.5
CPT0194420003	Tumor	-0.5
CPT0177220003	Normal	-0.5
CPT0163170003	Normal	-0.5
CPT0088080003	Normal	-0.5
CPT0201860004	Normal	-0.6
CPT0011290003	Tumor	-0.6
CPT0011320003	Normal	-0.6
CPT0245140003	Normal	-0.6
CPT0088060004	Tumor	-0.6
CPT0245350003	Tumor	-0.6
CPT0243090003	Tumor	-0.6
CPT0237150003	Normal	-0.6
CPT0226030003	Tumor	-0.6
CPT0243140004	Normal	-0.7
CPT0245300003	Tumor	-0.7
CPT0245060004	Tumor	-0.7
CPT0163490003	Normal	-0.7
CPT0123180003	Tumor	-0.7
CPT0245230004	Tumor	-0.7
CPT0184530003	Tumor	-0.7
CPT0127050003	Tumor	-0.7
CPT0245130003	Tumor	-0.7
C3N-02693-06	Normal	-0.7
CPT0199830003	Normal	-0.7
CPT0237640003	Normal	-0.8
CPT0008630003	Tumor	-0.8
CPT0008960003	Normal	-0.8
CPT0245560003	Normal	-0.8
CPT0201830004	Tumor	-0.8
CPT0162890003	Tumor	-0.8
CPT0013000004	Tumor	-0.8
CPT0245600003	Tumor	-0.8
CPT0084650004	Normal	-0.9
CPT0223460003	Normal	-0.9
CPT0195680003	Tumor	-0.9
CPT0177710003	Tumor	-0.9
CPT0176770003	Tumor	-0.9
CPT0084630009	Tumor	-0.9
CPT0248350003	Normal	-0.9
CPT0226450003	Normal	-0.9
CPT0237130004	Tumor	-0.9
CPT0199880003	Tumor	-0.9
CPT0245020003	Normal	-0.9
CPT0190860003	Normal	-0.9
CPT0163020003	Normal	-0.9
CPT0241980004	Tumor	-0.9
CPT0196060003	Normal	-0.9
CPT0088010003	Normal	-0.9
CPT0245180003	Tumor	-1.0
CPT0226270003	Normal	-1.0
CPT0199710003	Normal	-1.0
CPT0163240003	Tumor	-1.0
CPT0222200003	Normal	-1.0
CPT0163910003	Tumor	-1.0
CPT0163800003	Normal	-1.0
CPT0163860003	Normal	-1.0
CPT0199700003	Tumor	-1.0
CPT0244940004	Tumor	-1.0
CPT0094580003	Normal	-1.1
CPT0246540003	Tumor	-1.1
CPT0248520003	Tumor	-1.1
CPT0195860003	Tumor	-1.1
CPT0246670003	Tumor	-1.1
CPT0196040003	Tumor	-1.2
CPT0242000004	Normal	-1.2
CPT0163610003	Normal	-1.2
CPT0236870003	Normal	-1.2
C3N-04275-05	Normal	-1.2
CPT0194790003	Tumor	-1.2
CPT0245500003	Tumor	-1.2
CPT0226350003	Normal	-1.2
CPT0177390003	Tumor	-1.3
CPT0245630003	Tumor	-1.3
C3N-01620-05	Normal	-1.4
CPT0163600003	Tumor	-1.4
CPT0223450003	Tumor	-1.4
C3N-04276-06	Normal	-1.5
CPT0226250004	Tumor	-1.5
CPT0237500003	Normal	-1.5
CPT0163740003	Tumor	-1.5
CPT0235920003	Normal	-1.6
CPT0190850003	Tumor	-1.6
CPT0245410003	Normal	-1.7
CPT0163720003	Normal	-1.7
CPT0226130003	Tumor	-1.8
C3N-01758-04	Normal	-1.9
CPT0236850004	Tumor	-2.0
CPT0094490004	Tumor	-2.1
CPT0177010003	Tumor	-2.3
C3N-00857-05	Normal	-2.4
CPT0087820003	Tumor	N/A
CPT0011130005	Tumor	N/A
CPT0163410003	Tumor	N/A
CPT0236620003	Tumor	N/A
CPT0163250003	Normal	N/A
CPT0229230003	Normal	N/A
CPT0245680003	Tumor	N/A
CPT0278700002	Normal	N/A
CPT0245460003	Normal	N/A
CPT0236640003	Normal	N/A
CPT0281470002	Normal	N/A
C3N-00295-05	Normal	N/A
CPT0013430003	Tumor	N/A
CPT0013130003	Tumor	N/A
CPT0229220002	Normal	N/A
CPT0163430003	Normal	N/A
CPT0226400003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0013250003	Normal	N/A
CPT0008520008	Tumor	N/A
CPT0013210004	Tumor	N/A
CPT0245450003	Tumor	N/A
CPT0226390003	Tumor	N/A
CPT0229210003	Tumor	N/A
CPT0013460003	Normal	N/A
CPT0169740004	Normal	N/A
CPT0229190003	Tumor	N/A
CPT0235470002	Normal	N/A
Show allShow less

HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody CAB002742
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS