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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
P2RX4 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
76.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
75.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
58.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
53.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
48.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
45.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
45.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
45.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
44.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
42.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
42.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
42.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
42.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
40.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
39.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
39.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
39.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
38.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
37.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
37.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
36.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
36.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
36.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
35.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
35.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
34.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
34.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
34.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
33.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
33.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
32.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
32.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
31.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
31.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
31.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
30.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
30.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
30.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
29.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
29.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
29.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
28.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
28.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
27.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
27.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
26.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
26.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
26.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
26.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
26.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
26.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
25.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
25.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
25.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
25.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
24.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
24.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
23.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
23.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
23.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
23.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
23.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
23.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
23.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
23.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
22.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
22.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
22.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
22.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
22.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
21.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
21.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
21.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
21.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
21.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
20.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
20.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
20.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
20.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
20.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
20.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
20.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
19.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
19.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
19.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
19.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
19.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
18.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
18.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
18.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
18.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
18.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
17.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
17.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
17.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
17.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
17.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
17.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
17.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
17.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
16.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
16.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
16.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
16.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
16.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
16.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
16.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
16.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
16.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
15.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
15.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
15.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
15.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
15.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
15.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
15.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
15.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
15.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
15.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
15.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
15.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
14.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
14.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
14.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
14.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
14.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
14.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
14.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
14.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
14.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
14.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
14.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
13.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
13.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
13.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
13.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
13.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
13.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
13.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
12.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
12.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
12.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
12.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
12.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
12.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
11.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
10.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
10.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
9.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
9.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
9.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
8.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
8.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
8.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
8.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
8.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
7.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
6.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
6.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
5.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
5.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
5.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
5.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
4.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
3.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
3.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
3.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
3.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
2.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
2.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
2.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
P2RX4 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
231
Samples
Sample
Description
TPM
DO45275
0 years, male, NA, stage:3, dead, 10 days
53.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
51.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
50.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
43.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
40.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
37.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
37.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
36.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
32.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
31.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
30.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
30.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
29.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
29.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
29.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
28.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
28.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
27.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
27.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
26.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
26.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
25.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
25.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
25.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
24.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
23.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
23.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
23.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
23.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
23.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
22.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
22.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
22.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
22.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
22.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
22.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
21.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
21.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
21.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
21.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
21.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
21.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
21.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
20.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
20.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
19.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
19.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
18.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
18.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
18.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
18.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
18.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
18.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
17.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
17.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
17.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
17.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
17.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
17.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
17.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
16.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
16.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
16.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
16.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
16.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
16.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
15.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
15.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
15.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
15.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
15.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
15.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
14.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
14.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
14.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
14.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
