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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIF12 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
253.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
123.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
110.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
107.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
106.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
102.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
100.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
91.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
81.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
79.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
78.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
76.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
74.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
73.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
72.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
72.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
68.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
65.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
63.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
62.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
61.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
58.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
56.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
56.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
55.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
51.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
49.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
48.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
46.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
44.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
42.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
42.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
41.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
40.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
39.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
37.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
37.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
37.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
37.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
36.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
36.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
35.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
35.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
33.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
32.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
32.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
29.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
29.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
28.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
26.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
25.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
25.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
24.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
23.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
23.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
22.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
22.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
22.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
21.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
21.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
21.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
21.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
21.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
20.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
20.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
20.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
20.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
19.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
19.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
19.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
18.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
18.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
18.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
18.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
17.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
17.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
17.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
17.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
17.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
16.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
16.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
16.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
16.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
16.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
15.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
15.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
15.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
14.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
14.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
14.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
14.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
13.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
13.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
13.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
13.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
13.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
12.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
12.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
11.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
11.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
11.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
11.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
11.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
10.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
10.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
10.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
10.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
9.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
9.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
9.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
9.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
9.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
9.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
8.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
8.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
8.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
8.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
7.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
7.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
6.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
6.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
6.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
5.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
5.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
5.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
5.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
5.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
5.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
4.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
4.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
4.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
4.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
