We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM165 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
99.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
81.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
68.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
68.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
67.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
60.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
58.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
57.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
56.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
51.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
48.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
48.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
47.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
46.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
44.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
41.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
40.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
38.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
37.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
36.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
36.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
36.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
35.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
32.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
32.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
30.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
30.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
29.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
29.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
29.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
29.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
29.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
29.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
29.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
28.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
28.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
27.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
27.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
27.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
27.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
26.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
26.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
25.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
25.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
25.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
24.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
24.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
24.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
24.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
23.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
23.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
23.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
23.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
22.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
22.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
22.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
22.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
21.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
21.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
21.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
21.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
21.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
20.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
20.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
20.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
20.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
20.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
20.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
19.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
19.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
19.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
19.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
19.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
19.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
19.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
18.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
18.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
18.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
18.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
18.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
18.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
18.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
18.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
17.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
17.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
17.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
17.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
17.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
17.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
17.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
16.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
16.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
16.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
16.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
16.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
16.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
16.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
16.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
16.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
16.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
15.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
15.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
15.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
15.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
15.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
15.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
15.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
15.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
14.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
14.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
14.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
14.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
14.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
14.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
14.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
14.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
14.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
14.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
14.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
13.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
13.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
13.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
13.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
13.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
13.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
13.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
13.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
13.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
12.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
12.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