14.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
14.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
14.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
13.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
13.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
13.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
13.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
13.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
12.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
12.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
12.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
12.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
12.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
11.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
11.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
11.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
11.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
11.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
11.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
11.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
11.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
11.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
10.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
10.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
10.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
10.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
9.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
9.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
8.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
6.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
5.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
5.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
4.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
4.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
3.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
1.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
125
Tumor
1.6
545
Tumor
1.3
471
Tumor
1.3
385
Tumor
1.3
425
Tumor
1.3
413
Tumor
1.2
285
Tumor
1.1
131
Tumor
1.1
817
Tumor
1.0
395
Tumor
1.0
921
Tumor
0.9
951
Tumor
0.9
975
Tumor
0.9
983
Tumor
0.9
497
Tumor
0.9
147
Tumor
0.9
493
Tumor
0.9
525
Tumor
0.9
221
Tumor
0.8
343
Tumor
0.8
387
Tumor
0.8
271
Tumor
0.6
553
Tumor
0.6
967
Tumor
0.6
421
Tumor
0.5
533
Tumor
0.4
925
Tumor
0.4
492
Normal
0.4
483
Tumor
0.4
283
Tumor
0.4
743
Tumor
0.4
952
Normal
0.4
515
Tumor
0.4
554
Normal
0.3
641
Tumor
0.3
517
Tumor
0.3
124
Normal
0.3
223
Tumor
0.3
491
Tumor
0.3
943
Tumor
0.3
1025
Tumor
0.3
671
Tumor
0.3
617
Tumor
0.3
715
Tumor
0.2
1031
Tumor
0.2
965
Tumor
0.2
535
Tumor
0.2
524
Normal
0.2
538
Normal
0.1
957
Tumor
0.1
953
Tumor
0.1
363
Tumor
0.1
573
Tumor
0.1
923
Tumor
0.1
713
Tumor
0.1
955
Tumor
0.1
851
Tumor
0.1
877
Tumor
0.1
661
Tumor
0.1
881
Tumor
0.1
537
Tumor
0.1
528
Normal
0.1
494
Normal
0.1
142
Normal
0.0
443
Tumor
0.0
477
Tumor
0.0
463
Tumor
0.0
145
Tumor
0.0
498
Normal
0.0
557
Tumor
0.0
516
Normal
0.0
883
Tumor
0.0
415
Tumor
0.0
461
Tumor
0.0
331
Tumor
-0.1
478
Normal
-0.1
355
Tumor
-0.1
135
Tumor
-0.1
488
Normal
-0.1
815
Tumor
-0.1
1028
Normal
-0.1
257
Tumor
-0.1
956
Normal
-0.1
636
Normal
-0.1
546
Normal
-0.1
526
Normal
-0.1
171
Tumor
-0.1
356
Normal
-0.1
878
Normal
-0.1
744
Normal
-0.1
364
Normal
-0.1
864
Normal
-0.1
968
Normal
-0.1
434
Normal
-0.1
823
Tumor
-0.1
746
Normal
-0.1
1014
Normal
-0.2
111
Normal
-0.2
455
Tumor
-0.2
185
Tumor
-0.2
984
Normal
-0.2
966
Normal
-0.2
344
Normal
-0.2
534
Normal
-0.2
487
Tumor
-0.2
1045
Tumor
-0.2
112
Tumor
-0.2
778
Normal
-0.2
213
Tumor
-0.2
514
Normal
-0.2
211
Tumor
-0.2
663
Tumor
-0.2
937
Tumor
-0.2
447
Tumor
-0.2
313
Tumor
-0.2
328
Normal
-0.2
918
Normal
-0.2
536
Normal
-0.2
696
Normal
-0.2
277
Tumor
-0.2
341
Tumor
-0.2
737
Tumor
-0.2
728
Normal
-0.2
412
Normal
-0.2
523
Tumor
-0.2
195
Tumor
-0.2
868
Normal
-0.2
1021
Tumor
-0.3
484
Normal
-0.3
146
Normal
-0.3
857
Tumor
-0.3
1046
Normal
-0.3
1042
Normal
-0.3
474
Normal
-0.3
616
Normal
-0.3
416
Normal
-0.3
472
Normal
-0.3
944
Normal
-0.3
563
Tumor
-0.3
913
Tumor
-0.3
882
Normal
-0.3
914
Normal
-0.3
977
Tumor
-0.3
473
Tumor
-0.3
272
Normal
-0.3
963
Tumor
-0.3
231
Tumor
-0.3
816
Normal
-0.3
685
Tumor
-0.3
362
Normal
-0.3
917
Tumor
-0.3
697
Tumor
-0.3
912
Normal
-0.3
393
Tumor
-0.3
1015
Tumor
-0.3
428
Normal
-0.3
976
Normal
-0.3
123
Tumor
-0.3
422
Normal
-0.3
618
Normal
-0.3
391
Tumor
-0.3
814
Normal
-0.3
866
Normal
-0.4
432
Normal
-0.4
114
Normal
-0.4
722
Normal
-0.4
686
Normal
-0.4
375
Tumor
-0.4
161
Tumor
-0.4
424
Normal
-0.4
132
Normal
-0.4
367
Tumor
-0.4
365
Tumor
-0.4
444
Normal
-0.4
297
Tumor
-0.4
414
Normal
-0.4
267
Tumor
-0.4
138
Normal
-0.4
433
Tumor
-0.4
738
Normal
-0.4
884
Normal
-0.4
922
Normal
-0.4
187
Tumor
-0.4
136
Normal
-0.4
874
Normal
-0.4
128
Normal
-0.4
141
Tumor
-0.4
1032
Normal
-0.4
268
Normal
-0.4
916
Normal
-0.4
745
Tumor
-0.4
862
Normal
-0.4
756
Normal
-0.4
924
Normal
-0.4
467
Tumor
-0.4
126
Normal
-0.4
427
Tumor
-0.4
1013
Tumor
-0.4
1022
Normal
-0.4
813
Tumor
-0.4
926
Normal
-0.4
642
Normal
-0.4
172
Normal
-0.4
186
Normal
-0.4
964
Normal
-0.4
716
Normal
-0.4
314
Normal
-0.5
462
Normal
-0.5
1026
Normal
-0.5
567
Tumor
-0.5
698
Normal
-0.5
527
Tumor
-0.5
448
Normal
-0.5
162
Normal
-0.5
721
Tumor
-0.5
481
Tumor
-0.5
436
Normal
-0.5
446
Normal
-0.5
982
Normal
-0.5
192
Normal
-0.5
714
Normal
-0.5
137
Tumor
-0.5
628
Normal
-0.5
342
Normal
-0.5
635
Tumor
-0.5
954
Normal
-0.5
518
Normal
-0.5
662
Normal
-0.5
426
Normal
-0.5
298
Normal
-0.5
188
Normal
-0.5
127
Tumor
-0.5
742
Normal
-0.5
482
Normal
-0.5
786
Normal
-0.5
218
Normal
-0.5
1043
Tumor
-0.5
383
Tumor
-0.6
278
Normal
-0.6
435
Tumor
-0.6
312
Normal
-0.6
865
Tumor
-0.6
423
Tumor
-0.6
222
Normal
-0.6
384
Normal
-0.6
824
Normal
-0.6
212
Normal
-0.6
227
Tumor
-0.6
262
Normal
-0.6
852
Normal
-0.6
466
Normal
-0.6
456
Normal
-0.6
232
Normal
-0.6
376
Normal
-0.6
327
Tumor
-0.6
361
Tumor
-0.6
513
Tumor
-0.6
368
Normal
-0.6
873
Tumor
-0.6
286
Normal
-0.6
394
Normal
-0.6
938
Normal
-0.6
214
Normal
-0.6
217
Tumor
-0.6
311
Tumor
-0.6
445
Tumor
-0.6
191
Tumor
-0.6
647
Tumor
-0.6
351
Tumor
-0.6
148
Normal
-0.6
867
Tumor
-0.6
258
Normal
-0.6
224
Normal
-0.6
464
Normal
-0.7
352
Normal
-0.7
818
Normal
-0.7
228
Normal
-0.7
1044
Normal
-0.7
723
Tumor
-0.7
672
Normal
-0.7
354
Normal
-0.7
858
Normal
-0.7
615
Tumor
-0.7
411
Tumor
-0.7
727
Tumor
-0.7
392
Normal
-0.7
451
Tumor
-0.7
196
Normal
-0.7
332
Normal
-0.7
785
Tumor
-0.7
386
Normal
-0.7
468
Normal
-0.8
863
Tumor
-0.8
1016
Normal
-0.8
978
Normal
-0.8
452
Normal
-0.8
366
Normal
-0.8
357
Tumor
-0.8
574
Normal
-0.8
358
Normal
-0.8
695
Tumor
-0.8
861
Tumor
-0.8
958
Normal
-0.8
568
Normal
-0.8
1027
Tumor
-0.8
261
Tumor
-0.8
572
Normal
-0.8
915
Tumor
-0.8
666
Normal
-0.8
284
Normal
-0.8
396
Normal
-0.9
981
Tumor
-0.9
558
Normal
-0.9
664
Normal
-0.9
431
Tumor
-0.9
724
Normal
-0.9
627
Tumor
-0.9
755
Tumor
-0.9
388
Normal
-0.9
648
Normal
-0.9
113
Tumor
-0.9
564
Normal
-1.0
353
Tumor
-1.0
571
Tumor
-1.0
911
Tumor
-1.1
465
Tumor
-1.1
777
Tumor
-1.1
1041
Tumor
-1.1
665
Tumor
-1.2
741
Tumor
-1.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
