Expression of TMEM258 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TMEM258 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 83.98

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

103.1

Number of samples

362

Samples

Sample	Description	TPM
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	481.7
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	335.9
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	316.2
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	312.6
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	295.0
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	266.2
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	254.7
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	235.8
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	234.5
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	229.2
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	226.2
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	222.6
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	212.3
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	206.4
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	199.0
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	197.2
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	197.0
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	194.6
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	194.4
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	190.7
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	186.2
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	182.5
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	181.9
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	180.6
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	178.7
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	174.9
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	171.8
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	171.7
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	171.6
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	168.9
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	168.8
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	165.0
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	161.7
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	161.2
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	160.4
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	158.9
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	157.3
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	156.5
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	153.4
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	153.2
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	152.6
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	151.2
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	150.9
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	150.8
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	150.1
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	149.6
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	149.6
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	149.3
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	148.6
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	148.2
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	146.7
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	145.2
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	144.0
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	141.4
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	141.3
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	141.1
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	139.8
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	137.3
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	136.8
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	136.1
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	135.9
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	135.9
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	135.6
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	135.3
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	134.6
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	133.9
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	133.2
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	132.2
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	132.0
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	132.0
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	131.8
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	131.7
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	130.8
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	130.7
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	130.4
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	129.5
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	128.8
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	128.8
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	128.6
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	128.2
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	128.1
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	128.0
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	127.6
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	127.5
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	127.5
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	127.0
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	126.5
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	124.3
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	124.3
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	123.6
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	123.4
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	123.4
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	123.4
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	123.2
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	123.2
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	122.9
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	122.5
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	122.0
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	121.7
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	121.4
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	121.2
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	121.2
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	121.0
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	120.1
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	119.7
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	119.5
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	118.8
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	118.5
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	117.7
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	117.6
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	117.0
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	116.6
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	115.6
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	115.5
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	114.1
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	113.8
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	113.4
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	113.4
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	112.2
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	112.1
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	112.1
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	111.4
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	109.8
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	109.1
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	108.8
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	108.6
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	107.4
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	107.0
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	106.9
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	106.8
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	106.5
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	106.0
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	105.8
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	105.3
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	104.8
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	104.6
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	104.6
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	103.6
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	102.9
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	102.6
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	102.1
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	101.7
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	101.6
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	101.6
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	101.3
