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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYTL2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
37.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
35.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
25.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
16.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
10.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
10.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
2.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
2.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYTL2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
240.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
194.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
188.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
157.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
156.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
153.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
139.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
135.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
135.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
130.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
128.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
127.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
120.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
117.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
113.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
113.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
112.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
111.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
110.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
104.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
102.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
101.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
98.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
97.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
94.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
93.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
91.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
91.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
91.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
87.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
85.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
83.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
83.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
83.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
83.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
82.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
82.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
81.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
79.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
78.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
77.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
77.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
75.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
74.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
72.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
70.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
69.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
69.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
68.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
68.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
68.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
67.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
67.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
66.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
66.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
66.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
66.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
65.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
65.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
64.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
62.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
62.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
61.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
61.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
60.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
60.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
60.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
59.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
59.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
58.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
57.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
56.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
56.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
56.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
56.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
55.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
54.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
53.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
52.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
52.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
52.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
51.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
50.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
50.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
50.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
50.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
50.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
50.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
50.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
49.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
49.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
49.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
49.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
48.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
47.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
47.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
46.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
46.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
46.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
45.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
45.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
45.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
45.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
45.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
44.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
44.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
44.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
44.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
44.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
43.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
43.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
43.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
42.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
42.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
42.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
42.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
41.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
40.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
40.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
40.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
40.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
40.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
40.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
40.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
39.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
39.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
39.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
39.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
39.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
39.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
38.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
38.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
38.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
37.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
37.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
37.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
37.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
37.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
37.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
36.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
36.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
36.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
36.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
35.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
34.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
34.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
34.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
33.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
33.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
33.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
33.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
32.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
32.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
32.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
32.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
32.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
32.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
32.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
31.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
31.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
31.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
31.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
31.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
30.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
30.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
30.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
30.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
30.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
30.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
29.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
29.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
29.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
28.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
28.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
28.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
28.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
28.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
28.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
27.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
26.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
26.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
26.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
25.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
25.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
25.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
25.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
25.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
25.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
24.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
24.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
23.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
23.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
23.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
22.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
21.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
21.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
21.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
21.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
21.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
20.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
19.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
19.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
18.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
18.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
18.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
17.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
16.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
15.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
14.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
14.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
13.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
11.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
9.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
7.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
7.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
7.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
7.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
7.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
6.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
6.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
6.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
6.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
6.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
5.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
5.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
5.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
5.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
5.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
5.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
5.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
5.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
4.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
4.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
4.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
4.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
4.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
4.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
3.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
3.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
3.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
2.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYTL2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
266.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
202.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
188.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
174.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
172.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
165.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
154.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
150.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
148.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
143.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
137.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