12.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
12.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
12.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
12.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
12.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
12.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
12.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
11.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
11.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
11.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
11.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
11.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
11.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
10.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
10.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
10.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
10.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
10.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
9.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
9.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
9.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
9.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
9.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
8.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
8.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
8.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
8.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
8.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
8.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
5.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
4.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
3.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
3.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
2.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM165 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.2
Number of samples
231
Samples
Sample
Description
TPM
DO45205
0 years, female, NA, stage:2, dead, 90 days
99.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
70.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
66.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
65.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
58.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
57.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
52.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
51.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
50.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
48.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
48.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
48.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
47.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
46.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
46.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
45.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
43.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
42.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
41.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
41.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
39.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
38.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
38.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
36.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
36.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
35.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
35.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
34.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
34.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
34.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
33.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
32.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
31.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
31.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
30.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
29.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
29.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
29.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
29.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
29.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
28.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
28.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
27.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
27.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
27.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
27.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
26.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
26.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
26.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
26.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
25.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
25.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
25.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
25.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
24.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
24.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
24.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
24.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
23.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
23.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
22.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
22.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
22.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
22.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
22.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
22.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
22.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
21.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
21.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
21.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
21.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
20.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
20.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
20.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
20.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
20.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
20.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
20.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
20.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
19.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
19.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
19.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
19.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
19.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
19.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
19.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
19.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
19.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
18.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
18.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
17.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
17.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
16.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
16.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
16.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
