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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.4
nTPM
HPA Brain:
42.3
nTPM
GTEx:
47.4
nTPM
FANTOM5:
58.1
Scaled Tags Per Million
Pig:
36.2
nTPM
Mouse:
64.5
nTPM
Allen mouse:
11.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.3
Sample id
Sample description
nTPM
Amygdala nTPM: 37.8
2695
Female, age 67, right hemisphere
40.0
2514
Male, age 75, right hemisphere
39.6
1987
Female, age 91, left hemisphere
38.6
2814
Male, age 76, right hemisphere
36.9
2517
Female, age 94, left hemisphere
33.7
Basal amygdala nTPM: 41.1
2243
Female, age 91, right hemisphere
46.6
2685
Female, age 94, left hemisphere
42.3
2110
Male, age 80, left hemisphere
42.2
2827
Female, age 67, right hemisphere
40.0
2609
Male, age 75, right hemisphere
38.7
1955
Male, age 76, both hemispheres
37.1
Central amygdala nTPM: 40.6
2515
Male, age 75, right hemisphere
45.2
2239
Male, age 80, left hemisphere
42.3
2826
Female, age 94, left hemisphere
40.9
1905
Male, age 76, both hemispheres
38.5
2701
Female, age 91, right hemisphere
36.1
Corticomedial amygdala nTPM: 39.2
2829
Male, age 80, left hemisphere
46.3
2535
Female, age 67, right hemisphere
43.0
2428
Male, age 75, right hemisphere
40.1
2429
Female, age 94, left hemisphere
37.5
2242
Female, age 91, right hemisphere
37.0
2240
Male, age 76, both hemispheres
31.3
Lateral amygdala nTPM: 42.3
2256
Male, age 80, left hemisphere
47.3
2534
Female, age 94, left hemisphere
46.8
2830
Female, age 67, right hemisphere
46.1
1883
Male, age 76, both hemispheres
39.4
2516
Male, age 75, right hemisphere
37.1
2255
Female, age 91, right hemisphere
37.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 47.4
Samples: 152
Max nTPM: 122.4
Min nTPM: 24.7
Std nTPM: 11.6
Median nTPM: 46.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
122.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
81.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
78.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
73.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
73.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
68.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
67.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
67.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
64.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
64.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
63.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
63.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
62.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
61.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
61.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
61.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
60.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
60.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
59.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
59.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
58.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
57.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
57.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
57.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
57.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
56.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
56.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
54.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
53.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
53.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
53.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
52.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
51.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
51.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
51.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
51.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
51.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
51.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
50.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
50.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
50.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
50.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
50.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
50.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
50.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
50.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
50.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
49.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
49.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
49.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
49.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
49.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
49.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
49.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
49.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
49.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
49.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
48.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
48.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
48.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
48.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
48.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
48.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
48.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
48.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
48.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
48.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
48.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
47.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
47.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
47.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
47.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
47.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
46.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
46.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
46.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
46.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
46.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
46.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
45.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
45.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
45.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
45.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
45.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
44.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
44.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
44.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
44.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
44.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
44.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
43.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
43.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
43.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
43.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
43.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
43.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
43.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
43.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
42.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
42.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
42.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
42.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
42.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
41.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
41.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
41.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
41.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
41.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
41.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
41.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
41.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
40.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
40.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
39.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
39.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
39.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
39.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
39.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
39.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
39.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
38.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
38.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
38.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
38.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
38.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
37.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
36.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
36.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
36.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
36.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
36.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
35.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
35.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
35.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
35.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
34.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
34.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
34.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
33.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
33.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
32.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
32.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
31.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
31.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
30.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
29.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
29.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
27.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
24.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
64.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 64.6
Samples: 4
Max nTPM: 67.4
Min nTPM: 62.0
Sample A
Male
67.4
Sample B
Male
66.2
Sample C
Female
62.0
Sample D
Female
62.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.