HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.3 nTPM
HPA Brain:24.7 nTPM
GTEx:14.3 nTPM
FANTOM5:20.8 Scaled Tags Per Million
Pig:29.5 nTPM
Mouse:11.4 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 24.7
Sample id Sample description nTPM
Hippocampus
nTPM: 22.0
2621 Female, age 67, right hemisphere 23.9
1855 Male, age 76, left hemisphere 23.1
1898 Male, age 80, left hemisphere 22.3
2529 Female, age 94, left hemisphere 21.7
1911 Female, age 85, right hemisphere 20.4
2148 Female, age 91, left hemisphere 20.4
Dentate gyrus
nTPM: 21.3
1927 Female, age 91, both hemispheres 24.8
2010 Male, age 76, both hemispheres 22.5
2246 Female, age 85, both hemispheres 22.5
2528 Male, age 74, both hemispheres 20.3
2531 Female, age 67, both hemispheres 19.3
2530 Female, age 94, left hemisphere 18.2
Entorhinal gyrus
nTPM: 23.1
2686 Male, age 75, right hemisphere 25.2
1787 Male, age 76, left hemisphere 24.0
1938 Female, age 85, left hemisphere 22.9
2764 Male, age 80, right hemisphere 22.8
2117 Female, age 91, right hemisphere 22.4
2613 Female, age 94, left hemisphere 21.3
Hippocampus, CA1
nTPM: 23.0
2045 Male, age 76, both hemispheres 28.5
2749 Male, age 80, left hemisphere 24.4
1873 Female, age 85, both hemispheres 22.6
2082 Female, age 91, right hemisphere 20.2
2527 Male, age 74, both hemispheres 19.4
Hippocampus, CA2
nTPM: 21.6
1892 Male, age 76, both hemispheres 23.6
1963 Male, age 80, left hemisphere 21.8
2249 Male, age 74, both hemispheres 21.5
2437 Female, age 94, left hemisphere 21.5
2113 Female, age 91, right hemisphere 20.7
1940 Female, age 85, left hemisphere 20.5
Hippocampus, CA3
nTPM: 21.9
2137 Male, age 80, left hemisphere 25.4
1867 Male, age 76, both hemispheres 24.4
1891 Female, age 85, both hemispheres 21.9
2861 Female, age 67, both hemispheres 20.7
2620 Female, age 94, left hemisphere 19.7
2436 Male, age 74, both hemispheres 19.5
Parahippocampal cortex
nTPM: 22.2
1850 Male, age 80, both hemispheres 24.5
1933 Female, age 85, both hemispheres 23.6
2693 Female, age 94, both hemispheres 22.6
2250 Female, age 67, right hemisphere 22.4
2622 Female, age 67, right hemisphere 22.1
2018 Male, age 76, both hemispheres 22.0
2692 Male, age 74, both hemispheres 22.0
2245 Female, age 91, both hemispheres 21.7
2532 Female, age 72, left hemisphere 21.6
1990 Female, age 91, right hemisphere 19.8
Perirhinal gyrus
nTPM: 24.7
1847 Female, age 91, left hemisphere 26.4
2848 Male, age 76, right hemisphere 25.8
1794 Male, age 80, right hemisphere 25.3
1841 Female, age 85, right hemisphere 23.1
2521 Female, age 94, right hemisphere 22.9
Subiculum
nTPM: 23.3
1977 Female, age 85, both hemispheres 26.0
2042 Male, age 76, both hemispheres 25.1
1901 Male, age 80, both hemispheres 23.1
2619 Male, age 74, both hemispheres 22.6
2438 Female, age 94, left hemisphere 22.2
2729 Female, age 91, right hemisphere 20.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.3
Samples: 197

Max nTPM: 21.5
Min nTPM: 9.7
Std nTPM: 2.0
Median nTPM: 14.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 21.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 21.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 19.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 19.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 19.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 18.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 17.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.8
FF:10153-102I9 76 years, female 23.0
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 29.5
Pig sample Sample description nTPM
Subiculum
nTPM: 26.1
Samples: 4

Max nTPM: 27.1
Min nTPM: 25.6
Sample A Female 27.1
Sample B Female 26.1
Sample C Male 25.7
Sample D Male 25.6
Dorsal hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 26.1
Min nTPM: 23.0
Sample A Female 25.3
Sample B Female 26.1
Sample C Male 23.0
Sample D Male 24.4
Entorhinal cortex
nTPM: 29.5
Samples: 4

Max nTPM: 30.5
Min nTPM: 28.4
Sample A Female 30.5
Sample B Female 29.6
Sample C Male 28.4
Sample D Male 29.5
Ventral hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 25.6
Min nTPM: 23.2
Sample A Female 24.0
Sample B Female 24.0
Sample C Male 23.2
Sample D Male 25.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 12.7
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 12.7
Sample C Female 10.1
Sample D Female 10.9
Hippocampal formation
nTPM: 11.4
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.3
Sample A Male 11.0
Sample B Male 10.3
Sample C Female 12.8
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
68410494 Antisense, RP_041214_02_A06, Mouse strain C57BL/6J (56 days, male) 7.2

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