HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:9.5 nTPM
HPA Brain:9.0 nTPM
GTEx:9.5 nTPM
FANTOM5:7.5 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:28.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040242
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.0
Sample id Sample description nTPM
Hippocampus
nTPM: 9.0
1898 Male, age 80, left hemisphere 10.5
1911 Female, age 85, right hemisphere 9.4
2529 Female, age 94, left hemisphere 8.9
1855 Male, age 76, left hemisphere 8.6
2148 Female, age 91, left hemisphere 8.4
2621 Female, age 67, right hemisphere 8.0
Dentate gyrus
nTPM: 7.9
2528 Male, age 74, both hemispheres 10.0
2530 Female, age 94, left hemisphere 8.8
2010 Male, age 76, both hemispheres 8.1
2246 Female, age 85, both hemispheres 6.9
1927 Female, age 91, both hemispheres 6.7
2531 Female, age 67, both hemispheres 6.7
Entorhinal gyrus
nTPM: 6.9
2117 Female, age 91, right hemisphere 8.8
1938 Female, age 85, left hemisphere 7.1
1787 Male, age 76, left hemisphere 7.0
2764 Male, age 80, right hemisphere 6.9
2686 Male, age 75, right hemisphere 6.4
2613 Female, age 94, left hemisphere 5.4
Hippocampus, CA1
nTPM: 7.6
1873 Female, age 85, both hemispheres 9.2
2527 Male, age 74, both hemispheres 7.5
2082 Female, age 91, right hemisphere 7.2
2749 Male, age 80, left hemisphere 7.0
2045 Male, age 76, both hemispheres 6.9
Hippocampus, CA2
nTPM: 8.6
2249 Male, age 74, both hemispheres 10.4
1940 Female, age 85, left hemisphere 8.9
1963 Male, age 80, left hemisphere 8.5
2437 Female, age 94, left hemisphere 8.3
2113 Female, age 91, right hemisphere 8.2
1892 Male, age 76, both hemispheres 7.3
Hippocampus, CA3
nTPM: 8.1
2436 Male, age 74, both hemispheres 11.4
1891 Female, age 85, both hemispheres 8.4
1867 Male, age 76, both hemispheres 7.6
2861 Female, age 67, both hemispheres 7.6
2137 Male, age 80, left hemisphere 7.1
2620 Female, age 94, left hemisphere 6.4
Parahippocampal cortex
nTPM: 6.8
1850 Male, age 80, both hemispheres 9.0
1933 Female, age 85, both hemispheres 7.6
2018 Male, age 76, both hemispheres 7.6
2250 Female, age 67, right hemisphere 7.4
2245 Female, age 91, both hemispheres 6.7
1990 Female, age 91, right hemisphere 6.4
2532 Female, age 72, left hemisphere 6.2
2693 Female, age 94, both hemispheres 6.2
2692 Male, age 74, both hemispheres 6.1
2622 Female, age 67, right hemisphere 5.2
Perirhinal gyrus
nTPM: 7.5
1794 Male, age 80, right hemisphere 8.6
1841 Female, age 85, right hemisphere 8.2
2848 Male, age 76, right hemisphere 7.7
2521 Female, age 94, right hemisphere 6.6
1847 Female, age 91, left hemisphere 6.4
Subiculum
nTPM: 8.0
2729 Female, age 91, right hemisphere 10.4
2042 Male, age 76, both hemispheres 8.6
1901 Male, age 80, both hemispheres 7.8
2619 Male, age 74, both hemispheres 7.2
2438 Female, age 94, left hemisphere 7.1
1977 Female, age 85, both hemispheres 6.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 18.8
Min nTPM: 3.7
Std nTPM: 2.6
Median nTPM: 9.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 18.1
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 16.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 16.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 15.4
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 15.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 15.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 15.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 15.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 14.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 14.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 7.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.5
FF:10153-102I9 76 years, female 8.8
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.0
Pig sample Sample description nTPM
Subiculum
nTPM: 24.6
Samples: 4

Max nTPM: 26.5
Min nTPM: 23.3
Sample A Female 25.3
Sample B Female 26.5
Sample C Male 23.4
Sample D Male 23.3
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 29.9
Min nTPM: 25.3
Sample A Female 29.9
Sample B Female 26.9
Sample C Male 26.0
Sample D Male 25.3
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 22.2
Min nTPM: 15.9
Sample A Female 20.3
Sample B Female 20.5
Sample C Male 22.2
Sample D Male 15.9
Ventral hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 27.9
Min nTPM: 26.1
Sample A Female 27.9
Sample B Female 26.4
Sample C Male 26.1
Sample D Male 27.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 25.8
Min nTPM: 20.6
Sample A Male 22.6
Sample B Male 20.6
Sample C Female 25.8
Sample D Female 23.2
Hippocampal formation
nTPM: 28.8
Samples: 4

Max nTPM: 33.0
Min nTPM: 25.8
Sample A Male 33.0
Sample B Male 27.7
Sample C Female 25.8
Sample D Female 28.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
67978710 Antisense, RP_040923_01_F06, Mouse strain C57BL/6J (56 days, male) 0.1

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