4.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
4.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
4.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
4.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
4.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
4.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
4.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
4.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
4.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
3.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
3.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
3.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
3.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
3.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
3.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
3.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
3.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
3.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
3.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
2.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
2.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
2.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
2.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
2.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
2.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
2.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
2.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
2.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
2.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
2.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
2.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
2.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
2.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
0.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
0.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
0.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
0.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
0.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
0.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
0.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
0.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIF12 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.6
Number of samples
231
Samples
Sample
Description
TPM
DO45305
0 years, male, NA, stage:4, alive, 300 days
384.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
267.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
222.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
191.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
184.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
146.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
124.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
112.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
106.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
102.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
85.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
78.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
75.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
73.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
70.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
67.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
66.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
62.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
60.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
60.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
59.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
54.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
53.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
52.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
47.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
46.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
46.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
45.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
43.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
42.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
41.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
40.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
39.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
36.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
35.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
35.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
33.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
33.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
32.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
32.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
31.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
31.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
31.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
30.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
30.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
29.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
28.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
28.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
27.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
27.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
26.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
26.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
25.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
25.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
25.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
24.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
24.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
24.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
24.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
24.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
23.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
23.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
23.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
23.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
22.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
22.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
21.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
21.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
21.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
20.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
19.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
19.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
19.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
19.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
19.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
19.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
19.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
19.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
18.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
18.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
18.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
17.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
17.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
17.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
16.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
15.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
14.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
14.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
13.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
13.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
13.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
