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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAF8 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
25.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
25.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
18.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
18.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
17.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
16.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
12.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAF8 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
38.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
27.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
21.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
18.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
17.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
16.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
16.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
15.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
15.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
15.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
14.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
14.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
14.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
12.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
12.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
12.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
12.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
12.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
11.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
11.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
11.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
11.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
11.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
10.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
10.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
10.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
10.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
10.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
9.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
9.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
9.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
9.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
9.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
9.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
8.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
8.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
8.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
8.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
8.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
8.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
7.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
7.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
7.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
7.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
7.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
7.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
7.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
7.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
7.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
7.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
7.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
7.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
7.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
7.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
7.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
7.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
6.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
6.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
6.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
6.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
6.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
5.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
5.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
5.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
4.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
4.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
4.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
4.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAF8 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
21.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
14.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
12.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
12.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
11.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
11.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
11.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
10.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
9.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
9.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
9.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
9.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
9.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
8.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
8.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
7.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
7.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
7.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
6.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
6.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
5.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
5.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAF8 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
141.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
75.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
71.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
49.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
39.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
28.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
27.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
26.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
25.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
24.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
23.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
21.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
21.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
21.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
21.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
19.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
17.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
17.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
17.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
16.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
15.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
15.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
14.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
14.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
14.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
13.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
13.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
12.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
11.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
11.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
11.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
11.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
10.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
10.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
10.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
9.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
9.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
9.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
8.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
8.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
8.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
8.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
8.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
8.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
7.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
7.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
7.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
7.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
7.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
7.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
7.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
6.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
6.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
6.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
5.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
4.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
4.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0010120001
Normal
0.8
CPT0017410003
Tumor
0.7
CPT0001500009
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0065810003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0078670001
Normal
0.5
CPT0001350001
Normal
0.4
CPT0014160003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0009020003
Normal
0.3
CPT0089480003
Normal
0.3
CPT0025050003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0024680001
Normal
0.3
CPT0012550003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0088760003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0081620001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0088570001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0086030003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0012920003
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0076350001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0077500001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0012280003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0001260009
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0025880003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0001230001
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0014130001
Normal
-0.3
CPT0081880003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0078510003
Tumor
-0.4
CPT0078660003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0092190003
Normal
-0.6
CPT0000640003
Tumor
-0.6
CPT0079510001
Normal
-0.6
CPT0089020003
Tumor
-0.8
CPT0001340003
Tumor
-0.8
CPT0075130003
Tumor
-0.8
CPT0001180009
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0082010001
Normal
N/A
CPT0001190001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0063320003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0081990003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
