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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED7 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
103.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
81.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
80.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
69.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
66.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
66.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
65.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
64.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
59.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
58.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
57.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
55.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
55.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
55.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
54.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
53.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
48.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
47.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
47.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
46.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
45.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
45.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
44.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
43.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
43.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
42.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
42.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
42.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
41.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
37.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
36.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
34.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
34.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
33.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
32.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
32.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
30.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
29.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
28.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
27.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
26.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
25.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
24.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
23.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
23.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
23.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
18.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
17.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED7 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
305.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
292.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
149.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
139.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
117.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
116.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
108.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
106.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
102.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
102.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
100.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
100.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
99.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
99.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
99.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
98.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
98.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
97.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
97.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
96.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
94.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
93.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
93.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
92.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
92.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
92.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
90.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
90.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
90.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
89.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
89.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
89.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
87.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
87.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
86.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
86.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
86.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
85.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
85.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
85.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
85.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
84.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
84.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
84.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
84.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
83.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
83.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
83.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
83.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
82.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
82.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
81.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
81.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
81.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
81.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
81.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
81.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
80.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
80.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
80.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
79.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
79.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
79.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
78.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
78.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
78.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
78.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
78.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
77.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
77.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
77.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
77.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
76.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
76.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
76.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
76.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
76.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
75.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
74.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
74.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
74.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
74.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
74.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
74.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
73.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
73.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
73.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
73.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
73.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
73.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
73.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
73.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
72.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
72.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
72.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
71.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
71.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
71.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
71.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
71.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
71.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
70.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
70.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
70.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
70.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
70.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
70.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
69.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
69.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
69.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
68.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
68.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
68.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
68.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
68.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
68.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
67.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
67.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
67.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
66.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
66.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
66.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
66.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
66.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
66.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
66.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
66.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
66.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
66.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
66.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
65.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
65.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
65.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
65.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
65.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
65.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
64.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
64.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
64.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
64.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
64.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
64.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
63.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
63.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
63.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
63.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
63.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
63.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
62.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
62.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
62.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
62.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
62.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
62.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
62.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
62.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
62.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
61.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
61.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
61.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
61.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
61.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
61.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
60.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
60.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
60.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
60.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
60.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
60.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
60.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
60.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
60.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
59.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
59.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
59.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
59.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
59.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
59.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
59.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
59.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
58.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
58.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
58.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
58.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
57.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
57.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
57.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
57.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
57.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
57.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
57.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
57.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
57.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
57.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
57.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
57.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
57.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
56.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
56.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
56.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
56.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
56.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
56.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
56.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
56.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
56.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
56.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
56.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
55.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
55.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
55.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
55.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
55.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
55.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
55.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
55.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
55.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
55.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
54.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
54.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
54.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
54.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
54.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
54.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
53.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
53.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
53.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
53.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
53.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
53.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
53.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
53.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
53.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
53.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
53.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
53.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
52.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
52.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
52.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
52.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
52.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
52.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
52.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
52.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
52.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
52.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
52.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
51.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
51.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
51.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
51.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
51.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
51.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
51.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
51.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
51.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
51.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
51.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
50.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
50.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
50.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
50.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
50.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
50.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
50.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
50.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
50.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
50.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
50.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
50.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
49.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
49.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
49.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
49.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
49.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
49.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
48.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
48.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
48.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
48.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
48.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
48.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
48.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
48.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
48.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
47.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
47.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
47.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
47.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
47.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
47.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
47.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
47.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
47.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
47.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
47.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
46.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
46.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
46.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
45.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
45.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
45.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
45.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
45.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
45.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
45.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
45.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
45.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
45.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
45.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
44.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
44.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
44.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
44.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
43.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
43.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
43.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
43.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
43.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
43.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
42.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
42.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
42.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
42.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
42.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
42.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
42.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
42.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
42.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
42.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
42.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
41.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
41.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
41.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
41.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
41.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
41.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
41.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
41.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
40.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
40.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
40.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
40.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
40.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
40.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
40.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
40.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
39.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
39.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
39.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
39.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
39.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
39.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
39.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
39.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
39.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
38.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
38.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
38.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
38.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
38.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
38.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
38.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
37.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
37.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
37.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
37.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
37.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
37.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
37.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
37.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
36.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
36.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
36.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
36.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
35.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
35.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
35.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
35.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
35.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
35.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
35.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
35.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
35.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
34.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
34.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
34.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
34.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
34.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
34.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
34.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
33.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
33.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
33.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
33.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
33.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
33.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
33.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
33.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
32.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
32.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
32.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
31.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
31.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
31.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
31.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
30.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
30.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
30.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
30.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
29.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
29.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
29.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
29.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
28.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
28.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
28.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
28.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
27.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
27.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
27.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
27.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
27.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
26.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
26.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
26.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
26.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
26.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
26.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
25.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
24.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
24.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
23.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
22.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
22.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
21.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
21.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
21.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
19.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
19.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
12.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED7 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
70.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
121.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
121.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
119.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
118.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
114.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
110.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
108.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
105.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
103.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
102.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
100.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
98.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
98.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
98.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
97.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
96.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
95.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
95.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
94.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
93.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
91.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
91.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
91.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
91.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
89.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
87.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
87.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
87.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
85.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
84.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
84.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
84.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
83.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
83.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
82.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
82.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
81.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
81.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
77.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
76.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
74.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
73.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
72.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
72.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
72.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
71.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
70.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
70.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
69.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
69.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
69.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
68.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
65.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
65.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
65.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
64.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
64.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
63.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
63.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
61.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
60.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
60.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
60.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
59.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
58.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
57.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
57.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
56.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
55.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
55.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
54.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
54.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
54.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
53.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
51.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
49.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
48.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
48.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
47.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
47.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
46.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
45.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
40.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
40.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
39.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
38.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
37.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
37.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
36.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
36.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
34.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED7 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
150.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
121.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
103.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
97.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
84.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
75.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
70.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
66.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
66.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
63.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
62.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
61.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
57.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
56.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
56.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
55.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
53.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
53.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
53.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
52.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
51.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
51.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
51.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
50.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
49.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
48.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
48.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
47.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
47.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
46.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
46.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
45.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
44.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
44.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
43.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
42.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
42.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
42.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
41.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
41.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
41.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
41.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
41.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
40.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
40.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
39.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
39.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
39.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
39.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
39.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
39.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
39.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
38.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
38.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
38.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
38.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
38.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
37.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
37.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
37.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
37.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
37.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
37.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
37.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
36.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
36.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
36.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
36.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
35.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
35.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
35.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
34.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
34.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
33.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
33.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
33.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
33.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
33.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
32.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
31.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
31.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
31.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
31.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
30.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
30.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
30.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
30.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
30.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
30.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
30.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
30.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
30.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
30.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
29.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
29.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
29.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
28.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
28.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
28.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
28.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
27.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
27.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
26.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
26.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
26.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
26.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
26.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
25.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
25.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
24.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
24.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
24.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
23.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
23.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
22.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
22.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
21.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
21.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
19.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
19.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
18.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
17.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
16.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
15.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
15.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
14.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
13.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
6.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
