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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HAVCR2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
26.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
13.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
12.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
6.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
5.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
4.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
2.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HAVCR2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
475.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
452.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
330.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
312.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
312.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
275.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
261.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
246.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
228.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
223.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
204.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
198.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
188.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
184.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
181.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
172.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
172.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
170.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
170.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
159.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
156.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
150.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
144.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
144.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
138.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
135.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
133.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
133.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
131.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
131.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
130.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
128.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
128.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
128.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
124.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
123.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
122.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
122.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
119.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
116.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
116.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
116.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
116.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
114.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
112.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
112.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
109.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
108.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
106.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
106.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
105.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
105.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
104.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
104.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
103.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
103.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
102.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
102.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
101.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
101.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
101.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
100.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
100.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
100.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
99.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
99.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
98.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
97.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
96.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
95.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
95.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
94.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
94.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
93.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
91.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
91.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
90.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
90.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
90.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
90.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
90.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
89.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
89.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
88.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
88.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
87.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
87.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
86.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
86.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
86.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
85.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
84.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
84.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
83.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
83.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
83.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
83.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
82.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
81.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
81.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
81.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
81.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
80.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
80.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
80.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
79.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
78.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
78.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
78.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
78.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
77.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
76.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
76.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
75.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
75.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
74.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
73.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
73.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
73.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
73.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
72.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
72.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
70.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
69.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
69.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
69.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
68.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
67.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
66.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
66.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
66.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
66.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
65.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
65.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
65.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
65.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
65.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
64.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
63.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
63.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
62.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
62.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
62.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
62.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
61.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
61.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
61.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
60.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
59.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
59.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
59.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
59.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
59.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
59.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
58.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
58.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
58.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
58.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
57.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
57.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
57.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
57.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
56.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
55.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
53.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
53.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
53.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
52.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
52.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
52.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
52.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
51.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
51.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
51.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
51.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
51.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
51.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
50.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
50.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
50.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
50.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
50.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
50.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
50.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
49.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
49.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
49.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
49.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
49.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
48.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
48.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
48.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
48.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
48.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
48.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
47.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
47.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
47.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
47.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
47.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
47.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
47.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
46.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
46.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
46.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
46.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
46.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
46.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
46.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
45.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
