HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.8 nTPM
HPA Brain:29.7 nTPM
GTEx:17.8 nTPM
FANTOM5:11.4 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:15.3 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030162Antibody HPA030174
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 29.7
Sample id Sample description nTPM
Hippocampus
nTPM: 24.7
2621 Female, age 67, right hemisphere 30.7
2529 Female, age 94, left hemisphere 24.8
2148 Female, age 91, left hemisphere 24.5
1855 Male, age 76, left hemisphere 24.2
1898 Male, age 80, left hemisphere 23.5
1911 Female, age 85, right hemisphere 20.6
Dentate gyrus
nTPM: 23.9
2531 Female, age 67, both hemispheres 28.3
2530 Female, age 94, left hemisphere 27.4
1927 Female, age 91, both hemispheres 25.8
2246 Female, age 85, both hemispheres 22.6
2010 Male, age 76, both hemispheres 19.8
2528 Male, age 74, both hemispheres 19.8
Entorhinal gyrus
nTPM: 28.9
2613 Female, age 94, left hemisphere 36.8
2686 Male, age 75, right hemisphere 30.8
2764 Male, age 80, right hemisphere 30.8
1787 Male, age 76, left hemisphere 28.5
1938 Female, age 85, left hemisphere 26.6
2117 Female, age 91, right hemisphere 20.2
Hippocampus, CA1
nTPM: 21.8
2749 Male, age 80, left hemisphere 23.6
1873 Female, age 85, both hemispheres 22.5
2527 Male, age 74, both hemispheres 22.3
2082 Female, age 91, right hemisphere 20.5
2045 Male, age 76, both hemispheres 19.9
Hippocampus, CA2
nTPM: 24.2
2437 Female, age 94, left hemisphere 32.0
1892 Male, age 76, both hemispheres 29.3
1963 Male, age 80, left hemisphere 25.0
1940 Female, age 85, left hemisphere 21.1
2113 Female, age 91, right hemisphere 20.6
2249 Male, age 74, both hemispheres 17.2
Hippocampus, CA3
nTPM: 23.9
2861 Female, age 67, both hemispheres 36.8
2620 Female, age 94, left hemisphere 24.5
1867 Male, age 76, both hemispheres 22.4
2137 Male, age 80, left hemisphere 22.2
1891 Female, age 85, both hemispheres 21.0
2436 Male, age 74, both hemispheres 16.6
Parahippocampal cortex
nTPM: 28.3
2622 Female, age 67, right hemisphere 37.5
2245 Female, age 91, both hemispheres 30.5
2532 Female, age 72, left hemisphere 30.5
2692 Male, age 74, both hemispheres 28.3
2693 Female, age 94, both hemispheres 28.2
2250 Female, age 67, right hemisphere 26.9
1850 Male, age 80, both hemispheres 26.4
1933 Female, age 85, both hemispheres 26.0
1990 Female, age 91, right hemisphere 25.6
2018 Male, age 76, both hemispheres 23.0
Perirhinal gyrus
nTPM: 29.7
1794 Male, age 80, right hemisphere 31.8
2848 Male, age 76, right hemisphere 29.9
1841 Female, age 85, right hemisphere 29.1
1847 Female, age 91, left hemisphere 29.1
2521 Female, age 94, right hemisphere 28.6
Subiculum
nTPM: 23.0
2438 Female, age 94, left hemisphere 28.1
2619 Male, age 74, both hemispheres 27.0
1977 Female, age 85, both hemispheres 25.1
1901 Male, age 80, both hemispheres 21.8
2042 Male, age 76, both hemispheres 18.6
2729 Female, age 91, right hemisphere 17.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 34.7
Min nTPM: 6.0
Std nTPM: 5.3
Median nTPM: 17.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 34.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 34.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 30.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 28.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 28.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 27.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 27.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 27.2
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 26.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.4
FF:10153-102I9 76 years, female 15.6
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 7.5
Pig sample Sample description nTPM
Subiculum
nTPM: 7.5
Samples: 4

Max nTPM: 10.3
Min nTPM: 5.1
Sample A Female 10.3
Sample B Female 6.4
Sample C Male 8.1
Sample D Male 5.1
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 4.7
Sample A Female 7.8
Sample B Female 6.8
Sample C Male 8.4
Sample D Male 4.7
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.9
Sample A Female 7.1
Sample B Female 6.1
Sample C Male 8.4
Sample D Male 5.9
Ventral hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 9.8
Min nTPM: 4.9
Sample A Female 7.1
Sample B Female 4.9
Sample C Male 9.8
Sample D Male 6.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 16.0
Min nTPM: 14.3
Sample A Male 16.0
Sample B Male 15.2
Sample C Female 14.3
Sample D Female 15.8
Hippocampal formation
nTPM: 13.4
Samples: 4

Max nTPM: 18.3
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 14.0
Sample C Female 12.2
Sample D Female 18.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
2234 Antisense, RP_040526_01_E10, Mouse strain C57BL/6J (56 days, male) 6.4
2236 Antisense, RP_040526_01_E10, Mouse strain C57BL/6J (56 days, male) 0.0

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