HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:34.9 nTPM
HPA Brain:82.0 nTPM
GTEx:34.9 nTPM
FANTOM5:101.4 Scaled Tags Per Million
Pig:32.6 nTPM
Mouse:25.3 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055338Antibody HPA056015
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 82.0
Sample id Sample description nTPM
Hippocampus
nTPM: 82.0
2529 Female, age 94, left hemisphere 92.8
2148 Female, age 91, left hemisphere 86.4
1911 Female, age 85, right hemisphere 84.8
1855 Male, age 76, left hemisphere 83.7
1898 Male, age 80, left hemisphere 73.0
2621 Female, age 67, right hemisphere 71.5
Dentate gyrus
nTPM: 68.8
2528 Male, age 74, both hemispheres 82.3
2246 Female, age 85, both hemispheres 76.7
2010 Male, age 76, both hemispheres 65.6
2530 Female, age 94, left hemisphere 64.2
2531 Female, age 67, both hemispheres 63.3
1927 Female, age 91, both hemispheres 60.5
Entorhinal gyrus
nTPM: 68.8
2117 Female, age 91, right hemisphere 93.9
1938 Female, age 85, left hemisphere 81.3
1787 Male, age 76, left hemisphere 68.0
2686 Male, age 75, right hemisphere 65.6
2764 Male, age 80, right hemisphere 59.2
2613 Female, age 94, left hemisphere 44.6
Hippocampus, CA1
nTPM: 72.6
2082 Female, age 91, right hemisphere 89.7
1873 Female, age 85, both hemispheres 87.3
2527 Male, age 74, both hemispheres 86.7
2045 Male, age 76, both hemispheres 57.6
2749 Male, age 80, left hemisphere 42.0
Hippocampus, CA2
nTPM: 70.2
2113 Female, age 91, right hemisphere 98.9
1963 Male, age 80, left hemisphere 75.0
2437 Female, age 94, left hemisphere 74.0
1940 Female, age 85, left hemisphere 64.0
2249 Male, age 74, both hemispheres 59.7
1892 Male, age 76, both hemispheres 49.8
Hippocampus, CA3
nTPM: 64.4
2861 Female, age 67, both hemispheres 91.2
1891 Female, age 85, both hemispheres 79.4
2436 Male, age 74, both hemispheres 61.7
1867 Male, age 76, both hemispheres 59.3
2620 Female, age 94, left hemisphere 50.4
2137 Male, age 80, left hemisphere 44.5
Parahippocampal cortex
nTPM: 68.9
1933 Female, age 85, both hemispheres 84.9
2018 Male, age 76, both hemispheres 83.6
2692 Male, age 74, both hemispheres 83.3
2622 Female, age 67, right hemisphere 79.0
2245 Female, age 91, both hemispheres 70.2
2250 Female, age 67, right hemisphere 61.5
1990 Female, age 91, right hemisphere 58.6
1850 Male, age 80, both hemispheres 57.1
2532 Female, age 72, left hemisphere 56.6
2693 Female, age 94, both hemispheres 54.2
Perirhinal gyrus
nTPM: 57.9
1847 Female, age 91, left hemisphere 66.5
1841 Female, age 85, right hemisphere 64.7
1794 Male, age 80, right hemisphere 62.7
2521 Female, age 94, right hemisphere 51.3
2848 Male, age 76, right hemisphere 44.0
Subiculum
nTPM: 73.1
2729 Female, age 91, right hemisphere 104.5
2619 Male, age 74, both hemispheres 91.7
2042 Male, age 76, both hemispheres 64.8
2438 Female, age 94, left hemisphere 62.7
1977 Female, age 85, both hemispheres 62.2
1901 Male, age 80, both hemispheres 52.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 86.6
Min nTPM: 8.5
Std nTPM: 15.5
Median nTPM: 32.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 86.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 83.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 75.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 72.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 71.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 68.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 67.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 67.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 66.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 65.4
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 63.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 101.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.4
FF:10153-102I9 76 years, female 152.9
FF:10169-103B7 60 years, female 49.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.6
Pig sample Sample description nTPM
Subiculum
nTPM: 32.6
Samples: 4

Max nTPM: 39.9
Min nTPM: 27.1
Sample A Female 39.9
Sample B Female 33.0
Sample C Male 30.5
Sample D Male 27.1
Dorsal hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 31.3
Min nTPM: 19.1
Sample A Female 31.3
Sample B Female 23.7
Sample C Male 28.3
Sample D Male 19.1
Entorhinal cortex
nTPM: 26.3
Samples: 4

Max nTPM: 29.2
Min nTPM: 22.1
Sample A Female 28.5
Sample B Female 25.2
Sample C Male 29.2
Sample D Male 22.1
Ventral hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 42.9
Min nTPM: 25.8
Sample A Female 29.3
Sample B Female 26.9
Sample C Male 42.9
Sample D Male 25.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 25.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.8
Samples: 4

Max nTPM: 25.0
Min nTPM: 19.0
Sample A Male 23.0
Sample B Male 19.0
Sample C Female 25.0
Sample D Female 20.1
Hippocampal formation
nTPM: 25.3
Samples: 4

Max nTPM: 30.5
Min nTPM: 22.0
Sample A Male 22.1
Sample B Male 22.0
Sample C Female 30.5
Sample D Female 26.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69980256 Antisense, RP_050512_04_B10, Mouse strain C57BL/6J (56 days, male) 2.5
70608598 Antisense, RP_050630_01_F12, Mouse strain C57BL/6J (56 days, male) 0.4
71213683 Antisense, RP_050816_04_D08, Mouse strain C57BL/6J (56 days, male) 0.4
75080694 Antisense, RP_060412_04_G10, Mouse strain C57BL/6J (56 days, male) 0.3

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