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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF38 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
70.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
29.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
26.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
26.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
26.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
21.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
21.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
20.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
20.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
17.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
15.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
15.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
14.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
13.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
10.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
9.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
8.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
8.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF38 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
46.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
31.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
31.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
29.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
28.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
28.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
28.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
28.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
28.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
27.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
26.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
25.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
25.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
25.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
25.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
24.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
24.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
23.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
23.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
23.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
23.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
23.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
22.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
22.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
22.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
22.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
22.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
21.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
21.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
21.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
21.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
20.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
20.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
20.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
20.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
19.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
19.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
19.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
18.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
18.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
18.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
18.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
17.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
17.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
17.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
17.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
16.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
15.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
15.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
15.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
15.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
14.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
13.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
12.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
12.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
11.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
11.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
10.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
9.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
8.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
8.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
7.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
6.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
5.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
4.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
4.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
3.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF38 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
32.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
29.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
28.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
27.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
24.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
23.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
23.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
22.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
22.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
19.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
19.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
17.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
15.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
13.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
9.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
8.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
7.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
5.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
5.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF38 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
43.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
39.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
34.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
30.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
27.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
27.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
26.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
24.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
22.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
20.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
20.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
19.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
18.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
17.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
15.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
14.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
13.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
13.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
13.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
13.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
13.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
12.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
12.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
12.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
12.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
12.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
11.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
11.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
10.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
10.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
10.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
9.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
9.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
9.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
9.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
8.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
8.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
6.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
6.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
6.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
6.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
6.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
6.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
5.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
5.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
3.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
