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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MRPL50 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
29.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
19.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
19.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
17.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
17.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
16.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
15.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
15.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
14.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
14.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
14.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
13.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
13.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
13.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
13.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
12.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
12.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
12.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
12.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
12.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
11.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
11.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
10.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
10.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
10.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
10.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
10.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
9.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
9.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
9.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
9.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
9.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
9.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
9.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
8.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
8.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
8.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
8.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
8.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
8.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
8.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
7.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
7.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
7.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
7.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
6.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
6.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
6.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
6.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
6.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
6.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
6.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
6.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
6.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
6.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
6.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
5.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
5.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
5.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
5.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
5.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
4.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
4.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
4.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
4.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
4.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
4.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
4.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
4.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
4.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
4.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
4.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
4.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
3.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
3.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
3.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
3.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
3.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
3.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
3.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
3.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
3.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
3.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
2.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
2.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
2.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
2.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
2.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
2.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
2.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
2.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
2.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MRPL50 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.0
Number of samples
231
Samples
Sample
Description
TPM
DO45145
0 years, male, NA, stage:3, dead, 60 days
104.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
90.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
57.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
54.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
53.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
50.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
47.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
45.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
44.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
43.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
43.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
41.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
41.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
41.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
40.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
39.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
39.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
38.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
38.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
37.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
36.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
36.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
36.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
36.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
