We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRADC1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
122.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
94.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
83.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
82.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
73.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
72.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
70.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
70.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
69.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
65.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
65.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
65.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
63.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
62.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
61.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
61.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
61.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
60.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
59.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
59.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
59.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
58.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
58.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
57.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
57.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
56.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
56.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
55.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
54.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
54.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
53.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
53.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
53.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
52.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
52.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
52.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
51.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
51.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
51.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
50.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
50.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
50.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
49.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
49.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
49.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
48.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
48.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
48.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
48.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
47.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
47.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
47.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
47.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
46.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
46.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
46.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
46.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
46.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
46.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
46.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
45.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
45.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
45.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
45.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
45.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
45.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
44.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
44.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
44.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
44.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
44.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
44.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
44.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
44.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
43.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
43.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
43.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
43.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
43.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
42.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
42.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
42.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
42.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
42.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
41.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
41.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
41.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
41.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
41.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
41.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
41.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
41.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
40.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
40.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
40.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
40.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
40.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
40.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
40.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
39.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
39.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
39.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
39.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
39.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
39.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
39.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
38.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
38.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
38.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
38.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
38.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
38.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
38.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
37.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
37.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
37.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
37.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
37.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
37.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
37.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
37.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
37.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
36.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
36.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
36.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
36.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
36.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
36.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
36.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
36.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
36.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
36.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
36.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
35.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
35.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
35.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
35.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
35.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
35.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
34.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
34.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
34.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
34.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
34.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
34.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
34.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
34.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
34.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
34.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
33.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
33.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
33.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
33.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
33.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
33.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
33.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
33.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
32.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
32.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
32.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
32.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
32.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
32.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
32.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
32.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
32.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
32.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
32.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
31.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
31.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
31.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
31.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
31.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
31.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
31.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
31.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
31.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
31.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
30.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
30.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
30.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
30.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
30.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
30.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
30.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
30.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
29.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
29.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
29.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
29.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
29.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
28.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
28.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
28.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
28.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
28.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
28.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
28.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
28.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
28.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
28.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
28.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
28.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
27.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
27.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
27.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
27.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
27.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
27.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
26.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
26.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
26.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
26.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
26.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
26.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
26.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
26.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
26.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
26.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
26.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
26.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
26.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
26.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
26.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
25.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
25.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
25.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
25.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
25.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
25.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
25.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
25.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
25.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
25.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
25.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
25.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
24.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
24.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
24.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
24.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
24.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
24.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
24.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
24.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
24.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
24.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
24.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
24.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
24.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
24.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
24.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
24.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
23.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
23.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
23.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
23.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
23.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
23.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
23.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
23.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
23.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
23.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
23.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
23.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
23.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
23.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
22.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
22.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
22.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
22.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
22.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
22.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
22.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
22.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
22.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
22.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
21.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
21.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
21.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
21.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
21.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
