HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:45.1 nTPM
HPA Brain:58.1 nTPM
GTEx:45.1 nTPM
FANTOM5:84.5 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:29.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038299
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 58.1
Sample id Sample description nTPM
Hippocampus
nTPM: 45.4
2529 Female, age 94, left hemisphere 62.9
1911 Female, age 85, right hemisphere 56.3
1898 Male, age 80, left hemisphere 48.7
2621 Female, age 67, right hemisphere 39.5
1855 Male, age 76, left hemisphere 34.6
2148 Female, age 91, left hemisphere 30.6
Dentate gyrus
nTPM: 46.3
2530 Female, age 94, left hemisphere 76.6
2010 Male, age 76, both hemispheres 55.3
2246 Female, age 85, both hemispheres 41.6
2528 Male, age 74, both hemispheres 39.9
2531 Female, age 67, both hemispheres 33.2
1927 Female, age 91, both hemispheres 31.2
Entorhinal gyrus
nTPM: 51.2
2117 Female, age 91, right hemisphere 81.1
2764 Male, age 80, right hemisphere 70.8
1787 Male, age 76, left hemisphere 43.2
1938 Female, age 85, left hemisphere 43.1
2613 Female, age 94, left hemisphere 41.6
2686 Male, age 75, right hemisphere 27.5
Hippocampus, CA1
nTPM: 36.4
2749 Male, age 80, left hemisphere 47.3
1873 Female, age 85, both hemispheres 43.0
2527 Male, age 74, both hemispheres 42.3
2045 Male, age 76, both hemispheres 25.6
2082 Female, age 91, right hemisphere 24.0
Hippocampus, CA2
nTPM: 49.2
1963 Male, age 80, left hemisphere 66.4
1940 Female, age 85, left hemisphere 55.3
2249 Male, age 74, both hemispheres 55.1
2437 Female, age 94, left hemisphere 51.0
2113 Female, age 91, right hemisphere 36.6
1892 Male, age 76, both hemispheres 30.6
Hippocampus, CA3
nTPM: 34.9
1891 Female, age 85, both hemispheres 56.9
1867 Male, age 76, both hemispheres 39.6
2436 Male, age 74, both hemispheres 31.6
2620 Female, age 94, left hemisphere 30.3
2861 Female, age 67, both hemispheres 26.4
2137 Male, age 80, left hemisphere 24.7
Parahippocampal cortex
nTPM: 39.6
2532 Female, age 72, left hemisphere 53.2
1990 Female, age 91, right hemisphere 52.7
2692 Male, age 74, both hemispheres 49.3
1933 Female, age 85, both hemispheres 44.1
2245 Female, age 91, both hemispheres 43.3
2018 Male, age 76, both hemispheres 42.6
1850 Male, age 80, both hemispheres 33.4
2250 Female, age 67, right hemisphere 30.0
2693 Female, age 94, both hemispheres 26.6
2622 Female, age 67, right hemisphere 21.2
Perirhinal gyrus
nTPM: 29.7
2521 Female, age 94, right hemisphere 36.7
1794 Male, age 80, right hemisphere 35.2
2848 Male, age 76, right hemisphere 28.6
1847 Female, age 91, left hemisphere 24.1
1841 Female, age 85, right hemisphere 23.9
Subiculum
nTPM: 58.1
2042 Male, age 76, both hemispheres 88.2
1901 Male, age 80, both hemispheres 71.4
1977 Female, age 85, both hemispheres 63.4
2619 Male, age 74, both hemispheres 42.4
2729 Female, age 91, right hemisphere 42.3
2438 Female, age 94, left hemisphere 41.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.1
Samples: 197

Max nTPM: 138.0
Min nTPM: 10.3
Std nTPM: 23.2
Median nTPM: 39.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 138.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 130.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 129.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 107.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 104.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 99.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 97.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 97.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 96.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 95.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 94.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 84.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.5
FF:10153-102I9 76 years, female 91.1
FF:10169-103B7 60 years, female 77.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.2
Pig sample Sample description nTPM
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.5
Sample A Female 14.3
Sample B Female 11.5
Sample C Male 12.2
Sample D Male 14.6
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 15.9
Min nTPM: 12.4
Sample A Female 15.9
Sample B Female 12.4
Sample C Male 14.0
Sample D Male 12.6
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.6
Sample A Female 14.9
Sample B Female 16.3
Sample C Male 12.9
Sample D Male 12.6
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 13.3
Min nTPM: 12.1
Sample A Female 13.1
Sample B Female 12.1
Sample C Male 12.8
Sample D Male 13.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 32.2
Min nTPM: 25.3
Sample A Male 29.7
Sample B Male 32.2
Sample C Female 29.0
Sample D Female 25.3
Hippocampal formation
nTPM: 30.0
Samples: 4

Max nTPM: 32.7
Min nTPM: 27.3
Sample A Male 32.7
Sample B Male 30.2
Sample C Female 27.3
Sample D Female 29.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70191979 Antisense, RP_050517_01_A03, Mouse strain C57BL/6J (56 days, male) 0.3

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