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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX17 is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.6
Number of samples
254
Samples
Sample
Description
TPM
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
23.3
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
21.9
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
14.8
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
14.6
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
12.6
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
11.2
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
11.1
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
10.8
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
10.8
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
10.6
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
10.5
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
10.1
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
10.1
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
10.1
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
10.0
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
9.9
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
9.8
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
9.8
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
9.6
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
9.6
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
9.6
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
9.4
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
9.3
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
9.2
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
9.2
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
9.2
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
9.1
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
8.9
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
8.9
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
8.8
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
8.8
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
8.7
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
8.7
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
8.7
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
8.6
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
8.6
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
8.5
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
8.5
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
8.5
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
8.5
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
8.4
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
8.3
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
8.3
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
8.3
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
8.2
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
8.2
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
8.1
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
8.1
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
8.1
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
8.1
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
7.9
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
7.9
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
7.8
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
7.8
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
7.8
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
7.7
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
7.7
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
7.7
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
7.6
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
7.6
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
7.6
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
7.6
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
7.6
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
7.5
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
7.5
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
7.4
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
7.4
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
7.3
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
7.3
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
7.3
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
7.2
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
7.2
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
7.2
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
7.2
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
7.2
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
7.2
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
7.2
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
7.2
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
7.1
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
7.1
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
7.0
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
7.0
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
7.0
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
7.0
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
7.0
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
7.0
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
6.9
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
6.9
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
6.9
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
6.9
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
6.9
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
6.8
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
6.8
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
6.8
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
6.8
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
6.8
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
6.8
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
6.8
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
6.8
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
6.8
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
6.7
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
6.7
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
6.7
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
6.7
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
6.7
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
6.7
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
6.7
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
6.6
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
6.6
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
6.6
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
6.6
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
6.6
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
6.6
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
6.6
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
6.6
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
6.6
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
6.5
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
6.5
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
6.5
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
6.5
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
6.5
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
6.5
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
6.5
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
6.5
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
6.4
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
6.4
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
6.4
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
6.4
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
6.4
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
6.4
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
6.4
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
6.4
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
6.3
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
6.3
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
6.3
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
6.3
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
6.3
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
6.2
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
6.2
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
6.2
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
6.2
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
6.2
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
6.2
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
6.2
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
6.2
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
6.2
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
6.2
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
6.1
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
6.1
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
6.1
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
6.1
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
6.1
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
6.1
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
6.1
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
6.0
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
6.0
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
6.0
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
6.0
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
5.9
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
5.9
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
5.9
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
5.9
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
5.9
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
5.8
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
5.8
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
5.8
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
5.8
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
5.7
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
5.7
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
5.7
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
5.6
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
5.6
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
5.6
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
5.6
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
5.6
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
5.6
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
5.5
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
5.5
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
5.4
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
5.4
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
5.4
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
5.4
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
5.4
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
5.4
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
5.3
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
5.3
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
5.3
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
5.2
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
5.2
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
5.2
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
5.2
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
5.2
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
5.1
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
5.1
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
5.1
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
5.1
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
5.1
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
5.0
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.0
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
5.0
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
5.0
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
5.0
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
4.9
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
4.9
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
4.9
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
4.9
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
4.8
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
4.8
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
4.8
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
4.7
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
4.7
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
4.7
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
4.6
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
4.6
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
4.6
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
4.5
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
4.5
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
4.5
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
4.5
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
4.5
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
4.4
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
4.4
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
4.4
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
4.4
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
4.4
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
4.4
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
4.3
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
4.3
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
4.3
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
4.3
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
4.3
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
4.3
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
4.3
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
4.3
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
4.2
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
4.2
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
4.1
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
4.1
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
4.0
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
4.0
TCGA-AA-3675-01A
0 years, male, stage:Stage II, alive, 1431 days
4.0
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
3.9
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
3.8
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
3.8
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
3.6
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
3.6
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
3.6
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
3.3
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
3.3
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
3.1
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
3.1
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
3.0
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
2.7
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX17 is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.0
Number of samples
486
Samples
Sample
Description
TPM
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
41.4
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
38.4
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
37.9
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
37.2
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
36.9
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
36.6
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
36.3
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
36.3
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
36.0
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
35.0
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
34.8
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
34.4
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
34.3
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
34.0
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
33.8
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
