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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS36 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
32.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
31.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
28.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
26.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
21.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
19.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
13.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
12.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
4.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
1.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS36 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
52.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
52.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
29.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
28.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
27.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
27.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
26.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
25.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
25.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
24.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
24.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
24.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
24.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
23.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
23.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
23.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
22.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
22.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
22.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
22.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
22.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
22.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
21.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
21.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
21.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
20.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
20.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
20.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
20.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
20.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
18.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
18.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
18.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
18.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
18.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
18.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
18.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
17.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
17.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
17.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
17.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
16.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
16.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
16.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
16.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
16.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
15.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
12.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
12.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
10.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
7.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
6.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
4.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS36 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
36.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
34.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
34.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
29.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
29.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
28.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
27.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
27.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
26.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
23.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
23.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
23.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
21.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
20.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
19.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
18.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
17.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
16.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
16.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
15.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
11.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS36 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
59.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
47.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
37.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
35.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
35.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
32.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
31.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
30.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
30.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
29.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
27.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
26.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
25.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
24.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
23.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
22.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
22.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
21.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
21.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
21.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
21.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
20.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
19.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
18.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
18.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
18.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
18.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
17.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
16.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
15.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
15.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
13.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
12.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
10.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
9.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
9.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
6.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
5.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
5.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
5.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
4.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
3.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
1.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
0.6
CPT0007320003
Tumor
0.5
CPT0019130003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0078800003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0021240003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0012770003
Normal
0.3
CPT0019990003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0012570003
Normal
0.3
CPT0009080003
Normal
0.3
CPT0020130001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0001350001
Normal
0.3
CPT0012370003
Tumor
0.3
CPT0010160003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0092790003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0025610001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0010170001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0081620001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0001230001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0007860003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0087050003
Normal
0.1
CPT0020020001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0001550001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0075720003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0088760003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0075560003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0025880003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0002350011
Tumor
-0.5
CPT0001340003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
