HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:44.7 nTPM
HPA Brain:20.4 nTPM
GTEx:44.7 nTPM
FANTOM5:35.4 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:5.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011271Antibody HPA011272Antibody CAB013023Antibody CAB035987Antibody CAB058693Antibody CAB080415
Glial cells Not detectedNot detectedNot detectedNot detectedNot detectedMedium
Neuronal cells Not detectedNot detectedMediumNot detectedNot detectedMedium













HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.4
Sample id Sample description nTPM
Hippocampus
nTPM: 12.7
1898 Male, age 80, left hemisphere 15.4
2529 Female, age 94, left hemisphere 14.3
1855 Male, age 76, left hemisphere 14.1
2621 Female, age 67, right hemisphere 13.6
1911 Female, age 85, right hemisphere 12.7
2148 Female, age 91, left hemisphere 6.4
Dentate gyrus
nTPM: 15.7
2010 Male, age 76, both hemispheres 34.9
2528 Male, age 74, both hemispheres 17.1
2530 Female, age 94, left hemisphere 11.8
2531 Female, age 67, both hemispheres 11.7
2246 Female, age 85, both hemispheres 11.1
1927 Female, age 91, both hemispheres 7.3
Entorhinal gyrus
nTPM: 6.3
2117 Female, age 91, right hemisphere 12.9
1787 Male, age 76, left hemisphere 8.6
2686 Male, age 75, right hemisphere 5.3
1938 Female, age 85, left hemisphere 4.9
2613 Female, age 94, left hemisphere 3.1
2764 Male, age 80, right hemisphere 3.1
Hippocampus, CA1
nTPM: 12.2
2082 Female, age 91, right hemisphere 24.9
2045 Male, age 76, both hemispheres 13.0
1873 Female, age 85, both hemispheres 12.4
2527 Male, age 74, both hemispheres 7.5
2749 Male, age 80, left hemisphere 3.1
Hippocampus, CA2
nTPM: 20.4
2249 Male, age 74, both hemispheres 43.7
1940 Female, age 85, left hemisphere 30.8
2113 Female, age 91, right hemisphere 16.4
2437 Female, age 94, left hemisphere 12.1
1892 Male, age 76, both hemispheres 11.7
1963 Male, age 80, left hemisphere 8.0
Hippocampus, CA3
nTPM: 11.8
1867 Male, age 76, both hemispheres 24.6
2436 Male, age 74, both hemispheres 15.0
2137 Male, age 80, left hemisphere 8.6
2620 Female, age 94, left hemisphere 8.6
1891 Female, age 85, both hemispheres 7.2
2861 Female, age 67, both hemispheres 6.8
Parahippocampal cortex
nTPM: 7.8
2018 Male, age 76, both hemispheres 20.0
2532 Female, age 72, left hemisphere 8.9
2250 Female, age 67, right hemisphere 7.7
1990 Female, age 91, right hemisphere 7.5
2245 Female, age 91, both hemispheres 7.2
2622 Female, age 67, right hemisphere 6.6
1850 Male, age 80, both hemispheres 6.5
1933 Female, age 85, both hemispheres 6.2
2693 Female, age 94, both hemispheres 5.0
2692 Male, age 74, both hemispheres 2.5
Perirhinal gyrus
nTPM: 7.4
1841 Female, age 85, right hemisphere 10.7
2521 Female, age 94, right hemisphere 8.2
1794 Male, age 80, right hemisphere 7.8
2848 Male, age 76, right hemisphere 6.4
1847 Female, age 91, left hemisphere 3.9
Subiculum
nTPM: 9.8
2042 Male, age 76, both hemispheres 22.3
2729 Female, age 91, right hemisphere 10.9
1901 Male, age 80, both hemispheres 8.2
2438 Female, age 94, left hemisphere 6.9
2619 Male, age 74, both hemispheres 6.1
1977 Female, age 85, both hemispheres 4.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 44.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.7
Samples: 197

Max nTPM: 354.3
Min nTPM: 4.2
Std nTPM: 55.8
Median nTPM: 25.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 354.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 340.2
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 297.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 281.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 274.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 186.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 178.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 167.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 163.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 157.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 146.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 35.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.4
FF:10153-102I9 76 years, female 37.6
FF:10169-103B7 60 years, female 33.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.2
Pig sample Sample description nTPM
Subiculum
nTPM: 16.3
Samples: 4

Max nTPM: 22.6
Min nTPM: 9.8
Sample A Female 22.6
Sample B Female 12.6
Sample C Male 9.8
Sample D Male 20.1
Dorsal hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 38.1
Min nTPM: 16.9
Sample A Female 38.1
Sample B Female 16.9
Sample C Male 34.4
Sample D Male 19.5
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 15.3
Min nTPM: 9.7
Sample A Female 15.3
Sample B Female 15.1
Sample C Male 14.9
Sample D Male 9.7
Ventral hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 27.9
Min nTPM: 15.3
Sample A Female 27.9
Sample B Female 15.3
Sample C Male 15.9
Sample D Male 22.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.9
Sample A Male 4.9
Sample B Male 5.2
Sample C Female 5.4
Sample D Female 4.9
Hippocampal formation
nTPM: 2.4
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.4
Sample A Male 3.5
Sample B Male 1.4
Sample C Female 1.9
Sample D Female 2.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70813897 Antisense, RP_050725_02_E09, Mouse strain C57BL/6J (56 days, male) 0.3
68191372 Antisense, RP_041129_01_A09, Mouse strain C57BL/6J (56 days, male) 0.0

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