HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:2.9 nTPM
HPA Brain:10.6 nTPM
GTEx:2.9 nTPM
FANTOM5:18.2 Scaled Tags Per Million
Pig:38.1 nTPM
Mouse:9.9 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016051Antibody HPA056857
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 10.6
Sample id Sample description nTPM
Hippocampus
nTPM: 8.4
2621 Female, age 67, right hemisphere 10.7
1911 Female, age 85, right hemisphere 9.1
2148 Female, age 91, left hemisphere 8.4
1855 Male, age 76, left hemisphere 8.1
2529 Female, age 94, left hemisphere 7.2
1898 Male, age 80, left hemisphere 6.7
Dentate gyrus
nTPM: 7.9
1927 Female, age 91, both hemispheres 10.6
2531 Female, age 67, both hemispheres 10.5
2528 Male, age 74, both hemispheres 7.5
2530 Female, age 94, left hemisphere 6.9
2246 Female, age 85, both hemispheres 6.2
2010 Male, age 76, both hemispheres 5.9
Entorhinal gyrus
nTPM: 10.3
2686 Male, age 75, right hemisphere 12.0
2613 Female, age 94, left hemisphere 11.2
2764 Male, age 80, right hemisphere 10.4
1938 Female, age 85, left hemisphere 10.3
2117 Female, age 91, right hemisphere 9.6
1787 Male, age 76, left hemisphere 8.5
Hippocampus, CA1
nTPM: 7.5
2527 Male, age 74, both hemispheres 7.9
2749 Male, age 80, left hemisphere 7.7
2045 Male, age 76, both hemispheres 7.6
2082 Female, age 91, right hemisphere 7.6
1873 Female, age 85, both hemispheres 6.8
Hippocampus, CA2
nTPM: 7.9
1892 Male, age 76, both hemispheres 9.8
2437 Female, age 94, left hemisphere 9.2
1940 Female, age 85, left hemisphere 8.9
2113 Female, age 91, right hemisphere 8.0
2249 Male, age 74, both hemispheres 6.4
1963 Male, age 80, left hemisphere 5.2
Hippocampus, CA3
nTPM: 8.3
1867 Male, age 76, both hemispheres 9.0
1891 Female, age 85, both hemispheres 8.9
2436 Male, age 74, both hemispheres 8.9
2861 Female, age 67, both hemispheres 8.4
2620 Female, age 94, left hemisphere 7.3
2137 Male, age 80, left hemisphere 7.0
Parahippocampal cortex
nTPM: 9.3
1850 Male, age 80, both hemispheres 11.4
2693 Female, age 94, both hemispheres 11.2
2622 Female, age 67, right hemisphere 10.2
2245 Female, age 91, both hemispheres 9.7
2250 Female, age 67, right hemisphere 9.0
1990 Female, age 91, right hemisphere 8.9
2532 Female, age 72, left hemisphere 8.9
2018 Male, age 76, both hemispheres 8.4
2692 Male, age 74, both hemispheres 8.3
1933 Female, age 85, both hemispheres 6.9
Perirhinal gyrus
nTPM: 10.6
1847 Female, age 91, left hemisphere 12.0
1794 Male, age 80, right hemisphere 11.8
2848 Male, age 76, right hemisphere 11.3
2521 Female, age 94, right hemisphere 9.1
1841 Female, age 85, right hemisphere 9.0
Subiculum
nTPM: 8.3
2729 Female, age 91, right hemisphere 10.5
2619 Male, age 74, both hemispheres 9.6
1901 Male, age 80, both hemispheres 9.3
1977 Female, age 85, both hemispheres 7.8
2042 Male, age 76, both hemispheres 7.6
2438 Female, age 94, left hemisphere 5.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.9
Samples: 197

Max nTPM: 10.3
Min nTPM: 0.0
Std nTPM: 1.8
Median nTPM: 2.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 10.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 9.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 8.5
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 8.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 8.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 8.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 8.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 7.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 7.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 7.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 7.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 18.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.2
FF:10169-103B7 60 years, female 21.8
FF:10153-102I9 76 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 38.1
Pig sample Sample description nTPM
Subiculum
nTPM: 31.9
Samples: 4

Max nTPM: 37.8
Min nTPM: 28.4
Sample A Female 37.8
Sample B Female 28.4
Sample C Male 30.9
Sample D Male 30.4
Dorsal hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 21.3
Sample A Female 33.9
Sample B Female 29.5
Sample C Male 38.2
Sample D Male 21.3
Entorhinal cortex
nTPM: 38.2
Samples: 4

Max nTPM: 43.1
Min nTPM: 36.1
Sample A Female 36.1
Sample B Female 43.1
Sample C Male 36.3
Sample D Male 37.1
Ventral hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 30.5
Min nTPM: 22.7
Sample A Female 25.6
Sample B Female 22.7
Sample C Male 24.2
Sample D Male 30.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.3
Sample A Male 10.1
Sample B Male 11.3
Sample C Female 8.3
Sample D Female 9.8
Hippocampal formation
nTPM: 7.9
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.3
Sample A Male 9.2
Sample B Male 8.3
Sample C Female 6.3
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68637497 Antisense, RP_050126_01_A07, Mouse strain C57BL/6J (56 days, male) 1.4
71836883 Antisense, RP_051017_02_F01, Mouse strain C57BL/6J (56 days, male) 1.3

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