We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NT5E is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
107.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
83.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
78.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
76.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
72.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
67.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
65.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
55.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
53.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
50.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
49.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
47.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
44.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
44.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
44.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
43.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
43.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
42.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
42.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
42.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
41.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
40.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
40.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
38.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
38.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
37.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
35.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
35.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
35.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
34.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
34.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
33.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
32.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
31.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
31.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
31.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
30.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
30.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
30.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
30.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
30.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
30.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
29.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
29.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
29.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
28.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
28.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
28.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
28.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
27.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
27.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
27.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
26.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
26.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
25.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
25.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
25.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
25.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
24.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
24.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
24.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
24.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
24.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
24.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
23.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
23.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
22.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
22.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
22.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
22.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
22.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
22.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
21.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
21.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
21.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
21.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
21.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
21.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
21.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
21.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
21.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
21.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
21.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
20.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
20.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
20.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
20.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
20.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
19.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
19.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
19.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
19.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
19.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
19.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
19.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
19.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
19.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
19.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
19.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
19.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
19.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
18.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
18.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
18.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
18.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
18.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
18.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
18.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
17.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
17.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
17.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
17.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
17.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
17.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
17.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
16.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
16.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
16.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
16.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
16.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
16.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
16.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
16.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
16.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
15.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
15.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
15.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
15.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
15.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
15.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
15.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
15.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
15.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
15.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
15.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
15.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
14.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
14.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
14.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
14.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
13.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
13.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
13.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