44.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
44.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
44.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
44.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
43.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
43.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
43.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
43.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
42.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
42.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
41.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
41.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
41.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
41.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
40.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
40.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
40.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
40.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
40.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
40.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
40.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
39.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
39.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
39.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
38.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
38.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
38.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
38.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
38.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
38.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
37.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
37.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
36.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
36.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
36.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
36.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
36.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
36.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
36.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
36.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
35.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
35.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
35.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
35.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
35.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
35.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
34.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
34.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
34.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
34.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
34.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
34.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
34.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
34.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
34.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
33.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
33.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
32.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
32.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
32.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
32.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
32.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
31.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
31.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
30.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
30.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
30.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
30.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
30.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
29.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
29.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
29.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
28.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
28.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
28.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
28.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
28.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
27.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
27.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
27.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
27.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
27.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
27.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
26.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
26.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
26.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
25.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
25.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
25.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
24.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
24.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
24.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
23.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
23.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
22.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
22.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
22.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
21.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
21.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
18.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
17.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
15.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
15.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
15.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
13.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
12.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
11.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
11.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
9.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
8.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
7.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
7.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
7.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
6.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
6.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
6.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
5.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
4.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
4.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
4.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
4.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
3.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
3.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
3.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
2.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
2.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HAVCR2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
410.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
332.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
267.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
219.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
207.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
204.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
188.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
183.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
182.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
163.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
156.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
145.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
135.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
134.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
134.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
127.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
121.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
117.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
116.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
111.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
111.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
109.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
107.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
107.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
105.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
105.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
104.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
104.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
97.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
96.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
95.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
94.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
93.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
93.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
91.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
90.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
86.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
84.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
80.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
80.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
77.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
69.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
67.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
65.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
64.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
61.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
60.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
58.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
56.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
55.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
52.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
52.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
51.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
51.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
51.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
47.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
47.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
45.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
43.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
43.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
42.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
41.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
40.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
40.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
40.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
37.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
35.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
34.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
30.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
28.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
27.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
26.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
21.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
7.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HAVCR2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
233.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
194.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
187.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
184.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
172.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
162.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
157.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
148.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
126.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
125.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
118.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
115.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
113.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
112.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
106.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
103.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
103.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
101.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
100.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