21.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
21.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
21.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
21.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
21.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
21.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
21.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
20.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
20.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
20.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
20.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
20.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
20.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
20.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
20.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
20.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
20.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
20.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
20.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
20.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
19.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
19.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
19.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
19.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
19.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
19.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
19.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
19.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
19.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
18.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
18.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
18.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
18.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
18.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
17.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
17.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
17.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
17.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
17.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
17.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
17.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
17.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
16.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
16.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
16.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
16.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
15.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
15.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
15.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
15.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
15.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
14.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
13.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
11.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
11.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
8.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRADC1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.6
Number of samples
231
Samples
Sample
Description
TPM
DO23511
0 years, female, NA, stage:3, dead, 180 days
95.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
79.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
70.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
68.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
67.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
67.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
59.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
55.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
53.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
52.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
50.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
50.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
50.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
49.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
49.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
48.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
45.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
45.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
44.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
44.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
38.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
37.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
36.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
36.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
36.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
36.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
34.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
34.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
33.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
33.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
33.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
33.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
32.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
32.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
31.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
31.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
31.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
31.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
30.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
30.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
30.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
29.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
29.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
29.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
29.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
29.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
29.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
29.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
29.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
28.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
28.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
28.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
28.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
28.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
27.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
27.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
27.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
27.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
27.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
26.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
26.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
26.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
26.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
26.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
25.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
25.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
25.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
25.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
24.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
24.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
24.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
24.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
24.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
24.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
24.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
23.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
23.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
23.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
23.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
23.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
23.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
22.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
22.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
22.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
22.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
22.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
22.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
22.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
22.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
22.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
22.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
22.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
21.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
21.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
21.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
21.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
21.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
21.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
21.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
20.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
20.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
20.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
20.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
20.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
20.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
20.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
20.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
20.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
20.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
20.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
19.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
19.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
19.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
19.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
19.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
19.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
19.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
19.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
19.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
19.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
18.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
18.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
18.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
18.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
18.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
18.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
18.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
18.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
17.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
17.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
17.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
16.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
16.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
16.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
16.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
16.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
16.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
16.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
16.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
15.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
15.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
15.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
15.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
15.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
15.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
15.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
15.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
15.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
14.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
14.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
14.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
14.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
14.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
14.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
13.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
13.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
13.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
13.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
13.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
11.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
11.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
11.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
11.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
11.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
10.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
9.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
9.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
9.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
9.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
8.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
8.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
8.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
6.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
5.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
4.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
517
Tumor
2.2
328
Normal
1.5
523
Tumor
0.8
756
Normal
0.8
514
Normal
0.8
364
Normal
0.7
416
Normal
0.7
746
Normal
0.6
258
Normal
0.6
516
Normal
0.6
411
Tumor
0.6
436
Normal
0.6
785
Tumor
0.6
814
Normal
0.5
665
Tumor
0.5
231
Tumor
0.5
518
Normal
0.5
568
Normal
0.5
132
Normal
0.5
574
Normal
0.4
257
Tumor
0.4
526
Normal
0.4
137
Tumor
0.4
272
Normal
0.4
524
Normal
0.4
664
Normal
0.4
356
Normal
0.4
1027
Tumor
0.4
648
Normal
0.4
142
Normal
0.4
722
Normal
0.4
685
Tumor
0.4
558
Normal
0.4
123
Tumor
0.4
431
Tumor
0.3
1031
Tumor
0.3
136
Normal
0.3
564
Normal
0.3
778
Normal
0.3
268
Normal
0.3
915
Tumor
0.3
786
Normal
0.3
918
Normal
0.3
924
Normal
0.3
647
Tumor
0.3
513
Tumor
0.3
267
Tumor
0.3
262
Normal
0.3
432
Normal
0.3
232
Normal
0.3
435
Tumor
0.3
923
Tumor
0.2
686
Normal
0.2
672
Normal
0.2
713
Tumor
0.2
138
Normal
0.2
261
Tumor
0.2
571
Tumor
0.2
666
Normal
0.2
813
Tumor
0.2
922
Normal
0.2
662
Normal
0.2
412
Normal
0.2
777
Tumor
0.2
433
Tumor
0.1
1025
Tumor
0.1
446
Normal
0.1
482
Normal
0.1
695
Tumor
0.1
573
Tumor
0.1
111
Normal
0.1
355
Tumor
0.1
126
Normal
0.1
444
Normal
0.1
572
Normal
0.1
327
Tumor
0.1
445
Tumor
0.1
926
Normal
0.0
128
Normal
0.0
145
Tumor
0.0
714
Normal
0.0
271
Tumor
0.0
415
Tumor
0.0
721
Tumor
0.0
125
Tumor
0.0
1021
Tumor
0.0
921
Tumor
0.0
462
Normal
0.0
481
Tumor
0.0
916
Normal
0.0
745
Tumor
-0.1
114
Normal
-0.1
661
Tumor
-0.1
146
Normal
-0.1
127
Tumor
-0.1
124
Normal
-0.1
131
Tumor
-0.1
141
Tumor
-0.1
472
Normal
-0.1
1026
Normal
-0.1
363
Tumor
-0.1
515
Tumor
-0.1
663
Tumor
-0.1
716
Normal
-0.1
563
Tumor
-0.1
1028
Normal
-0.1
1022
Normal
-0.2
1041
Tumor
-0.2
917
Tumor
-0.2
474
Normal
-0.2
671
Tumor
-0.2
434
Normal
-0.2
696
Normal
-0.2
1042
Normal
-0.2
1032
Normal
-0.3
755
Tumor
-0.3
478
Normal
-0.3
715
Tumor
-0.3
477
Tumor
-0.3
135
Tumor
-0.4
461
Tumor
-0.4
443
Tumor
-0.4
113
Tumor
-0.4
112
Tumor
-0.4
557
Tumor
-0.4
471
Tumor
-0.4
473
Tumor
-0.4
567
Tumor
-0.5
525
Tumor
-0.6
925
Tumor
-0.7
351
Tumor
N/A
352
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
483
Tumor
N/A
484
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
487
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
368
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
955
Tumor
N/A
956
Normal
N/A
957
Tumor
N/A
958
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
963
Tumor
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
635
Tumor
N/A
877
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
536
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
423
Tumor
N/A
424
Normal
N/A
545
Tumor
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
311
Tumor
N/A
553
Tumor
N/A
312
Normal
N/A
554
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
451
Tumor
N/A
331
Tumor
N/A
452
Normal
N/A
211
Tumor
N/A
332
Normal
N/A
212
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