13.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
12.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
11.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
11.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
11.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
10.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
10.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
10.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
10.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
10.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
10.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
9.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
9.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
8.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
8.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
8.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
7.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
6.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
5.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
4.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
4.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
4.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
3.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
3.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
3.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
3.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
3.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
3.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
3.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
3.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
3.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
2.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
2.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
2.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
2.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
2.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
2.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
2.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
2.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
2.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
2.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
1.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
1.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
1.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
1.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
1.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
0.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
0.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
0.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
0.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
0.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
635
Tumor
1.8
981
Tumor
1.2
1022
Normal
1.2
882
Normal
1.2
912
Normal
1.1
298
Normal
1.0
1032
Normal
1.0
477
Tumor
1.0
428
Normal
1.0
1028
Normal
1.0
464
Normal
1.0
414
Normal
1.0
878
Normal
0.9
824
Normal
0.9
456
Normal
0.8
884
Normal
0.8
952
Normal
0.8
818
Normal
0.8
422
Normal
0.8
714
Normal
0.8
858
Normal
0.7
695
Tumor
0.7
128
Normal
0.7
114
Normal
0.7
964
Normal
0.7
111
Normal
0.7
342
Normal
0.7
636
Normal
0.7
1042
Normal
0.7
1027
Tumor
0.6
756
Normal
0.6
436
Normal
0.6
426
Normal
0.6
628
Normal
0.6
1046
Normal
0.6
977
Tumor
0.6
424
Normal
0.6
1013
Tumor
0.6
368
Normal
0.6
484
Normal
0.6
778
Normal
0.6
466
Normal
0.6
698
Normal
0.6
627
Tumor
0.6
786
Normal
0.6
365
Tumor
0.6
393
Tumor
0.6
186
Normal
0.6
616
Normal
0.5
746
Normal
0.5
672
Normal
0.5
376
Normal
0.5
124
Normal
0.5
968
Normal
0.5
366
Normal
0.5
1026
Normal
0.5
526
Normal
0.5
984
Normal
0.5
468
Normal
0.5
431
Tumor
0.5
112
Tumor
0.5
1014
Normal
0.5
332
Normal
0.5
341
Tumor
0.5
944
Normal
0.5
568
Normal
0.5
983
Tumor
0.5
465
Tumor
0.5
744
Normal
0.5
488
Normal
0.5
666
Normal
0.5
196
Normal
0.5
617
Tumor
0.4
1043
Tumor
0.4
148
Normal
0.4
958
Normal
0.4
642
Normal
0.4
938
Normal
0.4
474
Normal
0.4
664
Normal
0.4
127
Tumor
0.4
567
Tumor
0.4
452
Normal
0.4
618
Normal
0.4
222
Normal
0.4
742
Normal
0.4
354
Normal
0.4
615
Tumor
0.4
126
Normal
0.4
162
Normal
0.4
232
Normal
0.4
982
Normal
0.4
558
Normal
0.3
716
Normal
0.3
261
Tumor
0.3
172
Normal
0.3
572
Normal
0.3
278
Normal
0.3
662
Normal
0.3
722
Normal
0.3
966
Normal
0.3
471
Tumor
0.3
448
Normal
0.3
1021
Tumor
0.3
487
Tumor
0.3
648
Normal
0.3
344
Normal
0.3
473
Tumor
0.3
396
Normal
0.3
738
Normal
0.3
686
Normal
0.3
723
Tumor
0.3
362
Normal
0.3
557
Tumor
0.3
564
Normal
0.3
352
Normal
0.3
1041
Tumor
0.2
432
Normal
0.2
696
Normal
0.2
494
Normal
0.2
956
Normal
0.2
816
Normal
0.2
423
Tumor
0.2
954
Normal
0.2
814
Normal
0.2
137
Tumor
0.2
267
Tumor
0.2
312
Normal
0.2
146
Normal
0.2
1016
Normal
0.2
395
Tumor
0.2
743
Tumor
0.2
498
Normal
0.2
384
Normal
0.2
536
Normal
0.2
481
Tumor
0.2
472
Normal
0.2
574
Normal
0.2
976
Normal
0.1
192
Normal
0.1
823
Tumor
0.1
314
Normal
0.1
213
Tumor
0.1
914
Normal
0.1
257
Tumor
0.1
262
Normal
0.1
1031
Tumor
0.1
223
Tumor
0.1
357
Tumor
0.1
228
Normal
0.1
212
Normal
0.1
493
Tumor
0.1
857
Tumor
0.1
978
Normal
0.1
221
Tumor
0.1
563
Tumor
0.1
444
Normal
0.1
358
Normal
0.1
188
Normal
0.1
136
Normal
0.1
138
Normal
0.1
728
Normal
0.1
361
Tumor
0.1
383
Tumor
0.1
132
Normal
0.1
434
Normal
0.1
852
Normal
0.0
427
Tumor
0.0
1044
Normal
0.0
171
Tumor
0.0
231
Tumor
0.0
461
Tumor
0.0
1025
Tumor
0.0
1045
Tumor
0.0
286
Normal
0.0
877
Tumor
0.0
142
Normal
0.0
187
Tumor
0.0
785
Tumor
0.0
881
Tumor
0.0
492
Normal
0.0
113
Tumor
0.0
745
Tumor
0.0
214
Normal
0.0
513
Tumor
0.0
483
Tumor
0.0
268
Normal
0.0
517
Tumor
0.0
185
Tumor
0.0
446
Normal
0.0
445
Tumor
0.0
284
Normal
0.0
641
Tumor
-0.1
388
Normal
-0.1
573
Tumor
-0.1
813
Tumor
-0.1
462
Normal
-0.1
413
Tumor
-0.1
1015
Tumor
-0.1
697
Tumor
-0.1
123
Tumor
-0.1
392
Normal
-0.1
715
Tumor
-0.1
443
Tumor
-0.1
975
Tumor
-0.1
224
Normal
-0.1
218
Normal
-0.1
272
Normal
-0.1
147
Tumor
-0.1
482
Normal
-0.1
451
Tumor
-0.1
967
Tumor
-0.1
514
Normal
-0.1
145
Tumor
-0.1
433
Tumor
-0.1
447
Tumor
-0.2
435
Tumor
-0.2
297
Tumor
-0.2
478
Normal
-0.2
387
Tumor
-0.2
386
Normal
-0.2
665
Tumor
-0.2
125
Tumor
-0.2
516
Normal
-0.2
463
Tumor
-0.2
161
Tumor
-0.2
131
Tumor
-0.2
951
Tumor
-0.2
497
Tumor
-0.2
518
Normal
-0.2
737
Tumor
-0.2
533
Tumor
-0.2
727
Tumor
-0.2
455
Tumor
-0.2
331
Tumor
-0.2
663
Tumor
-0.2
285
Tumor
-0.2
191
Tumor
-0.3
911
Tumor
-0.3
394
Normal
-0.3
141
Tumor
-0.3
271
Tumor
-0.3
554
Normal
-0.3
353
Tumor
-0.3
937
Tumor
-0.3
713
Tumor
-0.3
534
Normal
-0.3
647
Tumor
-0.3
258
Normal
-0.3
421
Tumor
-0.3
217
Tumor
-0.3
135
Tumor
-0.3
671
Tumor
-0.3
943
Tumor
-0.3
741
Tumor
-0.3
227
Tumor
-0.3
963
Tumor
-0.4
883
Tumor
-0.4
195
Tumor
-0.4
313
Tumor
-0.4
391
Tumor
-0.4
922
Normal
-0.4
351
Tumor
-0.4
755
Tumor
-0.4
955
Tumor
-0.4
957
Tumor
-0.4
523
Tumor
-0.4
913
Tumor
-0.4
965
Tumor
-0.4
851
Tumor
-0.5
467
Tumor
-0.5
535
Tumor
-0.5
283
Tumor
-0.5
661
Tumor
-0.5
546
Normal
-0.5
277
Tumor
-0.5
817
Tumor
-0.5
685
Tumor
-0.5
953
Tumor
-0.5
515
Tumor
-0.5
918
Normal
-0.5
571
Tumor
-0.6
777
Tumor
-0.6
528
Normal
-0.6
924
Normal
-0.6
815
Tumor
-0.6
721
Tumor
-0.6
926
Normal
-0.6
343
Tumor
-0.6
538
Normal
-0.7
525
Tumor
-0.7
311
Tumor
-0.7
425
Tumor
-0.7
524
Normal
-0.7
211
Tumor
-0.7
916
Normal
-0.8
491
Tumor
-0.8
367
Tumor
-0.9
375
Tumor
-0.9
553
Tumor
-0.9
527
Tumor
-0.9
385
Tumor
-0.9
545
Tumor
-1.0
537
Tumor
-1.0
724
Normal
-1.1
925
Tumor
-1.1
915
Tumor
-1.2
917
Tumor
-1.2
921
Tumor
-1.4
923
Tumor
-1.7
355
Tumor
N/A
356
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
864
Normal
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
415
Tumor
N/A
416
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
