HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:7.8 nTPM
HPA Brain:38.1 nTPM
GTEx:7.8 nTPM
FANTOM5:25.5 Scaled Tags Per Million
Pig:29.7 nTPM
Mouse:43.0 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064161
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.6
2148 Female, age 91, left hemisphere 38.5
2621 Female, age 67, right hemisphere 35.2
1898 Male, age 80, left hemisphere 33.8
1855 Male, age 76, left hemisphere 33.2
2529 Female, age 94, left hemisphere 31.1
1911 Female, age 85, right hemisphere 29.8
Dentate gyrus
nTPM: 35.5
1927 Female, age 91, both hemispheres 41.2
2531 Female, age 67, both hemispheres 38.1
2530 Female, age 94, left hemisphere 37.4
2010 Male, age 76, both hemispheres 32.9
2528 Male, age 74, both hemispheres 32.1
2246 Female, age 85, both hemispheres 31.5
Entorhinal gyrus
nTPM: 33.4
2613 Female, age 94, left hemisphere 41.1
2764 Male, age 80, right hemisphere 36.5
1938 Female, age 85, left hemisphere 32.7
2686 Male, age 75, right hemisphere 32.2
1787 Male, age 76, left hemisphere 31.1
2117 Female, age 91, right hemisphere 26.6
Hippocampus, CA1
nTPM: 35.8
2749 Male, age 80, left hemisphere 49.4
1873 Female, age 85, both hemispheres 36.4
2045 Male, age 76, both hemispheres 32.7
2527 Male, age 74, both hemispheres 32.2
2082 Female, age 91, right hemisphere 28.3
Hippocampus, CA2
nTPM: 34.1
1892 Male, age 76, both hemispheres 43.7
1963 Male, age 80, left hemisphere 41.4
2437 Female, age 94, left hemisphere 34.7
2113 Female, age 91, right hemisphere 29.8
2249 Male, age 74, both hemispheres 29.6
1940 Female, age 85, left hemisphere 25.6
Hippocampus, CA3
nTPM: 38.1
2620 Female, age 94, left hemisphere 46.9
2137 Male, age 80, left hemisphere 43.0
2861 Female, age 67, both hemispheres 41.1
1867 Male, age 76, both hemispheres 37.2
2436 Male, age 74, both hemispheres 31.6
1891 Female, age 85, both hemispheres 28.9
Parahippocampal cortex
nTPM: 33.7
2622 Female, age 67, right hemisphere 36.4
2693 Female, age 94, both hemispheres 36.2
2245 Female, age 91, both hemispheres 35.9
2532 Female, age 72, left hemisphere 35.0
1850 Male, age 80, both hemispheres 33.8
2250 Female, age 67, right hemisphere 33.6
2692 Male, age 74, both hemispheres 33.3
1933 Female, age 85, both hemispheres 32.9
1990 Female, age 91, right hemisphere 32.6
2018 Male, age 76, both hemispheres 27.5
Perirhinal gyrus
nTPM: 34.7
1847 Female, age 91, left hemisphere 38.6
2521 Female, age 94, right hemisphere 35.4
1794 Male, age 80, right hemisphere 35.2
2848 Male, age 76, right hemisphere 32.3
1841 Female, age 85, right hemisphere 32.1
Subiculum
nTPM: 30.9
2438 Female, age 94, left hemisphere 34.8
1977 Female, age 85, both hemispheres 32.0
1901 Male, age 80, both hemispheres 31.9
2619 Male, age 74, both hemispheres 31.3
2729 Female, age 91, right hemisphere 29.7
2042 Male, age 76, both hemispheres 25.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.8
Samples: 197

Max nTPM: 16.4
Min nTPM: 1.2
Std nTPM: 3.2
Median nTPM: 7.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 16.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 16.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 16.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 15.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 15.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 15.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 15.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 15.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 14.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 13.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 13.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 25.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.5
FF:10169-103B7 60 years, female 34.2
FF:10153-102I9 76 years, female 16.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 29.7
Pig sample Sample description nTPM
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 34.4
Min nTPM: 25.3
Sample A Female 34.4
Sample B Female 27.0
Sample C Male 32.2
Sample D Male 25.3
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 29.0
Min nTPM: 19.5
Sample A Female 28.8
Sample B Female 25.4
Sample C Male 29.0
Sample D Male 19.5
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 27.2
Min nTPM: 23.4
Sample A Female 25.0
Sample B Female 23.4
Sample C Male 27.2
Sample D Male 23.5
Ventral hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 32.8
Min nTPM: 20.1
Sample A Female 25.1
Sample B Female 20.1
Sample C Male 32.8
Sample D Male 24.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 43.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 53.1
Min nTPM: 39.1
Sample A Male 39.5
Sample B Male 39.1
Sample C Female 40.4
Sample D Female 53.1
Hippocampal formation
nTPM: 37.0
Samples: 4

Max nTPM: 42.0
Min nTPM: 32.9
Sample A Male 37.7
Sample B Male 35.3
Sample C Female 42.0
Sample D Female 32.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68918964 Antisense, RP_050301_02_C07, Mouse strain C57BL/6J (56 days, male) 1.1

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