35.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
35.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
35.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
34.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
33.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
33.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
32.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
32.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
31.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
31.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
31.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
31.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
31.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
31.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
30.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
30.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
30.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
29.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
29.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
28.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
28.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
28.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
28.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
28.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
28.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
27.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
27.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
27.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
27.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
26.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
26.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
26.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
26.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
26.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
26.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
26.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
26.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
26.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
25.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
25.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
25.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
25.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
25.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
25.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
25.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
25.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
25.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
24.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
24.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
24.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
24.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
24.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
24.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
24.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
24.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
24.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
24.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
24.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
24.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
23.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
23.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
23.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
23.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
23.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
22.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
22.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
22.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
22.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
21.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
21.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
21.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
21.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
21.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
21.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
21.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
21.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
20.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
20.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
20.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
20.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
20.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
20.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
20.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
20.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
20.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
19.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
19.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
19.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
19.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
19.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
19.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
19.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
19.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
19.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
18.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
18.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
18.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
18.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
18.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
18.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
18.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
17.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
17.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
17.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
17.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
17.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
17.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
17.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
17.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
17.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
17.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
16.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
16.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
16.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
16.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
16.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
16.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
16.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
16.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
16.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
16.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
16.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
16.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
15.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
15.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
15.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
15.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
15.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
15.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
15.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
15.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
15.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
14.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
14.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
14.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
14.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
14.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
14.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
14.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
13.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
13.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
13.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
13.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
13.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
13.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
13.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
12.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
12.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
12.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
11.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
10.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
9.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
9.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
9.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
865
Tumor
1.1
1041
Tumor
1.1
473
Tumor
0.9
741
Tumor
0.8
685
Tumor
0.8
557
Tumor
0.8
267
Tumor
0.8
227
Tumor
0.8
911
Tumor
0.7
967
Tumor
0.7
435
Tumor
0.7
533
Tumor
0.7
361
Tumor
0.6
915
Tumor
0.6
411
Tumor
0.6
553
Tumor
0.6
525
Tumor
0.6
231
Tumor
0.6
715
Tumor
0.6
393
Tumor
0.6
1025
Tumor
0.6
367
Tumor
0.6
351
Tumor
0.6
477
Tumor
0.5
483
Tumor
0.5
981
Tumor
0.5
883
Tumor
0.5
537
Tumor
0.5
221
Tumor
0.5
1021
Tumor
0.5
285
Tumor
0.5
277
Tumor
0.5
951
Tumor
0.5
187
Tumor
0.4
937
Tumor
0.4
861
Tumor
0.4
353
Tumor
0.4
171
Tumor
0.4
195
Tumor
0.4
957
Tumor
0.4
213
Tumor
0.4
823
Tumor
0.4
363
Tumor
0.4
271
Tumor
0.4
413
Tumor
0.4
497
Tumor
0.4
331
Tumor
0.4
665
Tumor
0.4
743
Tumor
0.4
913
Tumor
0.3
713
Tumor
0.3
1043
Tumor
0.3
327
Tumor
0.3
571
Tumor
0.3
527
Tumor
0.3
257
Tumor
0.3
851
Tumor
0.3
627
Tumor
0.3
355
Tumor
0.3
481
Tumor
0.3
1013
Tumor
0.3
427
Tumor
0.3
147
Tumor
0.3
463
Tumor
0.3
395
Tumor
0.3
721
Tumor
0.3
261
Tumor
0.3
921
Tumor
0.2
423
Tumor
0.2
493
Tumor
0.2
127
Tumor
0.2
467
Tumor
0.2
491
Tumor
0.2
977
Tumor
0.2
357
Tumor
0.2
867
Tumor
0.2
314
Normal
0.2
517
Tumor
0.2
113
Tumor
0.2
185
Tumor
0.2
567
Tumor
0.2
223
Tumor
0.2
471
Tumor
0.2
535
Tumor
0.2
925
Tumor
0.2
191
Tumor
0.2
877
Tumor
0.2
431
Tumor
0.2
451
Tumor
0.2
923
Tumor
0.2
416
Normal
0.2
523
Tumor
0.1
868
Normal
0.1
573
Tumor
0.1
938
Normal
0.1
356
Normal
0.1
965
Tumor
0.1
926
Normal
0.1
785
Tumor
0.1
663
Tumor
0.1
983
Tumor
0.1
862
Normal
0.1
724
Normal
0.1
297
Tumor
0.1
272
Normal
0.1
745
Tumor
0.1
881
Tumor
0.1
513
Tumor
0.1
365
Tumor
0.1
414
Normal
0.1
662
Normal
0.1
728
Normal
0.1
482
Normal
0.1
564
Normal
0.0
341
Tumor
0.0
375
Tumor
0.0
755
Tumor
0.0
123
Tumor
0.0
864
Normal
0.0
455
Tumor
0.0
1015
Tumor
0.0
666
Normal
0.0
963
Tumor
0.0
953
Tumor
0.0
641
Tumor
0.0
922
Normal
0.0
858
Normal
0.0
697
Tumor
0.0
258
Normal
0.0
366
Normal
0.0
131
Tumor
0.0
671
Tumor
0.0
722
Normal
0.0
145
Tumor
0.0
546
Normal
0.0
617
Tumor
0.0
1028
Normal
0.0
391
Tumor
0.0
516
Normal
0.0
383
Tumor
0.0
358
Normal
0.0
914
Normal
0.0
214
Normal
0.0
727
Tumor
0.0
884
Normal
0.0
364
Normal
0.0
141
Tumor
0.0
384
Normal
0.0
916
Normal
0.0
268
Normal
0.0
1016
Normal
0.0
415
Tumor
0.0
328
Normal
0.0
278
Normal
0.0
572
Normal
0.0
514
Normal
0.0
944
Normal
-0.1
188
Normal
-0.1
976
Normal
-0.1
815
Tumor
-0.1
128
Normal
-0.1
817
Tumor
-0.1
312
Normal
-0.1
635
Tumor
-0.1
1031
Tumor
-0.1
232
Normal
-0.1
368
Normal
-0.1
958
Normal
-0.1
738
Normal
-0.1
866
Normal
-0.1
286
Normal
-0.1
298
Normal
-0.1
964
Normal
-0.1
112
Tumor
-0.1
975
Tumor
-0.1
615
Tumor
-0.1
114
Normal
-0.1
487
Tumor
-0.1
196
Normal
-0.1
723
Tumor
-0.1
412
Normal
-0.1
484
Normal
-0.1
857
Tumor
-0.1
1022
Normal
-0.1
664
Normal
-0.1
568
Normal
-0.1
388
Normal
-0.1
695
Tumor
-0.1
943
Tumor
-0.1
616
Normal
-0.1
362
Normal
-0.1
526
Normal
-0.1
137
Tumor
-0.1
1042
Normal
-0.1
852
Normal
-0.1
554
Normal
-0.1
311
Tumor
-0.1
387
Tumor
-0.1
472
Normal
-0.1
647
Tumor
-0.1
148
Normal
-0.1
628
Normal
-0.1
982
Normal
-0.1
818
Normal
-0.1
968
Normal
-0.1
376
Normal
-0.1
396
Normal
-0.1
956
Normal
-0.1
462
Normal
-0.1
343
Tumor
-0.1
136
Normal
-0.1
474
Normal
-0.2
742
Normal
-0.2
528
Normal
-0.2
574
Normal
-0.2
545
Tumor
-0.2
211
Tumor
-0.2
447
Tumor
-0.2
642
Normal
-0.2
698
Normal
-0.2
426
Normal
-0.2
421
Tumor
-0.2
186
Normal
-0.2
912
Normal
-0.2
563
Tumor
-0.2
284
Normal
-0.2
394
Normal
-0.2
313
Tumor
-0.2
494
Normal
-0.2
534
Normal
-0.2
132
Normal
-0.2
162
Normal
-0.2
466
Normal
-0.2
954
Normal
-0.2
648
Normal
-0.2
786
Normal
-0.2
1027
Tumor
-0.2
446
Normal
-0.2
422
Normal
-0.2
714
Normal
-0.2
342
Normal
-0.2
212
Normal
-0.2
142
Normal
-0.2
756
Normal
-0.2
918
Normal
-0.2
432
Normal
-0.2
874
Normal
-0.2
1014
Normal
-0.2
824
Normal
-0.2
436
Normal
-0.2
863
Tumor
-0.2
111
Normal
-0.2
217
Tumor
-0.2
1032
Normal
-0.2
262
Normal
-0.2
966
Normal
-0.2
461
Tumor
-0.2
352
Normal
-0.2
1045
Tumor
-0.2
443
Tumor
-0.2
778
Normal
-0.3
558
Normal
-0.3
386
Normal
-0.3
618
Normal
-0.3
524
Normal
-0.3
465
Tumor
-0.3
433
Tumor
-0.3
518
Normal
-0.3
955
Tumor
-0.3
392
Normal
-0.3
878
Normal
-0.3
873
Tumor
-0.3
952
Normal
-0.3
222
Normal
-0.3
135
Tumor
-0.3
636
Normal
-0.3
444
Normal
-0.3
228
Normal
-0.3
672
Normal
-0.3
716
Normal
-0.3
1026
Normal
-0.3
354
Normal
-0.3
744
Normal
-0.3
661
Tumor
-0.3
283
Tumor
-0.3
424
Normal
-0.3
434
Normal
-0.3
984
Normal
-0.3
125
Tumor
-0.3
924
Normal
-0.3
488
Normal
-0.3
428
Normal
-0.3
746
Normal
-0.3
126
Normal
-0.3
224
Normal
-0.3
814
Normal
-0.3
445
Tumor
-0.3
332
Normal
-0.4
172
Normal
-0.4
696
Normal
-0.4
478
Normal
-0.4
146
Normal
-0.4
138
Normal
-0.4
816
Normal
-0.4
385
Tumor
-0.4
917
Tumor
-0.4
161
Tumor
-0.4
464
Normal
-0.4
498
Normal
-0.4
737
Tumor
-0.4
468
Normal
-0.4
192
Normal
-0.4
777
Tumor
-0.4
882
Normal
-0.4
218
Normal
-0.4
1044
Normal
-0.5
492
Normal
-0.5
456
Normal
-0.5
978
Normal
-0.5
686
Normal
-0.5
536
Normal
-0.5
344
Normal
-0.5
515
Tumor
-0.5
452
Normal
-0.5
1046
Normal
-0.5
425
Tumor
-0.5
124
Normal
-0.6
813
Tumor
-0.6
448
Normal
-0.6
538
Normal
-0.7
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