95.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
94.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
91.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
90.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
89.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
88.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
88.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
83.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
80.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
79.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
77.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
77.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
76.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
76.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
75.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
75.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
72.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
70.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
69.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
67.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
67.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
66.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
65.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
62.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
61.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
60.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
60.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
59.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
59.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
58.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
58.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
58.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
58.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
58.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
57.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
57.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
57.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
56.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
55.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
53.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
52.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
52.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
52.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
52.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
52.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
51.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
51.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
50.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
50.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
49.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
49.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
48.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
48.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
48.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
47.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
46.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
46.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
46.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
46.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
45.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
45.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
45.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
44.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
43.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
41.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
41.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
40.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
40.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
40.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
39.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
39.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
38.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
38.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
38.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
38.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
37.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
37.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
36.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
36.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
35.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
35.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
35.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
35.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
35.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
34.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
33.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
33.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
33.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
32.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
31.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
31.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
30.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
30.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
29.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
29.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
28.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
28.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
28.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
27.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
27.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
27.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
26.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
24.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
24.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
23.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
23.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
22.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
21.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
19.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
18.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
13.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
12.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
12.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
11.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
10.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
10.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
10.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
10.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
10.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
8.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
8.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
8.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
6.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
6.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
6.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
6.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
6.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
5.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
5.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
4.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
4.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
4.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
4.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
4.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
3.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
3.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
3.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
2.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
2.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
2.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
2.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.3
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0007320003
Tumor
2.3
CPT0025050003
Tumor
2.1
CPT0015810003
Tumor
1.9
CPT0079410003
Tumor
1.9
CPT0000640003
Tumor
1.6
CPT0012670003
Tumor
1.5
CPT0088550004
Tumor
1.4
CPT0088760003
Tumor
1.4
CPT0069000003
Tumor
1.4
CPT0088480003
Tumor
1.3
CPT0025350003
Tumor
1.2
CPT0086360003
Tumor
1.2
CPT0089020003
Tumor
1.2
CPT0085670003
Tumor
1.1
CPT0079270003
Tumor
1.1
CPT0065930003
Tumor
1.1
CPT0009060003
Tumor
1.1
CPT0025880003
Tumor
1.0
CPT0077310003
Tumor
1.0
CPT0010160003
Tumor
1.0
CPT0002270011
Tumor
1.0
CPT0026410003
Tumor
1.0
CPT0065750003
Tumor
0.9
CPT0079380003
Tumor
0.9
CPT0078990003
Tumor
0.9
CPT0001500009
Tumor
0.9
CPT0087040003
Tumor
0.9
CPT0086820003
Tumor
0.9
CPT0012280003
Tumor
0.9
CPT0092790003
Tumor
0.8
CPT0079230003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0019130003
Tumor
0.7
CPT0092160003
Tumor
0.7
CPT0001260009
Tumor
0.6
CPT0063320003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0086030003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0006440003
Tumor
0.5
CPT0015910003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0001190001
Normal
0.3
CPT0025230003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0078800003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0014450004
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0075130003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0000780007
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0081990003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0078830003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0084590001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0089460004
Tumor
-0.3
CPT0066520001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0078510003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0017410003
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0001550001
Normal
-0.5
CPT0076350001
Normal
-0.5
CPT0001340003
Tumor
-0.5
CPT0079430001
Normal
-0.5
CPT0065690003
Tumor
-0.5
CPT0087050003
Normal
-0.5
CPT0001180009
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0078530001
Normal
-0.5
CPT0025170003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0001540009
Tumor
-0.6
CPT0088570001
Normal
-0.6
CPT0081600003
Tumor
-0.6
CPT0086970003
Normal
-0.6
CPT0077320001
Normal
-0.6
CPT0002350011
Tumor
-0.6
CPT0007470001
Normal
-0.6
CPT0014470001
Normal
-0.6
CPT0012290003
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0088920001
Normal
-0.7
CPT0088900003
Tumor
-0.7
CPT0017850003
Tumor
-0.7
CPT0023360001
Normal
-0.7
CPT0092740003
Normal
-0.7
CPT0076330003
Tumor
-0.7
CPT0086950003
Tumor
-0.7
CPT0089040001
Normal
-0.7
CPT0092800003
Normal
-0.7
CPT0086830003
Normal
-0.7
CPT0020130001
Normal
-0.8
CPT0069010001
Normal
-0.8
CPT0065820001
Normal
-0.8
CPT0006630003
Tumor
-0.8
CPT0011410003
Tumor
-0.8
CPT0075170001
Normal
-0.9
CPT0071150004
Tumor
-0.9
CPT0018250001
Normal
-0.9
CPT0000660001
Normal
-0.9
CPT0086370003
Normal
-0.9
CPT0092310003
Normal
-0.9
CPT0088630003
Tumor
-1.0
CPT0000890001
Normal
-1.0
CPT0001510001
Normal
-1.0
CPT0014370004
Tumor
-1.1
CPT0014130001
Normal
-1.1
CPT0001220008
Tumor
-1.1
CPT0063640001
Normal
-1.1
CPT0088710001
Normal
-1.1
CPT0010170001
Normal
-1.1
CPT0011240003
Tumor
-1.1
CPT0006530001
Normal
-1.1
CPT0010120001
Normal
-1.1
CPT0064400001
Normal
-1.1
CPT0078840001
Normal
-1.1
CPT0012090003
Normal
-1.2
CPT0014350001
Normal
-1.2
CPT0086870003
Tumor
-1.2
CPT0077110003
Tumor
-1.2
CPT0089480003
Normal
-1.2
CPT0009000003
Tumor
-1.3
CPT0024670003
Tumor
-1.3
CPT0012370003
Tumor
-1.3
CPT0077490003
Tumor
-1.3
CPT0006950001
Normal
-1.3
CPT0078660003
Tumor
-1.4
CPT0079000001
Normal
-1.4
CPT0066430001
Normal
-1.4
CPT0069160003
Tumor
-1.4
CPT0026420001
Normal
-1.4
CPT0077140001
Normal
-1.5
CPT0019160001
Normal
-1.5
CPT0012570003
Normal
-1.5
CPT0088690003
Tumor
-1.5
CPT0075570001
Normal
-1.5
CPT0088640003
Normal
-1.6
CPT0088500001
Normal
-1.6
CPT0078670001
Normal
-1.6
CPT0079300001
Normal
-1.6
CPT0086890003
Normal
-1.6
CPT0063330001
Normal
-1.6
CPT0078940001
Normal
-1.7
CPT0023710001
Normal
-1.7
CPT0020020001
Normal
-1.7
CPT0012920003
Normal
-1.7
CPT0007860003
Tumor
-1.8
CPT0088780001
Normal
-1.8
CPT0025610001
Normal
-1.8
CPT0081620001
Normal
-1.9
CPT0012640003
Normal
-1.9
CPT0013790003
Normal
-1.9
CPT0077500001
Normal
-2.0
CPT0082010001
Normal
-2.1
CPT0079510001
Normal
-2.2
CPT0002370001
Normal
-2.2
CPT0001230001
Normal
-2.3
CPT0009020003
Normal
-2.3
CPT0007870001
Normal
-2.4
CPT0009080003
Normal
-2.6
CPT0012900004
Tumor
-3.2
CPT0079180003
Tumor
-3.3
CPT0012770003
Normal
-3.4
CPT0024680001
Normal
-3.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