16.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
16.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
16.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
16.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
16.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
16.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
15.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
15.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
15.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
15.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
15.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
15.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
15.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
15.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
15.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
14.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
14.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
14.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
14.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
14.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
14.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
13.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
13.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
13.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
13.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
12.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
12.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
12.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
12.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
11.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
10.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
10.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
10.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
9.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
9.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
9.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
8.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
7.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
7.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
7.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
6.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
4.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
2.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
1.9
395
Tumor
1.8
427
Tumor
1.6
471
Tumor
1.4
283
Tumor
1.2
285
Tumor
1.2
491
Tumor
1.2
823
Tumor
1.2
943
Tumor
1.1
911
Tumor
1.1
311
Tumor
1.1
743
Tumor
1.0
983
Tumor
1.0
951
Tumor
1.0
917
Tumor
1.0
125
Tumor
1.0
343
Tumor
0.9
327
Tumor
0.9
536
Normal
0.9
413
Tumor
0.9
697
Tumor
0.9
545
Tumor
0.9
535
Tumor
0.9
525
Tumor
0.9
957
Tumor
0.9
1021
Tumor
0.8
724
Normal
0.8
1025
Tumor
0.8
913
Tumor
0.8
865
Tumor
0.8
817
Tumor
0.8
573
Tumor
0.8
661
Tumor
0.7
533
Tumor
0.7
965
Tumor
0.7
937
Tumor
0.7
351
Tumor
0.7
257
Tumor
0.7
1015
Tumor
0.7
223
Tumor
0.7
313
Tumor
0.7
527
Tumor
0.7
385
Tumor
0.6
447
Tumor
0.6
981
Tumor
0.6
187
Tumor
0.6
1041
Tumor
0.6
814
Normal
0.5
355
Tumor
0.5
923
Tumor
0.5
671
Tumor
0.5
523
Tumor
0.5
713
Tumor
0.5
1013
Tumor
0.5
557
Tumor
0.5
451
Tumor
0.4
813
Tumor
0.4
367
Tumor
0.4
145
Tumor
0.3
383
Tumor
0.3
161
Tumor
0.3
467
Tumor
0.3
537
Tumor
0.3
975
Tumor
0.3
861
Tumor
0.3
375
Tumor
0.3
497
Tumor
0.3
191
Tumor
0.3
455
Tumor
0.3
815
Tumor
0.2
953
Tumor
0.2
921
Tumor
0.2
461
Tumor
0.2
217
Tumor
0.2
227
Tumor
0.2
1045
Tumor
0.2
967
Tumor
0.2
617
Tumor
0.2
745
Tumor
0.2
721
Tumor
0.2
463
Tumor
0.2
883
Tumor
0.2
978
Normal
0.2
567
Tumor
0.2
477
Tumor
0.2
213
Tumor
0.2
331
Tumor
0.2
881
Tumor
0.2
492
Normal
0.1
851
Tumor
0.1
1043
Tumor
0.1
421
Tumor
0.1
647
Tumor
0.1
137
Tumor
0.1
188
Normal
0.1
487
Tumor
0.1
873
Tumor
0.1
297
Tumor
0.1
271
Tumor
0.1
391
Tumor
0.1
393
Tumor
0.1
141
Tumor
0.1
982
Normal
0.1
473
Tumor
0.1
755
Tumor
0.0
433
Tumor
0.0
131
Tumor
0.0
498
Normal
0.0
434
Normal
0.0
517
Tumor
0.0
353
Tumor
0.0
478
Normal
0.0
963
Tumor
0.0
867
Tumor
0.0
261
Tumor
0.0
361
Tumor
0.0
877
Tumor
0.0
863
Tumor
0.0
524
Normal
0.0
221
Tumor
0.0
857
Tumor
0.0
665
Tumor
0.0
663
Tumor
0.0
384
Normal
0.0
267
Tumor
0.0
286
Normal
0.0
365
Tumor
0.0
262
Normal
0.0
135
Tumor
-0.1
368
Normal
-0.1
445
Tumor
-0.1
1027
Tumor
-0.1
563
Tumor
-0.1
148
Normal
-0.1
868
Normal
-0.1
1016
Normal
-0.1
224
Normal
-0.1
284
Normal
-0.1
955
Tumor
-0.1
514
Normal
-0.1
113
Tumor
-0.1
212
Normal
-0.1
387
Tumor
-0.1
444
Normal
-0.1
916
Normal
-0.1
696
Normal
-0.1
494
Normal
-0.1
553
Tumor
-0.1
362
Normal
-0.1
515
Tumor
-0.2
186
Normal
-0.2
357
Tumor
-0.2
172
Normal
-0.2
727
Tumor
-0.2
715
Tumor
-0.2
185
Tumor
-0.2
268
Normal
-0.2
195
Tumor
-0.2
112
Tumor
-0.2
192
Normal
-0.2
526
Normal
-0.2
952
Normal
-0.2
956
Normal
-0.2
127
Tumor
-0.2
538
Normal
-0.2
662
Normal
-0.2
341
Tumor
-0.2
363
Tumor
-0.2
366
Normal
-0.2
493
Tumor
-0.2
228
Normal
-0.2
635
Tumor
-0.2
376
Normal
-0.2
136
Normal
-0.2
415
Tumor
-0.2
124
Normal
-0.2
558
Normal
-0.2
984
Normal
-0.3
352
Normal
-0.3
138
Normal
-0.3
977
Tumor
-0.3
1028
Normal
-0.3
483
Tumor
-0.3
874
Normal
-0.3
488
Normal
-0.3
966
Normal
-0.3
672
Normal
-0.3
123
Tumor
-0.3
147
Tumor
-0.3
954
Normal
-0.3
358
Normal
-0.3
958
Normal
-0.3
518
Normal
-0.3
162
Normal
-0.3
641
Tumor
-0.3
785
Tumor
-0.3
474
Normal
-0.3
146
Normal
-0.3
396
Normal
-0.3
1014
Normal
-0.3
354
Normal
-0.3
574
Normal
-0.3
968
Normal
-0.4
423
Tumor
-0.4
232
Normal
-0.4
741
Tumor
-0.4
443
Tumor
-0.4
1044
Normal
-0.4
722
Normal
-0.4
976
Normal
-0.4
1031
Tumor
-0.4
481
Tumor
-0.4
126
Normal
-0.4
277
Tumor
-0.4
513
Tumor
-0.4
484
Normal
-0.4
446
Normal
-0.4
312
Normal
-0.4
737
Tumor
-0.4
914
Normal
-0.4
432
Normal
-0.4
925
Tumor
-0.4
392
Normal
-0.4
686
Normal
-0.4
728
Normal
-0.4
615
Tumor
-0.4
528
Normal
-0.4
142
Normal
-0.4
328
Normal
-0.4
516
Normal
-0.4
344
Normal
-0.4
884
Normal
-0.4
386
Normal
-0.4
918
Normal
-0.4
944
Normal
-0.4
1042
Normal
-0.4
218
Normal
-0.4
664
Normal
-0.4
568
Normal
-0.5
394
Normal
-0.5
572
Normal
-0.5
114
Normal
-0.5
866
Normal
-0.5
627
Tumor
-0.5
714
Normal
-0.5
915
Tumor
-0.5
411
Tumor
-0.5
424
Normal
-0.5
428
Normal
-0.5
416
Normal
-0.5
1026
Normal
-0.5
356
Normal
-0.5
938
Normal
-0.5
342
Normal
-0.5
642
Normal
-0.5
472
Normal
-0.5
648
Normal
-0.5
425
Tumor
-0.5
462
Normal
-0.5
231
Tumor
-0.5
448
Normal
-0.5
422
Normal
-0.5
414
Normal
-0.5
431
Tumor
-0.5
272
Normal
-0.5
171
Tumor
-0.5
964
Normal
-0.5
864
Normal
-0.6
564
Normal
-0.6
777
Tumor
-0.6
214
Normal
-0.6
636
Normal
-0.6
436
Normal
-0.6
332
Normal
-0.6
666
Normal
-0.6
534
Normal
-0.6
852
Normal
-0.6
435
Tumor
-0.6
278
Normal
-0.6
571
Tumor
-0.6
1022
Normal
-0.6
258
Normal
-0.6
364
Normal
-0.6
412
Normal
-0.6
456
Normal
-0.6
554
Normal
-0.6
468
Normal
-0.6
628
Normal
-0.7
111
Normal
-0.7
1032
Normal
-0.7
388
Normal
-0.7
778
Normal
-0.7
314
Normal
-0.7
926
Normal
-0.7
716
Normal
-0.7
1046
Normal
-0.7
924
Normal
-0.7
862
Normal
-0.7
546
Normal
-0.7
298
Normal
-0.7
616
Normal
-0.7
882
Normal
-0.7
426
Normal
-0.7
738
Normal
-0.7
618
Normal
-0.7
132
Normal
-0.7
816
Normal
-0.8
786
Normal
-0.8
912
Normal
-0.8
695
Tumor
-0.8
685
Tumor
-0.8
482
Normal
-0.8
878
Normal
-0.8
128
Normal
-0.8
818
Normal
-0.8
858
Normal
-0.9
756
Normal
-0.9
222
Normal
-0.9
723
Tumor
-0.9
824
Normal
-0.9
464
Normal
-0.9
466
Normal
-0.9
196
Normal
-0.9
922
Normal
-1.0
742
Normal
-1.0
744
Normal
-1.0
698
Normal
-1.1
746
Normal
-1.1
452
Normal
-1.2
465
Tumor
-1.5
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