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	100.8
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	100.6
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	100.4
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	100.2
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	100.1
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	99.9
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	99.7
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	99.5
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	99.4
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	99.3
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	99.2
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	98.6
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	98.3
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	98.1
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	97.9
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	97.7
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	97.3
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	97.2
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	96.7
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	96.3
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	96.1
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	96.1
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	95.5
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	94.5
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	94.4
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	94.0
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	94.0
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	93.2
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	92.8
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	92.6
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	92.4
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	92.3
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	92.3
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	91.9
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	91.5
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	90.9
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	90.9
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	90.8
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	90.7
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	90.7
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	90.3
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	90.2
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	90.0
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	89.2
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	89.1
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	89.0
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	89.0
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	88.7
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	88.4
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	88.1
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	88.0
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	88.0
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	87.3
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	87.0
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	86.9
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	86.8
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	86.7
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	86.5
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	86.5
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	86.4
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	86.2
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	86.2
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	86.1
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	85.5
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	85.2
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	84.8
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	84.0
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	83.9
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	83.8
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	83.1
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	83.0
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	82.6
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	82.2
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	82.0
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	81.4
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	81.3
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	81.1
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	81.0
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	80.7
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	80.7
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	80.5
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	80.5
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	80.1
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	80.1
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	79.9
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	79.9
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	79.3
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	79.2
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	79.1
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	79.1
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	79.0
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	79.0
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	78.9
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	78.9
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	78.7
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	78.7
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	78.5
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	78.4
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	78.4
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	78.2
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	77.9
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	77.7
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	77.4
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	77.1
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	76.3
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	75.7
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	75.3
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	75.0
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	74.1
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	74.0
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	73.9
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	73.7
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	73.2
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	73.1
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	72.6
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	72.5
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	72.4
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	72.4
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	72.2
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	72.0
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	71.8
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	71.6
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	71.1
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	71.1
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	70.4
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	70.0
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	70.0
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	69.6
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	69.3
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	68.5
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	68.3
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	68.2
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	68.2
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	68.0
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	67.8
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	67.6
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	67.4
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	67.3
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	66.5
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	66.3
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	66.0
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	65.7
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	64.6
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	64.4
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	64.3
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	63.9
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	63.8
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	63.7
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	63.6
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	63.6
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	62.8
