HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:24.1 nTPM
HPA Brain:56.6 nTPM
GTEx:24.1 nTPM
FANTOM5:338.4 Scaled Tags Per Million
Pig:68.0 nTPM
Mouse:94.8 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022949Antibody HPA022963
Glial cells MediumNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 56.6
Sample id Sample description nTPM
Hippocampus
nTPM: 41.9
1898 Male, age 80, left hemisphere 52.0
2148 Female, age 91, left hemisphere 43.5
2529 Female, age 94, left hemisphere 42.3
1855 Male, age 76, left hemisphere 38.9
2621 Female, age 67, right hemisphere 37.5
1911 Female, age 85, right hemisphere 37.3
Dentate gyrus
nTPM: 40.2
1927 Female, age 91, both hemispheres 45.0
2010 Male, age 76, both hemispheres 41.2
2531 Female, age 67, both hemispheres 40.5
2528 Male, age 74, both hemispheres 38.6
2530 Female, age 94, left hemisphere 38.0
2246 Female, age 85, both hemispheres 37.9
Entorhinal gyrus
nTPM: 47.5
2764 Male, age 80, right hemisphere 55.9
1938 Female, age 85, left hemisphere 52.9
1787 Male, age 76, left hemisphere 49.9
2117 Female, age 91, right hemisphere 44.6
2613 Female, age 94, left hemisphere 42.5
2686 Male, age 75, right hemisphere 38.8
Hippocampus, CA1
nTPM: 44.8
2749 Male, age 80, left hemisphere 62.5
2527 Male, age 74, both hemispheres 42.8
1873 Female, age 85, both hemispheres 41.0
2045 Male, age 76, both hemispheres 40.8
2082 Female, age 91, right hemisphere 36.9
Hippocampus, CA2
nTPM: 43.2
1892 Male, age 76, both hemispheres 49.6
1963 Male, age 80, left hemisphere 46.9
1940 Female, age 85, left hemisphere 42.6
2249 Male, age 74, both hemispheres 41.7
2437 Female, age 94, left hemisphere 40.0
2113 Female, age 91, right hemisphere 38.6
Hippocampus, CA3
nTPM: 45.4
2137 Male, age 80, left hemisphere 56.6
2620 Female, age 94, left hemisphere 48.8
2861 Female, age 67, both hemispheres 46.7
1867 Male, age 76, both hemispheres 43.3
2436 Male, age 74, both hemispheres 38.4
1891 Female, age 85, both hemispheres 38.3
Parahippocampal cortex
nTPM: 44.3
1850 Male, age 80, both hemispheres 58.9
2532 Female, age 72, left hemisphere 50.8
1933 Female, age 85, both hemispheres 49.4
1990 Female, age 91, right hemisphere 49.1
2245 Female, age 91, both hemispheres 45.1
2018 Male, age 76, both hemispheres 42.4
2250 Female, age 67, right hemisphere 39.6
2622 Female, age 67, right hemisphere 38.2
2693 Female, age 94, both hemispheres 35.8
2692 Male, age 74, both hemispheres 33.9
Perirhinal gyrus
nTPM: 56.6
1794 Male, age 80, right hemisphere 62.0
1847 Female, age 91, left hemisphere 60.6
2521 Female, age 94, right hemisphere 54.2
2848 Male, age 76, right hemisphere 53.8
1841 Female, age 85, right hemisphere 52.4
Subiculum
nTPM: 39.2
1977 Female, age 85, both hemispheres 50.6
1901 Male, age 80, both hemispheres 43.3
2729 Female, age 91, right hemisphere 39.6
2619 Male, age 74, both hemispheres 35.4
2042 Male, age 76, both hemispheres 33.7
2438 Female, age 94, left hemisphere 32.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.1
Samples: 197

Max nTPM: 40.0
Min nTPM: 13.4
Std nTPM: 4.9
Median nTPM: 23.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 40.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 35.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 34.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 34.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 33.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 33.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 33.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 33.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 32.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 338.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 338.4
FF:10169-103B7 60 years, female 393.6
FF:10153-102I9 76 years, female 283.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 68.0
Pig sample Sample description nTPM
Subiculum
nTPM: 60.3
Samples: 4

Max nTPM: 74.1
Min nTPM: 49.0
Sample A Female 74.1
Sample B Female 63.1
Sample C Male 55.1
Sample D Male 49.0
Dorsal hippocampus
nTPM: 68.0
Samples: 4

Max nTPM: 83.7
Min nTPM: 50.5
Sample A Female 83.7
Sample B Female 74.3
Sample C Male 63.5
Sample D Male 50.5
Entorhinal cortex
nTPM: 59.9
Samples: 4

Max nTPM: 71.3
Min nTPM: 51.6
Sample A Female 71.3
Sample B Female 59.6
Sample C Male 56.9
Sample D Male 51.6
Ventral hippocampus
nTPM: 67.2
Samples: 4

Max nTPM: 77.2
Min nTPM: 58.5
Sample A Female 66.1
Sample B Female 58.5
Sample C Male 77.2
Sample D Male 66.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 94.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.0
Samples: 4

Max nTPM: 75.9
Min nTPM: 71.5
Sample A Male 73.4
Sample B Male 71.5
Sample C Female 75.9
Sample D Female 75.0
Hippocampal formation
nTPM: 94.8
Samples: 4

Max nTPM: 112.5
Min nTPM: 80.3
Sample A Male 89.2
Sample B Male 97.3
Sample C Female 112.5
Sample D Female 80.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
76097709 Antisense, RP_060626_01_C05, Mouse strain C57BL/6J (56 days, male) 8.1

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