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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIF13A is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
37.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
32.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
30.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
27.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
26.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
26.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
25.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
25.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
25.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
25.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
24.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
24.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
23.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
23.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
23.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
22.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
22.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
22.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
21.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
21.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
20.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
20.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
20.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
19.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
19.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
19.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
18.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
18.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
18.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
18.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
17.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
17.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
17.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
17.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
16.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
16.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
16.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
15.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
15.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
15.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
15.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
15.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
15.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
15.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
15.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
15.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
14.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
14.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
14.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
14.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
14.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
14.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
14.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
13.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
13.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
12.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
12.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
12.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
12.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
12.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
12.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
11.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
11.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
11.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
11.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
11.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
11.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
11.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
11.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
11.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
11.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
11.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
10.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
10.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
10.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
10.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
10.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
10.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
9.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
9.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
9.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
9.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
9.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
9.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
9.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
9.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
9.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
9.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
9.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
8.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
8.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
8.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
8.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
8.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
8.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
7.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
7.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
7.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
7.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
7.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
7.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
6.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
6.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
6.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
5.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
4.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
2.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
2.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIF13A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.2
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
26.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
20.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
17.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
17.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
15.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
11.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
11.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
9.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
9.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
9.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
8.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
7.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
7.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
7.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
7.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
7.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
6.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
6.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
6.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
6.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
6.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
6.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
6.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
6.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
6.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
5.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
5.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
5.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
5.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
5.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
5.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
5.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
5.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
5.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
5.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
5.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