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	62.8
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	62.3
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	62.2
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	61.8
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	61.7
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	61.5
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	61.4
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	60.9
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	60.3
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	60.2
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	60.1
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	60.0
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	60.0
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	59.3
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	59.2
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	59.0
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	58.7
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	58.1
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	57.7
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	57.5
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	56.9
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	56.9
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	56.8
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	56.5
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	56.3
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	56.2
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	56.1
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	56.0
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	55.0
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	54.8
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	54.6
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	54.5
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	53.8
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	53.6
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	53.6
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	53.0
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	53.0
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	52.7
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	52.6
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	52.5
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	52.1
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	52.0
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	51.6
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	51.2
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	51.2
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	51.1
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	51.1
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	50.3
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	50.2
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	49.9
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	49.8
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	49.7
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	49.6
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	49.2
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	48.3
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	48.3
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	48.1
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	47.2
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	46.5
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	45.7
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	43.8
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	43.1
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	40.9
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	39.1
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	38.7
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	36.0
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
1026	Normal	1.0
1028	Normal	0.9
964	Normal	0.9
1027	Tumor	0.9
352	Normal	0.9
958	Normal	0.9
342	Normal	0.9
1022	Normal	0.8
968	Normal	0.8
536	Normal	0.8
1032	Normal	0.8
868	Normal	0.8
481	Tumor	0.8
955	Tumor	0.8
1046	Normal	0.8
223	Tumor	0.7
482	Normal	0.7
858	Normal	0.7
944	Normal	0.7
756	Normal	0.7
698	Normal	0.7
554	Normal	0.7
672	Normal	0.7
697	Tumor	0.7
778	Normal	0.7
1016	Normal	0.7
636	Normal	0.7
1014	Normal	0.7
938	Normal	0.7
524	Normal	0.7
786	Normal	0.7
922	Normal	0.7
527	Tumor	0.7
954	Normal	0.7
746	Normal	0.7
696	Normal	0.7
112	Tumor	0.6
863	Tumor	0.6
534	Normal	0.6
232	Normal	0.6
448	Normal	0.6
376	Normal	0.6
695	Tumor	0.6
857	Tumor	0.6
818	Normal	0.6
615	Tumor	0.6
813	Tumor	0.6
926	Normal	0.6
344	Normal	0.6
1042	Normal	0.6
298	Normal	0.6
472	Normal	0.6
332	Normal	0.6
358	Normal	0.6
982	Normal	0.6
142	Normal	0.6
462	Normal	0.6
618	Normal	0.6
716	Normal	0.6
984	Normal	0.6
528	Normal	0.6
412	Normal	0.6
912	Normal	0.6
452	Normal	0.6
1044	Normal	0.6
477	Tumor	0.6
628	Normal	0.6
526	Normal	0.6
415	Tumor	0.6
616	Normal	0.5
364	Normal	0.5
686	Normal	0.5
728	Normal	0.5
918	Normal	0.5
445	Tumor	0.5
394	Normal	0.5
852	Normal	0.5
714	Normal	0.5
878	Normal	0.5
114	Normal	0.5
396	Normal	0.5
744	Normal	0.5
314	Normal	0.5
312	Normal	0.5
128	Normal	0.5
648	Normal	0.5
976	Normal	0.5
357	Tumor	0.5
354	Normal	0.5
666	Normal	0.5
456	Normal	0.5
824	Normal	0.5
392	Normal	0.5
514	Normal	0.5
617	Tumor	0.5
642	Normal	0.5
723	Tumor	0.5
356	Normal	0.4
546	Normal	0.4
258	Normal	0.4
478	Normal	0.4
814	Normal	0.4
464	Normal	0.4
518	Normal	0.4
468	Normal	0.4
664	Normal	0.4
568	Normal	0.4
136	Normal	0.4
111	Normal	0.4
214	Normal	0.4
353	Tumor	0.4
466	Normal	0.4
138	Normal	0.4
952	Normal	0.4
882	Normal	0.4
721	Tumor	0.4
474	Normal	0.4
388	Normal	0.4
662	Normal	0.4
368	Normal	0.4
261	Tumor	0.4
862	Normal	0.4
1021	Tumor	0.4
162	Normal	0.4
426	Normal	0.4
132	Normal	0.4
262	Normal	0.4
916	Normal	0.4
222	Normal	0.4
124	Normal	0.3
422	Normal	0.3
516	Normal	0.3
966	Normal	0.3
956	Normal	0.3
874	Normal	0.3
864	Normal	0.3
816	Normal	0.3
1045	Tumor	0.3
564	Normal	0.3
978	Normal	0.3
328	Normal	0.3
386	Normal	0.3
538	Normal	0.3
722	Normal	0.3
737	Tumor	0.3
366	Normal	0.3
924	Normal	0.3
742	Normal	0.3
148	Normal	0.3
755	Tumor	0.3
866	Normal	0.3
278	Normal	0.3
884	Normal	0.3
218	Normal	0.3
384	Normal	0.3
572	Normal	0.3
186	Normal	0.3
196	Normal	0.3
558	Normal	0.3
914	Normal	0.3
416	Normal	0.3
313	Tumor	0.3
738	Normal	0.3
127	Tumor	0.2
146	Normal	0.2
963	Tumor	0.2
574	Normal	0.2
272	Normal	0.2
465	Tumor	0.2
446	Normal	0.2
126	Normal	0.2
414	Normal	0.2
212	Normal	0.2
785	Tumor	0.2
172	Normal	0.2
913	Tumor	0.2
271	Tumor	0.2
428	Normal	0.2
268	Normal	0.2
286	Normal	0.1
362	Normal	0.1
1043	Tumor	0.1
436	Normal	0.1
432	Normal	0.1
431	Tumor	0.1
424	Normal	0.1
745	Tumor	0.1
393	Tumor	0.1
873	Tumor	0.1
188	Normal	0.1
727	Tumor	0.1
635	Tumor	0.1
861	Tumor	0.1
937	Tumor	0.1
777	Tumor	0.0
113	Tumor	0.0
434	Normal	0.0
671	Tumor	0.0
135	Tumor	0.0
391	Tumor	0.0
267	Tumor	0.0
224	Normal	0.0
228	Normal	0.0
387	Tumor	0.0
257	Tumor	0.0
284	Normal	-0.1
515	Tumor	-0.1
823	Tumor	-0.1
467	Tumor	-0.1
217	Tumor	-0.1
685	Tumor	-0.1
355	Tumor	-0.1
917	Tumor	-0.1
953	Tumor	-0.1
192	Normal	-0.1
627	Tumor	-0.1
395	Tumor	-0.1
421	Tumor	-0.1
563	Tumor	-0.1
455	Tumor	-0.1
724	Normal	-0.1
463	Tumor	-0.1
1025	Tumor	-0.1
145	Tumor	-0.1
867	Tumor	-0.1
451	Tumor	-0.1
665	Tumor	-0.1
444	Normal	-0.2
447	Tumor	-0.2
147	Tumor	-0.2
471	Tumor	-0.2
191	Tumor	-0.2
433	Tumor	-0.2
557	Tumor	-0.2
423	Tumor	-0.2
185	Tumor	-0.2
171	Tumor	-0.2
663	Tumor	-0.2
341	Tumor	-0.2
713	Tumor	-0.2
195	Tumor	-0.2
513	Tumor	-0.2
923	Tumor	-0.2
137	Tumor	-0.3
227	Tumor	-0.3
943	Tumor	-0.3
385	Tumor	-0.3
187	Tumor	-0.3
553	Tumor	-0.3
911	Tumor	-0.3
977	Tumor	-0.3
523	Tumor	-0.3
915	Tumor	-0.3
817	Tumor	-0.3
741	Tumor	-0.3
647	Tumor	-0.3
981	Tumor	-0.3
1015	Tumor	-0.3
383	Tumor	-0.3
883	Tumor	-0.4
361	Tumor	-0.4
365	Tumor	-0.4
473	Tumor	-0.4
297	Tumor	-0.4
1041	Tumor	-0.4
427	Tumor	-0.4
425	Tumor	-0.4
525	Tumor	-0.5
641	Tumor	-0.5
443	Tumor	-0.5
311	Tumor	-0.5
975	Tumor	-0.5
411	Tumor	-0.5
327	Tumor	-0.5
925	Tumor	-0.5
435	Tumor	-0.5
141	Tumor	-0.6
221	Tumor	-0.6
461	Tumor	-0.6
573	Tumor	-0.6
161	Tumor	-0.6
285	Tumor	-0.6
211	Tumor	-0.6
283	Tumor	-0.6
535	Tumor	-0.6
343	Tumor	-0.6
881	Tumor	-0.6
213	Tumor	-0.6
277	Tumor	-0.6
851	Tumor	-0.6
331	Tumor	-0.7
661	Tumor	-0.7
921	Tumor	-0.7
413	Tumor	-0.7
567	Tumor	-0.7
125	Tumor	-0.7
533	Tumor	-0.7
1013	Tumor	-0.7
815	Tumor	-0.7
571	Tumor	-0.7
231	Tumor	-0.8
545	Tumor	-0.8
865	Tumor	-0.8
951	Tumor	-0.8
983	Tumor	-0.9
375	Tumor	-0.9
1031	Tumor	-0.9
123	Tumor	-0.9
537	Tumor	-1.0
715	Tumor	-1.0
363	Tumor	-1.0
367	Tumor	-1.1
351	Tumor	-1.1
517	Tumor	-1.1
967	Tumor	-1.2
877	Tumor	-1.2
743	Tumor	-1.2
131	Tumor	-1.4
957	Tumor	-1.6
965	Tumor	-1.6
483	Tumor	N/A
484	Normal	N/A
487	Tumor	N/A
488	Normal	N/A
491	Tumor	N/A
492	Normal	N/A
493	Tumor	N/A
494	Normal	N/A
497	Tumor	N/A
498	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA044602
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS