HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:32.2 nTPM
HPA Brain:21.7 nTPM
GTEx:32.2 nTPM
FANTOM5:30.3 Scaled Tags Per Million
Pig:24.5 nTPM
Mouse:19.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034598
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 21.7
Sample id Sample description nTPM
Hippocampus
nTPM: 19.0
1898 Male, age 80, left hemisphere 23.3
2621 Female, age 67, right hemisphere 20.0
1855 Male, age 76, left hemisphere 18.7
1911 Female, age 85, right hemisphere 17.7
2148 Female, age 91, left hemisphere 17.5
2529 Female, age 94, left hemisphere 16.7
Dentate gyrus
nTPM: 19.0
2530 Female, age 94, left hemisphere 25.4
2010 Male, age 76, both hemispheres 18.9
2528 Male, age 74, both hemispheres 18.1
1927 Female, age 91, both hemispheres 17.9
2531 Female, age 67, both hemispheres 17.0
2246 Female, age 85, both hemispheres 16.5
Entorhinal gyrus
nTPM: 20.5
2764 Male, age 80, right hemisphere 25.4
1787 Male, age 76, left hemisphere 22.2
2117 Female, age 91, right hemisphere 21.3
2613 Female, age 94, left hemisphere 19.5
1938 Female, age 85, left hemisphere 19.2
2686 Male, age 75, right hemisphere 15.6
Hippocampus, CA1
nTPM: 20.3
2749 Male, age 80, left hemisphere 26.0
2527 Male, age 74, both hemispheres 20.6
1873 Female, age 85, both hemispheres 20.1
2045 Male, age 76, both hemispheres 18.4
2082 Female, age 91, right hemisphere 16.2
Hippocampus, CA2
nTPM: 20.8
1892 Male, age 76, both hemispheres 23.8
1963 Male, age 80, left hemisphere 23.6
2437 Female, age 94, left hemisphere 23.5
2249 Male, age 74, both hemispheres 23.0
1940 Female, age 85, left hemisphere 15.4
2113 Female, age 91, right hemisphere 15.3
Hippocampus, CA3
nTPM: 19.4
2620 Female, age 94, left hemisphere 23.7
2137 Male, age 80, left hemisphere 20.6
1867 Male, age 76, both hemispheres 20.1
2436 Male, age 74, both hemispheres 18.2
1891 Female, age 85, both hemispheres 17.4
2861 Female, age 67, both hemispheres 16.2
Parahippocampal cortex
nTPM: 19.3
1850 Male, age 80, both hemispheres 23.0
2245 Female, age 91, both hemispheres 21.2
1933 Female, age 85, both hemispheres 20.5
1990 Female, age 91, right hemisphere 20.5
2250 Female, age 67, right hemisphere 20.2
2532 Female, age 72, left hemisphere 19.1
2018 Male, age 76, both hemispheres 17.5
2693 Female, age 94, both hemispheres 17.3
2692 Male, age 74, both hemispheres 16.9
2622 Female, age 67, right hemisphere 16.7
Perirhinal gyrus
nTPM: 21.7
1794 Male, age 80, right hemisphere 24.1
1847 Female, age 91, left hemisphere 22.3
2848 Male, age 76, right hemisphere 21.1
1841 Female, age 85, right hemisphere 20.8
2521 Female, age 94, right hemisphere 19.9
Subiculum
nTPM: 19.8
2619 Male, age 74, both hemispheres 22.5
1901 Male, age 80, both hemispheres 21.4
1977 Female, age 85, both hemispheres 20.8
2438 Female, age 94, left hemisphere 18.6
2729 Female, age 91, right hemisphere 18.3
2042 Male, age 76, both hemispheres 17.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 32.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.2
Samples: 197

Max nTPM: 54.4
Min nTPM: 13.4
Std nTPM: 6.6
Median nTPM: 31.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 50.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 46.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 44.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 44.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 43.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 43.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 42.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 42.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 30.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.3
FF:10169-103B7 60 years, female 32.1
FF:10153-102I9 76 years, female 28.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 24.5
Pig sample Sample description nTPM
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 25.1
Min nTPM: 16.7
Sample A Female 25.1
Sample B Female 19.6
Sample C Male 16.7
Sample D Male 19.6
Dorsal hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 29.0
Min nTPM: 22.1
Sample A Female 29.0
Sample B Female 23.2
Sample C Male 22.1
Sample D Male 23.8
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 21.2
Min nTPM: 17.5
Sample A Female 19.1
Sample B Female 21.2
Sample C Male 20.4
Sample D Male 17.5
Ventral hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 25.6
Min nTPM: 18.4
Sample A Female 20.4
Sample B Female 18.4
Sample C Male 22.2
Sample D Male 25.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 19.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.6
Min nTPM: 13.5
Sample A Male 16.9
Sample B Male 17.6
Sample C Female 17.3
Sample D Female 13.5
Hippocampal formation
nTPM: 19.7
Samples: 4

Max nTPM: 21.4
Min nTPM: 17.7
Sample A Male 21.4
Sample B Male 20.7
Sample C Female 17.7
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68633014 Antisense, RP_050125_02_C05, Mouse strain C57BL/6J (56 days, male) 0.4

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