HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.3 nTPM
HPA Brain:82.6 nTPM
GTEx:34.3 nTPM
FANTOM5:71.7 Scaled Tags Per Million
Pig:31.8 nTPM
Mouse:12.9 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 82.6
Sample id Sample description nTPM
Hippocampus
nTPM: 79.4
2529 Female, age 94, left hemisphere 98.6
2148 Female, age 91, left hemisphere 86.9
1898 Male, age 80, left hemisphere 79.8
1855 Male, age 76, left hemisphere 72.6
1911 Female, age 85, right hemisphere 70.5
2621 Female, age 67, right hemisphere 68.2
Dentate gyrus
nTPM: 75.2
2528 Male, age 74, both hemispheres 93.6
2530 Female, age 94, left hemisphere 81.7
2531 Female, age 67, both hemispheres 74.7
2246 Female, age 85, both hemispheres 73.0
2010 Male, age 76, both hemispheres 67.3
1927 Female, age 91, both hemispheres 60.9
Entorhinal gyrus
nTPM: 82.6
2117 Female, age 91, right hemisphere 123.4
2764 Male, age 80, right hemisphere 80.6
2686 Male, age 75, right hemisphere 80.2
1938 Female, age 85, left hemisphere 74.8
1787 Male, age 76, left hemisphere 71.9
2613 Female, age 94, left hemisphere 64.7
Hippocampus, CA1
nTPM: 72.0
2527 Male, age 74, both hemispheres 79.9
1873 Female, age 85, both hemispheres 75.6
2082 Female, age 91, right hemisphere 75.2
2749 Male, age 80, left hemisphere 68.3
2045 Male, age 76, both hemispheres 60.8
Hippocampus, CA2
nTPM: 74.4
2113 Female, age 91, right hemisphere 85.2
2437 Female, age 94, left hemisphere 80.5
1963 Male, age 80, left hemisphere 78.0
1892 Male, age 76, both hemispheres 70.8
1940 Female, age 85, left hemisphere 66.8
2249 Male, age 74, both hemispheres 65.2
Hippocampus, CA3
nTPM: 75.5
2861 Female, age 67, both hemispheres 110.4
1891 Female, age 85, both hemispheres 72.1
1867 Male, age 76, both hemispheres 71.5
2137 Male, age 80, left hemisphere 67.7
2620 Female, age 94, left hemisphere 67.1
2436 Male, age 74, both hemispheres 64.1
Parahippocampal cortex
nTPM: 74.8
2692 Male, age 74, both hemispheres 95.8
2622 Female, age 67, right hemisphere 88.2
2245 Female, age 91, both hemispheres 81.4
1990 Female, age 91, right hemisphere 77.5
1933 Female, age 85, both hemispheres 75.0
2532 Female, age 72, left hemisphere 75.0
1850 Male, age 80, both hemispheres 67.3
2250 Female, age 67, right hemisphere 64.2
2018 Male, age 76, both hemispheres 63.3
2693 Female, age 94, both hemispheres 60.4
Perirhinal gyrus
nTPM: 66.4
1847 Female, age 91, left hemisphere 77.3
1794 Male, age 80, right hemisphere 76.7
2521 Female, age 94, right hemisphere 61.2
1841 Female, age 85, right hemisphere 58.3
2848 Male, age 76, right hemisphere 58.2
Subiculum
nTPM: 81.4
2729 Female, age 91, right hemisphere 100.9
2619 Male, age 74, both hemispheres 96.2
2438 Female, age 94, left hemisphere 79.3
1977 Female, age 85, both hemispheres 72.9
2042 Male, age 76, both hemispheres 70.5
1901 Male, age 80, both hemispheres 68.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 34.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.3
Samples: 197

Max nTPM: 76.9
Min nTPM: 15.0
Std nTPM: 11.3
Median nTPM: 31.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 76.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 71.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 64.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 64.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 63.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 62.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 58.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 57.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 57.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 56.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 54.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 71.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.7
FF:10153-102I9 76 years, female 76.0
FF:10169-103B7 60 years, female 67.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 31.8
Pig sample Sample description nTPM
Subiculum
nTPM: 26.9
Samples: 4

Max nTPM: 32.9
Min nTPM: 22.7
Sample A Female 32.9
Sample B Female 25.0
Sample C Male 26.8
Sample D Male 22.7
Dorsal hippocampus
nTPM: 25.2
Samples: 4

Max nTPM: 29.0
Min nTPM: 18.8
Sample A Female 29.0
Sample B Female 26.6
Sample C Male 26.3
Sample D Male 18.8
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 34.6
Min nTPM: 28.3
Sample A Female 32.2
Sample B Female 34.6
Sample C Male 32.0
Sample D Male 28.3
Ventral hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 37.5
Min nTPM: 22.7
Sample A Female 28.8
Sample B Female 22.7
Sample C Male 37.5
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.2
Sample A Male 12.3
Sample B Male 12.2
Sample C Female 12.8
Sample D Female 14.2
Hippocampal formation
nTPM: 11.2
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.5
Sample A Male 9.5
Sample B Male 12.4
Sample C Female 12.5
Sample D Female 10.5

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