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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NREP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
189.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
187.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
180.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
132.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
131.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
108.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
101.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
96.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
73.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
66.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
64.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
58.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
57.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
52.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
47.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
44.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
42.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
35.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
33.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
31.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
29.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
27.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
27.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
25.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
25.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
22.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
22.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
16.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NREP is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
298.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
257.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
222.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
197.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
178.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
178.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
176.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
176.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
172.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
169.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
166.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
166.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
157.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
156.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
151.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
150.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
150.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
149.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
147.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
147.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
145.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
143.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
143.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
140.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
140.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
139.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
138.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
138.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
137.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
136.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
135.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
135.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
134.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
134.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
133.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
133.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
133.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
132.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
132.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
132.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
131.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
130.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
130.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
128.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
128.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
128.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
127.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
127.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
127.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
126.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
125.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
124.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
124.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
124.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
124.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
123.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
122.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
122.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
122.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
122.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
122.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
122.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
121.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
121.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
121.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
119.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
118.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
117.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
117.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
117.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
117.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
116.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
115.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
115.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
115.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
115.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
114.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
114.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
114.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
113.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
112.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
112.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
112.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
111.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
111.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
111.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
110.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
110.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
109.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
109.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
109.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
108.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
108.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
107.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
107.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
106.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
106.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
106.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
105.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
105.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
104.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
103.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
103.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
103.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
103.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
103.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
102.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
102.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
102.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
102.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
101.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
101.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
101.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
101.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
101.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
101.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
100.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
100.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
100.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
100.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
100.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
100.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
100.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
100.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
99.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
99.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
98.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
98.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
98.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
98.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
98.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
98.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
98.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
98.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
97.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
97.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
97.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
97.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
97.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
96.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
96.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
96.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
96.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
96.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
96.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
96.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
96.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
95.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
94.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
94.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
94.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
94.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
94.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
93.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
93.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
93.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
93.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
92.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
92.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
92.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
92.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
92.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
91.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
91.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
90.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
90.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
90.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
90.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
90.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
90.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
89.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
89.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
89.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
89.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
89.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
88.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
88.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
88.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
87.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
87.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
87.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
87.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
87.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
87.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
87.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
86.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
86.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
86.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
85.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
85.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
84.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
84.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
84.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
84.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
83.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
83.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
83.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
83.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
83.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
82.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
82.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
82.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
82.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
82.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
82.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
82.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
82.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
82.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
82.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
82.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
81.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
81.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
81.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
81.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
81.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
81.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
81.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
81.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
81.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
81.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
80.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
80.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
80.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
80.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
80.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
80.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
80.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
80.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
79.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
79.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
79.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
79.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
79.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
79.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
79.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
79.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
79.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
79.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
78.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
78.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
78.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
78.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
78.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
78.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
78.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
78.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
78.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
77.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
77.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
76.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
76.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
75.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
75.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
75.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
75.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
75.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
75.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
74.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
74.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
74.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
74.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
73.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
73.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
73.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
73.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
73.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
73.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
73.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
72.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
72.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
72.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
72.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
72.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
72.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
72.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
71.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
71.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
71.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
71.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
71.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
71.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
70.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
70.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
70.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
70.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
69.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
69.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
69.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
69.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
69.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
69.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
69.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
68.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
68.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
68.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
68.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
68.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
67.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
67.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
67.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
67.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
67.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
66.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
66.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
66.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
66.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
66.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
66.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
66.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
65.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
65.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
65.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
65.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
65.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
64.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
64.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
64.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
64.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
64.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
64.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
63.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
63.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
63.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
62.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
62.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
62.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
62.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
62.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
62.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
62.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
61.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
61.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
61.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
61.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
61.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
61.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
61.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
60.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
60.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
60.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
60.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
59.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
59.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
59.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
59.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
59.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
58.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
58.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
58.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
58.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
58.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
58.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
58.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
57.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
57.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
57.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
57.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
57.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
57.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
57.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
57.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
56.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
56.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
56.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
56.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
55.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
55.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
55.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
54.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
54.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
54.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
54.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
54.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
53.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
53.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
53.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
53.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
52.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
52.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
52.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
52.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
52.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
51.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
51.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
51.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
51.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
51.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
51.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
51.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
50.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
50.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