129.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
123.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
110.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
106.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
106.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
105.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
104.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
94.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
81.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
81.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
80.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
77.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
76.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
75.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
74.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
74.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
72.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
69.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
67.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
66.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
65.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
64.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
63.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
61.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
60.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
57.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
57.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
56.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
55.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
54.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
54.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
54.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
54.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
53.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
51.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
51.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
50.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
50.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
48.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
45.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
45.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
44.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
42.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
41.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
33.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
32.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
31.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
27.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
24.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
24.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
23.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
10.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
7.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
6.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
4.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
4.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYTL2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
265.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
250.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
220.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
181.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
146.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
136.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
135.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
126.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
116.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
112.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
110.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
107.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
104.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
101.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
98.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
98.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
97.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
96.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
94.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
93.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
91.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
87.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
86.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
85.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
85.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
85.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
83.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
83.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
83.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
83.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
81.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
81.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
80.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
79.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
79.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
77.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
76.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
74.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
71.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
70.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
68.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
68.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
67.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
66.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
66.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
65.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
65.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
65.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
64.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
64.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
64.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
61.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
61.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
61.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
60.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
60.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
60.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
59.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
59.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
59.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
59.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
59.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
58.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
58.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
58.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
55.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
54.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
54.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
53.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
53.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
52.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
52.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
51.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
51.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
49.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
48.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
48.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
47.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
47.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
47.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
46.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
46.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
45.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
45.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
44.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
44.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
44.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
44.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
43.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
42.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
42.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
41.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
41.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
41.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
41.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
40.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
39.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
39.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
39.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
38.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
38.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
38.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
37.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
37.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
37.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
36.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
36.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
35.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
35.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
35.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
35.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
34.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
34.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
34.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
33.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
33.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
33.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
32.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
31.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
31.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
31.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
31.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
30.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
30.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
30.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
30.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
29.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
28.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
28.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
27.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
27.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
27.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
25.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
25.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
24.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
23.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
23.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
23.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
23.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
22.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
21.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
21.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
20.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
20.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
19.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
19.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
19.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
4.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
3.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
3.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
2.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012280003
Tumor
1.6
CPT0088480003
Tumor
1.6
CPT0023350003
Tumor
1.4
CPT0021240003
Tumor
1.3
CPT0069000003
Tumor
1.3
CPT0025050003
Tumor
1.3
CPT0025230003
Tumor
1.3
CPT0019130003
Tumor
1.2
CPT0012550003
Tumor
1.1
CPT0001180009
Tumor
1.0
CPT0076330003
Tumor
1.0
CPT0081600003
Tumor
0.9
CPT0011240003
Tumor
0.9
CPT0025580004
Tumor
0.9
CPT0014450004
Tumor
0.8
CPT0086950003
Tumor
0.8
CPT0002350011
Tumor
0.8
CPT0079380003
Tumor
0.7
CPT0066480003
Tumor
0.7
CPT0017850003
Tumor
0.7
CPT0006900003
Tumor
0.7
CPT0075130003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0015810003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0092190003
Normal
0.5
CPT0025110003
Tumor
0.5
CPT0088630003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0075170001
Normal
0.3
CPT0065750003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0084560003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0078800003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0002270011
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0014370004
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0086970003
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0065930003
Tumor
-0.2
CPT0018250001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0010170001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0024670003
Tumor
-0.3
CPT0066520001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0065430003
Tumor
-0.3
CPT0025920001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0063630003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0078990003
Tumor
-0.4
CPT0026420001
Normal
-0.4
CPT0006530001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0064370003
Tumor
-0.4
CPT0007470001
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0065810003
Tumor
-0.4
CPT0086830003
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0001350001
Normal
-0.4
CPT0081880003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0001550001
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0077310003
Tumor
-0.4
CPT0078530001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0000890001
Normal
-0.5
CPT0088710001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0092310003
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0019160001
Normal
-0.5
CPT0006950001
Normal
-0.5
CPT0001500009
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0089480003
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0089040001
Normal
-0.5
CPT0086370003
Normal
-0.6
CPT0079000001
Normal
-0.6
CPT0023360001
Normal
-0.6
CPT0079430001
Normal
-0.6
CPT0025880003
Tumor
-0.6
CPT0076350001
Normal
-0.6
CPT0077500001
Normal
-0.6
CPT0009060003
Tumor
-0.6
CPT0000790001
Normal
-0.6
CPT0025610001
Normal
-0.7
CPT0026410003
Tumor
-0.7
CPT0088780001
Normal
-0.7
CPT0078840001
Normal
-0.7
CPT0079410003
Tumor
-0.7
CPT0092740003
Normal
-0.7
CPT0065450001
Normal
-0.7
CPT0014350001
Normal
-0.7
CPT0025350003
Tumor
-0.8
CPT0077140001
Normal
-0.8
CPT0023710001
Normal
-0.8
CPT0088690003
Tumor
-0.9
CPT0001220008
Tumor
-0.9
CPT0069160003
Tumor
-0.9
CPT0088550004
Tumor
-0.9
CPT0001260009
Tumor
-0.9
CPT0000870016
Tumor
-0.9
CPT0000780007
Tumor
-1.1
CPT0001540009
Tumor
-1.2
CPT0012180003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.