13.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
12.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
12.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
12.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
11.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
11.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
11.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
11.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
11.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
11.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
10.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
10.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
10.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
10.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
9.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
9.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
9.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
9.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
9.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
9.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
9.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
9.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
9.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
9.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
8.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
8.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
8.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
8.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
8.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
8.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
7.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
7.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
7.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
6.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
5.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
5.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
4.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
4.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
4.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
4.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
4.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
3.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
3.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
3.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
3.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
2.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
2.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
2.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
2.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
2.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
2.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NT5E is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.1
Number of samples
231
Samples
Sample
Description
TPM
DO50844
0 years, male, NA, stage:4, alive, 300 days
131.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
62.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
59.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
51.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
51.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
50.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
50.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
49.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
47.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
46.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
46.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
45.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
45.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
45.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
45.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
45.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
43.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
42.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
42.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
41.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
40.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
40.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
39.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
38.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
38.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
37.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
36.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
36.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
35.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
34.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
33.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
33.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
32.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
31.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
31.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
31.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
30.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
30.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
30.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
30.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
29.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
28.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
28.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
27.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
26.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
26.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
26.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
26.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
25.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
24.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
24.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
24.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
24.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
24.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
23.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
23.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
23.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
22.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
22.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
21.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
20.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
20.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
20.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
20.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
20.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
20.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
20.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
19.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
19.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
19.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
19.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
19.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
19.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
19.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
19.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
19.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
18.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
18.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
18.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
18.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
17.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
17.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
17.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
17.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
17.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
17.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
16.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
16.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
16.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
16.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
16.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