33.5
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
33.4
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
33.4
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
33.4
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
33.4
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
33.3
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
33.2
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
33.1
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
33.1
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
33.1
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
32.9
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
32.6
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
32.4
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
32.4
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
32.3
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
32.2
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
32.1
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
32.0
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
31.9
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
31.9
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
31.9
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
31.9
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
31.9
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
31.7
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
31.7
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
31.4
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
31.4
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
31.3
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
31.2
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
31.2
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
31.1
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
31.1
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
31.0
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
31.0
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
30.9
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
30.9
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
30.9
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
30.8
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
30.7
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
30.6
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
30.5
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
30.5
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
30.5
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
30.5
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
30.4
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
30.2
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
30.2
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
30.1
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
30.1
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
30.0
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
29.8
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
29.7
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
29.7
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
29.6
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
29.6
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
29.5
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
29.4
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
29.4
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
29.4
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
29.3
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
29.3
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
29.3
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
29.3
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
29.3
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
29.2
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
29.2
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
29.1
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
29.1
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
29.1
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
29.1
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
29.1
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
29.0
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
29.0
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
28.9
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
28.8
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
28.8
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
28.7
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
28.7
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
28.7
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
28.6
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
28.6
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
28.6
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
28.6
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
28.6
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
28.6
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
28.5
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
28.5
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
28.5
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
28.5
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
28.4
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
28.4
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
28.4
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
28.4
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
28.4
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
28.4
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
28.3
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
28.3
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
28.3
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
28.3
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
28.2
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
28.2
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
28.2
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
28.1
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
28.1
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
28.0
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
28.0
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
27.9
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
27.9
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
27.9
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
27.9
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
27.9
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
27.9
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
27.9
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
27.8
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
27.8
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
27.8
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
27.8
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
27.7
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
27.7
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
27.7
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
27.6
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
27.5
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
27.4
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
27.4
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
27.4
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
27.3
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
27.3
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
27.3
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
27.3
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
27.3
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
27.3
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
27.2
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
27.2
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
27.2
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
27.2
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
27.2
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
27.2
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
27.2
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
27.2
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
27.2
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
27.1
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
27.1
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
27.1
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
27.1
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
27.0
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
27.0
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
26.9
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
26.9
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
26.8
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
26.8
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
26.7
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
26.7
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
26.7
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
26.7
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
26.6
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
26.6
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
26.6
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
26.6
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
26.5
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
26.5
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
26.5
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
26.5
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
26.5
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
26.5
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
26.5
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
26.5
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
26.4
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
26.4
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
26.3
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
26.3
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
26.3
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
26.3
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
26.3
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
26.2
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
26.2
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
26.1
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
26.1
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
26.1
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
26.1
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
26.1
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
26.0
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
26.0
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
26.0
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
26.0
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
25.9
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
25.9
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
25.9
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
25.9
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
25.9
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
25.9
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
25.8
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
25.8
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
25.7
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
25.7
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
25.7
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
25.7
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
25.6
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
25.6
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
25.6
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
25.6
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
25.6
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
25.5
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
25.5
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
25.5
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
25.5
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
25.5
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
25.5
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
25.4
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
25.4
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
25.4
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
25.4
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
25.3
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
25.3
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
25.3
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
25.3
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
25.3
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
25.2
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
25.2
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
25.1
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
25.1
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
25.1
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
25.1
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
25.0
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
25.0
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
25.0
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
25.0
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
24.9
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
24.9
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
24.9
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
24.9
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
24.9
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
24.9
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
24.9
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
24.8
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
24.8
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
24.8
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
24.8
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
24.8
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
24.7
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
24.7
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
24.7
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
24.6
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
24.6
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
24.6
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
24.6
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
24.5
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
24.5
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
24.5
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
24.5
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
24.4
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
24.4
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
24.4
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
24.4
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
24.4
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
24.3
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
24.3
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
24.3
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
24.3
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
24.3
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
24.3
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
24.2
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
24.2
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
24.2
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
24.2
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
24.2
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
24.1
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
24.1
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
24.1
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
24.0
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
23.9
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
23.9
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
23.9