4.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
4.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
4.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
4.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
4.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
4.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
4.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
4.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
4.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
4.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
4.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
4.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
3.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
3.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
3.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
3.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
3.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
3.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
3.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
3.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
3.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
3.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
3.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
3.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
3.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
3.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
3.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
3.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
2.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
2.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
2.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
2.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
2.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
2.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
2.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
2.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
2.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
2.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
2.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
2.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
2.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
2.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
2.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
2.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
2.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
2.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
2.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
2.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
2.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
2.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
2.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
2.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
2.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
1.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
1.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
1.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
1.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
1.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
1.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
1.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
1.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
1.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
0.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
1.0
131
Tumor
0.9
977
Tumor
0.7
957
Tumor
0.7
635
Tumor
0.7
921
Tumor
0.6
112
Tumor
0.6
497
Tumor
0.5
917
Tumor
0.5
695
Tumor
0.5
147
Tumor
0.5
545
Tumor
0.5
955
Tumor
0.4
355
Tumor
0.4
1043
Tumor
0.4
553
Tumor
0.4
1041
Tumor
0.4
517
Tumor
0.4
745
Tumor
0.4
815
Tumor
0.4
958
Normal
0.4
913
Tumor
0.4
343
Tumor
0.3
912
Normal
0.3
127
Tumor
0.3
484
Normal
0.3
663
Tumor
0.3
463
Tumor
0.3
737
Tumor
0.3
527
Tumor
0.3
743
Tumor
0.3
951
Tumor
0.3
435
Tumor
0.3
923
Tumor
0.3
755
Tumor
0.3
493
Tumor
0.3
533
Tumor
0.3
823
Tumor
0.2
1022
Normal
0.2
477
Tumor
0.2
554
Normal
0.2
421
Tumor
0.2
741
Tumor
0.2
1045
Tumor
0.2
924
Normal
0.2
528
Normal
0.2
873
Tumor
0.2
488
Normal
0.2
916
Normal
0.2
714
Normal
0.2
882
Normal
0.2
968
Normal
0.2
313
Tumor
0.2
125
Tumor
0.2
191
Tumor
0.2
964
Normal
0.2
482
Normal
0.2
448
Normal
0.2
537
Tumor
0.2
412
Normal
0.2
728
Normal
0.2
524
Normal
0.2
518
Normal
0.2
523
Tumor
0.2
723
Tumor
0.2
327
Tumor
0.2
171
Tumor
0.2
981
Tumor
0.2
341
Tumor
0.2
455
Tumor
0.2
1014
Normal
0.2
221
Tumor
0.2
918
Normal
0.2
1028
Normal
0.2
431
Tumor
0.2
665
Tumor
0.2
915
Tumor
0.2
514
Normal
0.2
478
Normal
0.2
416
Normal
0.2
698
Normal
0.2
952
Normal
0.2
494
Normal
0.2
956
Normal
0.2
911
Tumor
0.2
685
Tumor
0.2
516
Normal
0.2
546
Normal
0.2
866
Normal
0.2
818
Normal
0.2
515
Tumor
0.2
937
Tumor
0.2
228
Normal
0.2
926
Normal
0.2
536
Normal
0.2
756
Normal
0.2
284
Normal
0.2
354
Normal
0.2
433
Tumor
0.2
1046
Normal
0.2
616
Normal
0.1
738
Normal
0.1
1013
Tumor
0.1
1044
Normal
0.1
696
Normal
0.1
778
Normal
0.1
816
Normal
0.1
487
Tumor
0.1
364
Normal
0.1
492
Normal
0.1
716
Normal
0.1
286
Normal
0.1
474
Normal
0.1
884
Normal
0.1
976
Normal
0.1
214
Normal
0.1
213
Tumor
0.1
617
Tumor
0.1
356
Normal
0.1
444
Normal
0.1
132
Normal
0.1
1015
Tumor
0.1
715
Tumor
0.1
445
Tumor
0.1
574
Normal
0.1
742
Normal
0.1
558
Normal
0.1
572
Normal
0.1
386
Normal
0.1
878
Normal
0.1
1032
Normal
0.1
746
Normal
0.1
196
Normal
0.1
277
Tumor
0.1
851
Tumor
0.1
472
Normal
0.1
568
Normal
0.1
212
Normal
0.1
426
Normal
0.1
984
Normal
0.1
862
Normal
0.1
864
Normal
0.1
218
Normal
0.1
978
Normal
0.1
975
Tumor
0.1
1042
Normal
0.1
1027
Tumor
0.1
858
Normal
0.1
922
Normal
0.1
868
Normal
0.1
666
Normal
0.1
224
Normal
0.1
538
Normal
0.1
491
Tumor
0.1
396
Normal
0.1
384
Normal
0.1
648
Normal
0.1
824
Normal
0.1
392
Normal
0.1
534
Normal
0.1
446
Normal
0.1
357
Tumor
0.1
232
Normal
0.1
966
Normal
0.1
148
Normal
0.1
368
Normal
0.1
257
Tumor
0.1
231
Tumor
0.1
982
Normal
0.1
385
Tumor
0.1
938
Normal
0.1
944
Normal
0.1
564
Normal
0.1
722
Normal
0.1
914
Normal
0.1
285
Tumor
0.1
925
Tumor
0.1
1026
Normal
0.1
358
Normal
0.1
526
Normal
0.1
867
Tumor
0.1
328
Normal
0.1
415
Tumor
0.1
272
Normal
0.1
376
Normal
0.1
424
Normal
0.1
271
Tumor
0.1
456
Normal
0.1
641
Tumor
0.1
883
Tumor
0.1
481
Tumor
0.1
498
Normal
0.1
874
Normal
0.1
1025
Tumor
0.1
432
Normal
0.1
278
Normal
0.1
557
Tumor
0.1
513
Tumor
0.1
394
Normal
0.0
786
Normal
0.0
1021
Tumor
0.0
434
Normal
0.0
443
Tumor
0.0
332
Normal
0.0
314
Normal
0.0
447
Tumor
0.0
664
Normal
0.0
136
Normal
0.0
138
Normal
0.0
192
Normal
0.0
1016
Normal
0.0
817
Tumor
0.0
777
Tumor
0.0
436
Normal
0.0
466
Normal
0.0
344
Normal
0.0
727
Tumor
0.0
852
Normal
0.0
483
Tumor
0.0
312
Normal
0.0
128
Normal
0.0
362
Normal
0.0
1031
Tumor
0.0
126
Normal
0.0
258
Normal
0.0
268
Normal
0.0
785
Tumor
0.0
954
Normal
0.0
414
Normal
0.0
686
Normal
0.0
353
Tumor
0.0
671
Tumor
0.0
462
Normal
0.0
342
Normal
0.0
298
Normal
0.0
185
Tumor
0.0
142
Normal
0.0
464
Normal
0.0
943
Tumor
0.0
423
Tumor
0.0
222
Normal
0.0
468
Normal
0.0
422
Normal
0.0
744
Normal
0.0
471
Tumor
0.0
672
Normal
0.0
662
Normal
0.0
352
Normal
0.0
861
Tumor
0.0
428
Normal
0.0
865
Tumor
0.0
366
Normal
0.0
186
Normal
0.0
563
Tumor
0.0
146
Normal
0.0
187
Tumor
0.0
877
Tumor
0.0
388
Normal
0.0
721
Tumor
0.0
172
Normal
0.0
261
Tumor
0.0
628
Normal
0.0
331
Tumor
0.0
473
Tumor
0.0
642
Normal
0.0
965
Tumor
0.0
395
Tumor
0.0
963
Tumor
0.0
262
Normal
0.0
162
Normal
0.0
135
Tumor
0.0
387
Tumor
-0.1
145
Tumor
-0.1
813
Tumor
-0.1
452
Normal
-0.1
124
Normal
-0.1
114
Normal
-0.1
983
Tumor
-0.1
161
Tumor
-0.1
311
Tumor
-0.1
627
Tumor
-0.1
863
Tumor
-0.1
383
Tumor
-0.1
461
Tumor
-0.1
615
Tumor
-0.1
535
Tumor
-0.1
451
Tumor
-0.1
188
Normal
-0.1
375
Tumor
-0.1
814
Normal
-0.1
195
Tumor
-0.1
618
Normal
-0.1
137
Tumor
-0.1
111
Normal
-0.1
636
Normal
-0.1
283
Tumor
-0.1
881
Tumor
-0.2
413
Tumor
-0.2
363
Tumor
-0.2
467
Tumor
-0.2
297
Tumor
-0.2
123
Tumor
-0.2
724
Normal
-0.2
217
Tumor
-0.2
113
Tumor
-0.2
141
Tumor
-0.2
365
Tumor
-0.2
953
Tumor
-0.2
525
Tumor
-0.2
427
Tumor
-0.2
647
Tumor
-0.2
361
Tumor
-0.2
411
Tumor
-0.2
391
Tumor
-0.2
465
Tumor
-0.3
367
Tumor
-0.3
567
Tumor
-0.3
857
Tumor
-0.3
571
Tumor
-0.3
393
Tumor
-0.3
697
Tumor
-0.3
223
Tumor
-0.3
267
Tumor
-0.3
661
Tumor
-0.3
713
Tumor
-0.3
351
Tumor
-0.4
573
Tumor
-0.4
227
Tumor
-0.5
211
Tumor
-0.5
967
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
