HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:101.7 nTPM
HPA Brain:91.0 nTPM
GTEx:101.7 nTPM
FANTOM5:76.7 Scaled Tags Per Million
Pig:76.6 nTPM
Mouse:144.2 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044905
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 91.0
Sample id Sample description nTPM
Hippocampus
nTPM: 69.6
1898 Male, age 80, left hemisphere 92.9
1855 Male, age 76, left hemisphere 77.7
2621 Female, age 67, right hemisphere 69.4
2148 Female, age 91, left hemisphere 61.5
1911 Female, age 85, right hemisphere 60.7
2529 Female, age 94, left hemisphere 55.6
Dentate gyrus
nTPM: 71.7
1927 Female, age 91, both hemispheres 82.6
2010 Male, age 76, both hemispheres 80.5
2530 Female, age 94, left hemisphere 76.3
2528 Male, age 74, both hemispheres 66.1
2246 Female, age 85, both hemispheres 63.7
2531 Female, age 67, both hemispheres 61.0
Entorhinal gyrus
nTPM: 74.3
2764 Male, age 80, right hemisphere 90.3
1938 Female, age 85, left hemisphere 84.0
1787 Male, age 76, left hemisphere 78.0
2613 Female, age 94, left hemisphere 75.4
2686 Male, age 75, right hemisphere 60.6
2117 Female, age 91, right hemisphere 57.7
Hippocampus, CA1
nTPM: 79.5
2749 Male, age 80, left hemisphere 110.8
2045 Male, age 76, both hemispheres 82.3
1873 Female, age 85, both hemispheres 77.7
2527 Male, age 74, both hemispheres 67.6
2082 Female, age 91, right hemisphere 59.4
Hippocampus, CA2
nTPM: 73.8
1892 Male, age 76, both hemispheres 101.2
1963 Male, age 80, left hemisphere 83.6
2437 Female, age 94, left hemisphere 73.1
2249 Male, age 74, both hemispheres 65.8
1940 Female, age 85, left hemisphere 62.9
2113 Female, age 91, right hemisphere 56.3
Hippocampus, CA3
nTPM: 74.6
1867 Male, age 76, both hemispheres 87.3
2620 Female, age 94, left hemisphere 78.6
2137 Male, age 80, left hemisphere 74.7
2436 Male, age 74, both hemispheres 72.5
1891 Female, age 85, both hemispheres 70.7
2861 Female, age 67, both hemispheres 63.9
Parahippocampal cortex
nTPM: 71.0
1850 Male, age 80, both hemispheres 96.0
1933 Female, age 85, both hemispheres 81.9
1990 Female, age 91, right hemisphere 75.5
2018 Male, age 76, both hemispheres 73.9
2693 Female, age 94, both hemispheres 68.7
2245 Female, age 91, both hemispheres 68.6
2250 Female, age 67, right hemisphere 66.1
2532 Female, age 72, left hemisphere 65.6
2692 Male, age 74, both hemispheres 59.2
2622 Female, age 67, right hemisphere 54.8
Perirhinal gyrus
nTPM: 91.0
1847 Female, age 91, left hemisphere 113.0
1794 Male, age 80, right hemisphere 103.0
1841 Female, age 85, right hemisphere 89.2
2848 Male, age 76, right hemisphere 78.3
2521 Female, age 94, right hemisphere 71.4
Subiculum
nTPM: 64.0
1977 Female, age 85, both hemispheres 79.8
1901 Male, age 80, both hemispheres 75.8
2619 Male, age 74, both hemispheres 63.5
2042 Male, age 76, both hemispheres 59.4
2729 Female, age 91, right hemisphere 53.5
2438 Female, age 94, left hemisphere 52.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 101.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.7
Samples: 197

Max nTPM: 220.7
Min nTPM: 47.5
Std nTPM: 32.9
Median nTPM: 93.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 220.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 200.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 197.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 186.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 184.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 179.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 174.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 171.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 168.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 162.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 159.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 76.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.7
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 75.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 76.6
Pig sample Sample description nTPM
Subiculum
nTPM: 68.9
Samples: 4

Max nTPM: 87.7
Min nTPM: 60.7
Sample A Female 87.7
Sample B Female 60.7
Sample C Male 64.1
Sample D Male 62.9
Dorsal hippocampus
nTPM: 76.6
Samples: 4

Max nTPM: 102.2
Min nTPM: 62.6
Sample A Female 102.2
Sample B Female 75.3
Sample C Male 66.3
Sample D Male 62.6
Entorhinal cortex
nTPM: 68.4
Samples: 4

Max nTPM: 76.0
Min nTPM: 60.2
Sample A Female 75.0
Sample B Female 76.0
Sample C Male 60.2
Sample D Male 62.2
Ventral hippocampus
nTPM: 71.2
Samples: 4

Max nTPM: 78.6
Min nTPM: 55.6
Sample A Female 75.8
Sample B Female 55.6
Sample C Male 78.6
Sample D Male 74.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 144.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 144.2
Samples: 4

Max nTPM: 158.5
Min nTPM: 134.4
Sample A Male 134.4
Sample B Male 158.5
Sample C Female 145.4
Sample D Female 138.3
Hippocampal formation
nTPM: 139.8
Samples: 4

Max nTPM: 157.1
Min nTPM: 124.9
Sample A Male 157.1
Sample B Male 130.1
Sample C Female 124.9
Sample D Female 146.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
69174493 Antisense, RP_050329_02_D09, Mouse strain C57BL/6J (56 days, male) 10.1

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