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
23.8
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
23.8
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
23.8
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
23.8
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
23.8
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
23.7
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
23.7
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
23.7
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
23.7
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
23.7
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
23.7
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
23.7
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
23.6
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
23.6
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
23.6
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
23.6
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
23.6
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
23.6
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
23.6
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
23.6
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
23.6
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
23.6
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
23.6
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
23.5
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
23.5
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
23.4
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
23.4
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
23.4
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
23.4
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
23.3
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
23.3
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
23.3
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
23.3
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
23.3
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
23.3
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
23.2
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
23.2
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
23.2
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
23.2
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
23.2
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
23.2
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
23.2
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
23.1
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
23.1
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
23.1
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
23.0
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
23.0
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
23.0
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
22.9
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
22.9
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
22.8
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
22.8
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
22.8
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
22.7
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
22.7
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
22.7
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
22.6
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
22.6
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
22.5
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
22.5
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
22.5
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
22.5
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
22.5
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
22.5
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
22.5
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
22.4
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
22.4
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
22.4
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
22.4
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
22.3
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
22.3
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
22.3
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
22.3
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
22.2
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
22.2
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
22.2
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
22.1
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
22.1
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
22.0
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
22.0
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
22.0
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
22.0
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
21.9
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
21.9
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
21.8
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
21.8
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
21.8
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
21.8
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
21.7
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
21.7
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
21.7
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
21.6
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
21.6
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
21.6
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
21.6
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
21.6
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
21.5
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
21.5
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
21.4
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
21.4
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
21.3
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
21.2
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
21.2
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
21.2
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
21.2
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
21.2
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
21.2
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
21.1
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
21.1
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
21.1
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
21.1
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
21.1
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
21.0
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
21.0
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
21.0
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
21.0
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
21.0
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
20.9
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
20.9
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
20.9
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
20.9
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
20.8
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
20.8
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
20.7
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
20.7
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
20.6
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
20.6
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
20.5
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
20.4
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
20.3
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
20.3
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
20.2
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
20.2
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
20.1
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
20.1
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
20.1
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
20.1
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
20.1
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
19.9
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
19.9
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
19.8
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
19.8
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
19.8
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
19.7
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
19.6
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
19.5
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
19.4
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
19.4
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
19.3
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
19.3
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
19.3
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
19.3
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
19.3
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
19.2
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
19.2
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
19.2
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
19.1
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
19.0
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
19.0
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
18.9
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
18.8
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
18.8
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
18.7
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
18.7
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
18.7
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
18.7
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
18.6
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
18.6
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
18.6
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
18.5
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
18.4
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
18.3
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
18.3
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
18.2
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
18.1
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
18.0
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
17.9
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
17.7
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
17.7
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
17.7
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
17.6
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
17.4
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
17.4
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
17.4
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
17.0
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
16.9
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
16.9
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
16.8
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
16.8
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
16.7
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
16.7
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
16.2
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
15.8
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
15.5
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
15.2
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
14.2
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
13.8
U1384
0 years, male, NA, stage:T4N1M0, alive, 1319 days
0.7
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX17 is potential prognostic, high expression is favorable in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.5
Number of samples
88
Samples
Sample
Description
TPM
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
11.7
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
11.5
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
10.3
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
9.9
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
9.5
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
9.4
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
8.9
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
8.9
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
8.8
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
8.6
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
8.5
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
8.5
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
8.4
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
8.4
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
8.4
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
8.4
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
8.3
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
8.2
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
8.0
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
7.9
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
7.8
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
7.6
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
7.6
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
7.6
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
7.5
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
7.5
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
7.4
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
7.4
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
7.3
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
7.3
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
7.3
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
7.3
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
7.1
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
7.1
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
7.1
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
6.9
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
6.9
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
6.9
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
6.8
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
6.8
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
6.8
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
6.7
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
6.7
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
6.6
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
6.6
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
6.6
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
6.5
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
6.5
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
6.3
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
6.3
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
6.3
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
6.2
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
6.2
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
6.1
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
6.1
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
6.1
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
6.0
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
5.9
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
5.8
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
5.7
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
5.7
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
5.6
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
5.6
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
5.5
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
5.4
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
5.3
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
5.3
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
5.3
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
5.2
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
5.1
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
5.1