50.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
49.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
49.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
49.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
49.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
48.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
48.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
48.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
48.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
47.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
47.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
47.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
47.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
47.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
47.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
47.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
46.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
45.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
45.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
45.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
44.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
44.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
44.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
44.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
44.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
44.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
43.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
43.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
43.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
42.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
42.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
42.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
42.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
42.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
42.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
41.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
41.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
41.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
41.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
41.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
40.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
40.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
40.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
40.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
40.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
39.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
39.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
39.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
38.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
38.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
38.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
37.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
37.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
37.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
36.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
36.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
36.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
36.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
36.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
35.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
34.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
34.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
34.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
33.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
33.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
33.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
32.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
32.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
32.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
32.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
31.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
31.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
31.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
31.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
31.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
31.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
30.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
30.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
30.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
29.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
29.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
29.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
28.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
28.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
28.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
28.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
26.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
26.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
23.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
23.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
22.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
22.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
19.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
9.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NREP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
331.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
259.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
208.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
189.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
186.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
181.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
174.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
169.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
166.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
157.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
156.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
151.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
139.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
135.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
133.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
119.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
118.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
116.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
113.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
106.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
105.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
104.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
103.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
101.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
101.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
101.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
100.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
100.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
100.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
100.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
99.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
98.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
96.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
92.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
92.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
91.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
90.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
90.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
90.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
90.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
90.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
89.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
89.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
89.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
88.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
87.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
87.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
86.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
85.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
84.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
84.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
83.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
82.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
80.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
79.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
77.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
76.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
73.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
72.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
72.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
72.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
69.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
69.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
69.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
68.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
68.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
67.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
65.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
62.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
60.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
59.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
59.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
58.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
57.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
57.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
57.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
57.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
55.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
55.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
53.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
53.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
51.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
50.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
49.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
42.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
33.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
33.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
31.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
30.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
26.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
23.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NREP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
82.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
754.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
506.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
401.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
376.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
342.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
322.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
314.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
306.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
303.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
299.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
298.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
292.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
285.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
276.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
275.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
271.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
235.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
234.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
220.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
219.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
215.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
214.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
210.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
202.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
197.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
196.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
190.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
188.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
186.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
173.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
169.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
167.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
166.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
163.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
150.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
146.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
142.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
138.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
133.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
132.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
131.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
129.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
129.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
127.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
125.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
125.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
122.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
121.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
121.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
120.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
120.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
119.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
117.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
117.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
112.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
112.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
111.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
111.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
106.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
105.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
104.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
103.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
103.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
103.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
102.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
101.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
98.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
94.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
94.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
92.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
92.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
91.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
90.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
90.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
89.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
88.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
88.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
87.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
86.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
86.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
85.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
83.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
83.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
83.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
82.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
82.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
82.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
81.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
80.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
79.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
79.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
78.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
76.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
75.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
75.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
75.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
75.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
74.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
74.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
73.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
73.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
73.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
72.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
72.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
72.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
72.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
71.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
71.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
71.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
71.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
71.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
70.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
69.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
69.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
69.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
68.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
68.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
66.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
66.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
66.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
65.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
64.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
64.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
63.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
63.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
63.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
63.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
62.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
62.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
62.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
61.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
61.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
61.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
60.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
58.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
58.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
58.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
57.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
57.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
57.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
57.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
57.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
56.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
56.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
55.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
55.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
54.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
52.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
51.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
50.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
50.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
50.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
49.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
48.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
48.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
48.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
48.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
48.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
48.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
47.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
47.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
46.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
46.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
46.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
46.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
46.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
46.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
45.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
44.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
44.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
44.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
43.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
42.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
41.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
41.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
41.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
40.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
40.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
40.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
39.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
39.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
39.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
39.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
39.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
38.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
38.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
38.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
38.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
38.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
38.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
38.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
38.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
37.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
36.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
36.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
36.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
36.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
35.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
35.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
34.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
34.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
34.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
34.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
33.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
33.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
32.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
32.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
32.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
32.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
31.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
31.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
31.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
31.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
30.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
30.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
29.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
29.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
27.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
27.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
27.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
27.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
27.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
26.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
26.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
26.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
25.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
25.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
23.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
22.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
21.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
21.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
20.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
17.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
13.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
10.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
9.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