16.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
15.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
15.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
15.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
15.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
14.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
14.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
14.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
13.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
13.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
13.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
12.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
12.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
12.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
11.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
10.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
8.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
7.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
7.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
7.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
7.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
7.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
6.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
6.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
6.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
6.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
5.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
5.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
5.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
4.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
4.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
4.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
4.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
4.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
3.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
3.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
3.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
3.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
3.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
3.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
3.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
3.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
3.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
3.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
2.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
2.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
2.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
2.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
1.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
1.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
1.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
1.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
1.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
1.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
1.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
1.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
1.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
112
Tumor
1.8
425
Tumor
1.7
445
Tumor
1.4
413
Tumor
1.4
983
Tumor
1.4
497
Tumor
1.3
737
Tumor
1.3
975
Tumor
1.2
431
Tumor
1.2
977
Tumor
1.2
271
Tumor
1.1
1041
Tumor
1.1
135
Tumor
1.1
815
Tumor
1.0
285
Tumor
1.0
131
Tumor
1.0
471
Tumor
1.0
951
Tumor
0.8
387
Tumor
0.8
727
Tumor
0.7
1031
Tumor
0.7
1025
Tumor
0.7
463
Tumor
0.7
221
Tumor
0.7
367
Tumor
0.6
963
Tumor
0.6
553
Tumor
0.6
443
Tumor
0.6
813
Tumor
0.6
1021
Tumor
0.5
1043
Tumor
0.5
127
Tumor
0.5
778
Normal
0.4
721
Tumor
0.4
383
Tumor
0.4
661
Tumor
0.4
517
Tumor
0.4
883
Tumor
0.4
863
Tumor
0.4
663
Tumor
0.4
433
Tumor
0.4
477
Tumor
0.4
137
Tumor
0.3
967
Tumor
0.3
746
Normal
0.2
515
Tumor
0.2
554
Normal
0.2
1032
Normal
0.2
223
Tumor
0.2
878
Normal
0.2
455
Tumor
0.2
636
Normal
0.1
147
Tumor
0.1
921
Tumor
0.1
984
Normal
0.1
814
Normal
0.1
567
Tumor
0.1
435
Tumor
0.1
635
Tumor
0.1
1022
Normal
0.1
755
Tumor
0.1
536
Normal
0.1
421
Tumor
0.1
777
Tumor
0.1
818
Normal
0.1
686
Normal
0.1
952
Normal
0.1
1028
Normal
0.1
186
Normal
0.1
925
Tumor
0.1
415
Tumor
0.0
786
Normal
0.0
958
Normal
0.0
648
Normal
0.0
964
Normal
0.0
128
Normal
0.0
944
Normal
0.0
873
Tumor
0.0
185
Tumor
0.0
483
Tumor
0.0
968
Normal
0.0
376
Normal
0.0
738
Normal
0.0
851
Tumor
0.0
572
Normal
0.0
482
Normal
0.0
527
Tumor
0.0
756
Normal
0.0
351
Tumor
0.0
744
Normal
0.0
352
Normal
0.0
414
Normal
0.0
912
Normal
0.0
516
Normal
0.0
698
Normal
0.0
162
Normal
0.0
867
Tumor
0.0
526
Normal
0.0
866
Normal
0.0
368
Normal
0.0
487
Tumor
0.0
298
Normal
0.0
448
Normal
0.0
452
Normal
0.0
261
Tumor
0.0
363
Tumor
0.0
332
Normal
0.0
714
Normal
0.0
426
Normal
0.0
858
Normal
0.0
742
Normal
0.0
938
Normal
-0.1
926
Normal
-0.1
524
Normal
-0.1
924
Normal
-0.1
1016
Normal
-0.1
715
Tumor
-0.1
132
Normal
-0.1
1045
Tumor
-0.1
218
Normal
-0.1
142
Normal
-0.1
723
Tumor
-0.1
1042
Normal
-0.1
148
Normal
-0.1
882
Normal
-0.1
534
Normal
-0.1
954
Normal
-0.1
472
Normal
-0.1
868
Normal
-0.1
1044
Normal
-0.1
716
Normal
-0.1
278
Normal
-0.1
816
Normal
-0.1
1026
Normal
-0.1
982
Normal
-0.1
546
Normal
-0.1
1046
Normal
-0.1
286
Normal
-0.1
488
Normal
-0.1
528
Normal
-0.1
313
Tumor
-0.1
191
Tumor
-0.1
342
Normal
-0.1
172
Normal
-0.1
187
Tumor
-0.1
484
Normal
-0.1
436
Normal
-0.1
412
Normal
-0.1
314
Normal
-0.1
864
Normal
-0.1
356
Normal
-0.1
824
Normal
-0.1
617
Tumor
-0.1
126
Normal
-0.1
462
Normal
-0.1
124
Normal
-0.1
922
Normal
-0.1
728
Normal
-0.2
353
Tumor
-0.2
884
Normal
-0.2
136
Normal
-0.2
862
Normal
-0.2
518
Normal
-0.2
494
Normal
-0.2
284
Normal
-0.2
384
Normal
-0.2
558
Normal
-0.2
447
Tumor
-0.2
232
Normal
-0.2
272
Normal
-0.2
955
Tumor
-0.2
481
Tumor
-0.2
444
Normal
-0.2
1014
Normal
-0.2
354
Normal
-0.2
574
Normal
-0.2
474
Normal
-0.2
696
Normal
-0.2
523
Tumor
-0.2
823
Tumor
-0.2
432
Normal
-0.2
328
Normal
-0.2
722
Normal
-0.2
344
Normal
-0.2
874
Normal
-0.2
224
Normal
-0.2
563
Tumor
-0.2
358
Normal
-0.2
212
Normal
-0.2
312
Normal
-0.2
535
Tumor
-0.2
628
Normal
-0.2
446
Normal
-0.2
666
Normal
-0.2
466
Normal
-0.2
114
Normal
-0.2
392
Normal
-0.2
492
Normal
-0.2
568
Normal
-0.2
228
Normal
-0.2
277
Tumor
-0.2
918
Normal
-0.2
514
Normal
-0.2
966
Normal
-0.2
664
Normal
-0.2
616
Normal
-0.3
111
Normal
-0.3
538
Normal
-0.3
493
Tumor
-0.3
913
Tumor
-0.3
394
Normal
-0.3
396
Normal
-0.3
424
Normal
-0.3
258
Normal
-0.3
861
Tumor
-0.3
976
Normal
-0.3
724
Normal
-0.3
341
Tumor
-0.3
662
Normal
-0.3
937
Tumor
-0.3
745
Tumor
-0.3
817
Tumor
-0.3
268
Normal
-0.3
461
Tumor
-0.3
956
Normal
-0.3
478
Normal
-0.3
428
Normal
-0.3
196
Normal
-0.3
422
Normal
-0.3
138
Normal
-0.3
978
Normal
-0.3
498
Normal
-0.3
331
Tumor
-0.3
468
Normal
-0.3
852
Normal
-0.3
364
Normal
-0.3
877
Tumor
-0.3
642
Normal
-0.3
881
Tumor
-0.3
857
Tumor
-0.3
416
Normal
-0.3
672
Normal
-0.4
695
Tumor
-0.4
641
Tumor
-0.4
188
Normal
-0.4
456
Normal
-0.4
434
Normal
-0.4
564
Normal
-0.4
297
Tumor
-0.4
362
Normal
-0.4
627
Tumor
-0.4
262
Normal
-0.4
222
Normal
-0.4
146
Normal
-0.4
464
Normal
-0.4
923
Tumor
-0.4
113
Tumor
-0.4
214
Normal
-0.4
914
Normal
-0.4
217
Tumor
-0.4
916
Normal
-0.4
343
Tumor
-0.4
915
Tumor
-0.5
192
Normal
-0.5
467
Tumor
-0.5
618
Normal
-0.5
366
Normal
-0.5
391
Tumor
-0.5
388
Normal
-0.5
911
Tumor
-0.5
145
Tumor
-0.5
386
Normal
-0.5
473
Tumor
-0.5
327
Tumor
-0.5
513
Tumor
-0.5
267
Tumor
-0.5
227
Tumor
-0.6
355
Tumor
-0.6
311
Tumor
-0.6
665
Tumor
-0.6
525
Tumor
-0.6
141
Tumor
-0.6
423
Tumor
-0.6
213
Tumor
-0.7
865
Tumor
-0.7
615
Tumor
-0.7
427
Tumor
-0.7
161
Tumor
-0.7
785
Tumor
-0.7
545
Tumor
-0.8
743
Tumor
-0.8
981
Tumor
-0.8
123
Tumor
-0.8
395
Tumor
-0.8
1015
Tumor
-0.8
697
Tumor
-0.8
713
Tumor
-0.8
943
Tumor
-0.8
195
Tumor
-0.8
361
Tumor
-0.8
965
Tumor
-0.9
557
Tumor
-0.9
125
Tumor
-0.9
533
Tumor
-0.9
917
Tumor
-0.9
171
Tumor
-1.0
1027
Tumor
-1.0
671
Tumor
-1.0
231
Tumor
-1.0
365
Tumor
-1.0
647
Tumor
-1.0
357
Tumor
-1.0
283
Tumor
-1.1
451
Tumor
-1.1
491
Tumor
-1.1
375
Tumor
-1.1
571
Tumor
-1.2
741
Tumor
-1.2
537
Tumor
-1.3
685
Tumor
-1.3
573
Tumor
-1.3
465
Tumor
-1.3
953
Tumor
-1.4
257
Tumor
-1.4
393
Tumor
-1.4
957
Tumor
-1.4
211
Tumor
-1.5
411
Tumor
-1.6
1013
Tumor
-1.7
385
Tumor
-1.8
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