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
5.0
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
5.0
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
5.0
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
4.9
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
4.9
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
4.7
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
4.4
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
4.3
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
4.1
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
4.1
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
4.1
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
3.9
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
3.8
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
3.8
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
3.7
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
2.7
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX17 is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.0
Number of samples
207
Samples
Sample
Description
TPM
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
42.6
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
36.0
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
35.5
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
35.3
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
35.2
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
34.9
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
34.8
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
33.9
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
33.5
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
32.2
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
32.1
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
32.1
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
31.8
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
31.6
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
31.6
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
31.0
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
31.0
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
30.6
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
30.5
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
30.2
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
30.0
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
29.9
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
29.2
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
29.1
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
29.1
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
29.0
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
28.9
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
28.9
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
28.8
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
28.7
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
28.7
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
28.5
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
28.5
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
28.5
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
28.3
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
28.2
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
28.1
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
27.9
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
27.7
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
27.4
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
27.4
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
27.2
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
27.2
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
27.0
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
27.0
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
27.0
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
26.9
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
26.9
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
26.8
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
26.7
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
26.7
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
26.6
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
26.5
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
26.5
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
26.4
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
26.3
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
26.2
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
26.2
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
26.0
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
26.0
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
26.0
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
25.8
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
25.8
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
25.8
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
25.8
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
25.7
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
25.7
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
25.7
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
25.7
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
25.6
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
25.3
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
25.2
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
25.2
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
25.1
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
25.1
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
25.1
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
25.1
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
25.0
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
25.0
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
25.0
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
25.0
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
25.0
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
24.9
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
24.8
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
24.7
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
24.6
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
24.5
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
24.4
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
24.3
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
24.3
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
24.1
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
24.0
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
24.0
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
23.9
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
23.8
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
23.8
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
23.8
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
23.7
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
23.7
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
23.5
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
23.5
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
23.5
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
23.4
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
23.4
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
23.4
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
23.4
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
23.2
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
23.2
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
23.1
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
23.1
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
23.0
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
22.9
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
22.9
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
22.8
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
22.8
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
22.8
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
22.7
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
22.7
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
22.7
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
22.7
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
22.6
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
22.5
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
22.5
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
22.5
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
22.4
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
22.3
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
22.3
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
22.1
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
22.0
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
22.0
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
22.0
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
21.9
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
21.9
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
21.8
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
21.8
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
21.8
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
21.8
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
21.7
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
21.7
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
21.6
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
21.6
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
21.6
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
21.6
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
21.6
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
21.5
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
21.5
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
21.5
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
21.4
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
21.4
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
21.3
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
21.3
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
21.3
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
21.3
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
21.3
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
21.3
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
21.2
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
21.2
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
21.2
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
21.1
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
21.0
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
21.0
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
21.0
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
21.0
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
20.7
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
20.6
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
20.5
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
20.5
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
20.4
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
20.3
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
20.2
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
20.2
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
20.2
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
20.2
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
20.1
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
20.1
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
19.9
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
19.9
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
19.9
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
19.8
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
19.7
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
19.6
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
19.5
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
19.4
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
19.3
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
19.3
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
19.3
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
19.3
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
19.2
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
19.2
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
19.2
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
19.1
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
19.0
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
18.4
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
18.4
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
18.3
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
18.2
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
17.9
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
17.2
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
17.2
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
17.0
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
16.8
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
16.7
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
16.4
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
16.3
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
15.1
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
13.5
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
13.5
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
a90eb718-6a8f-4cbf-89c1-f9e9bd_D2
Tumor
0.5
176d1b96-8c6e-44fe-8a32-e15194_D2
Normal
0.5
5271982c-5de1-4d6e-b414-b1f3ef_D2
Tumor
0.5
963fc8db-f412-4427-a198-23f660_D2
Normal
0.5
04ded2cd-3b57-4aec-9c11-48f58e_D2
Normal
0.4
f635496c-0046-4ecd-89bc-7a4f33_D2
Tumor
0.4
9a48cf57-e1f0-4ea1-9804-d563f2_D2
Normal
0.4
66b829db-1cdd-460d-b2f3-0e9ca9_D3
Tumor
0.4
7bdfa5c9-d11f-4600-9c44-a87996_D2
Normal
0.4
d6584b4a-ca99-4a2a-8b4e-c8b22e_D3
Tumor
0.4
87b0e853-43ea-4efb-8a22-dd221f_D2
Normal
0.4
0065bfd9-e1b9-43a8-9379-9658ba_D3
Tumor
0.3
5a3aa99d-ca10-45f6-939f-12392a_D2
Normal
0.3
43bc845e-d22e-4c10-b3e8-bc54e6_D2
Normal
0.3
e3c012aa-51c2-42b0-a478-bd620f_D2
Normal
0.3
a2f03d85-5f1a-4b3e-9dbf-74e67e_D3
Tumor
0.3
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Normal
0.3
01d1ffca-4235-4dfe-bf62-56f71d_D3
Tumor
0.3
1f79fed9-f0d4-4c45-acd2-ea1441_D2
Normal
0.3
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Normal
0.3
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Tumor
0.3
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Tumor
0.3
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
411d9597-c785-4de5-b449-29a80d_D2
Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
-0.1
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Normal
-0.1
92f7419c-c57a-4b50-bdc9-4d09ca_D2
Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.2
211cbcef-cb1f-4c80-a1c8-a76d3c_D2
Normal
-0.2
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Normal
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.3
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Tumor
-0.3
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Tumor
-0.3
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Tumor
-0.3
0aef1fe8-ca61-4113-81d0-d82ee7_D2
Tumor
-0.3
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Normal
-0.3
41ee934e-f7a3-4ef5-8a83-e2ac56_D2
Tumor
-0.3
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Normal
-0.4
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Tumor
-0.4
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Tumor
-0.4
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Normal
-0.4
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Tumor
-0.4
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Normal
-0.4
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Tumor
-0.4
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Tumor
-0.4
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Tumor
-0.5
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Normal
-0.7
3d797911-d476-436f-9cce-33e20c_D8
Tumor
-0.8
e1cd3d70-132b-452f-ba10-026721_D2
Tumor
-0.9
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
