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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPGS2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
147.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
138.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
112.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
94.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
92.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
89.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
84.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
75.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
75.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
73.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
69.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
67.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
67.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
64.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
64.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
64.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
63.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
60.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
60.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
59.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
58.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
58.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
57.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
56.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
55.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
51.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
50.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
50.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
50.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
50.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
49.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
49.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
48.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
48.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
48.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
47.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
47.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
46.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
46.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
46.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
45.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
43.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
40.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
39.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
38.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
36.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
36.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
36.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
35.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
35.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
34.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
33.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
33.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
28.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
26.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
26.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
23.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
23.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
22.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPGS2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
104.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
103.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
94.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
92.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
91.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
89.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
88.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
84.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
84.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
83.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
83.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
83.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
83.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
82.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
81.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
80.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
80.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
80.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
79.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
79.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
78.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
77.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
74.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
74.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
72.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
72.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
72.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
72.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
72.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
71.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
71.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
71.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
70.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
70.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
69.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
69.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
69.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
68.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
68.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
68.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
66.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
66.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
66.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
66.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
65.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
65.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
65.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
65.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
65.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
64.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
64.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
63.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
63.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
63.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
63.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
63.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
63.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
62.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
62.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
62.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
62.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
61.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
60.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
60.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
60.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
60.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
60.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
59.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
59.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
59.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
59.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
59.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
59.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
58.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
58.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
58.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
58.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
58.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
58.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
58.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
58.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
58.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
57.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
57.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
57.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
57.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
57.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
57.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
57.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
57.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
57.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
57.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
56.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
56.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
56.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
56.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
56.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
55.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
55.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
55.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
55.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
55.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
55.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
55.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
54.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
54.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
54.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
54.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
54.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
54.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
54.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
54.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
54.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
54.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
54.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
54.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
54.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
54.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
54.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
53.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
53.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
53.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
53.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
53.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
53.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
53.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
53.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
53.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
52.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
52.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
52.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
52.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
52.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
52.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
52.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
52.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
52.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
52.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
52.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
52.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
52.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
51.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
51.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
51.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
51.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
51.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
51.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
51.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
51.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
51.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
51.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
51.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
50.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
50.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
50.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
50.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
50.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
50.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
50.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
50.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
49.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
49.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
49.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
49.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
49.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
49.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
49.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
49.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
49.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
49.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
49.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
49.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
49.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
49.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
48.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
48.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
48.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
48.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
48.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
48.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
47.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
47.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
47.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
47.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
47.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
47.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
47.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
47.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
47.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
47.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
47.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
47.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
47.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
47.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
47.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
46.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
46.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
46.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
46.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
46.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
46.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
46.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
46.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
46.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
46.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
46.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
46.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
45.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
45.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
45.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
45.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
45.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
45.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
45.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
45.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
45.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
45.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
45.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
45.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
45.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
45.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
45.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
44.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
44.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
44.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
44.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
44.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
44.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
44.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
44.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
44.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
44.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
44.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
44.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
43.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
43.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
43.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
43.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
43.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
43.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
43.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
43.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
43.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
43.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
43.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
43.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
43.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
43.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
43.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
42.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
42.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
42.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
42.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
42.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
42.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
42.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
42.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
42.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
42.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
41.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
41.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
41.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
41.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
41.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
41.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
41.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
41.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
41.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
41.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
41.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
40.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
40.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
40.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
40.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
40.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
40.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
40.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
40.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
40.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
39.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
39.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
39.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
39.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
39.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
39.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
39.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
39.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
39.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
39.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
39.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
39.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
39.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
39.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
39.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
39.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
38.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
38.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
38.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
38.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
38.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
38.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
38.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
38.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
38.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
38.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
38.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
38.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
38.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
38.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
38.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
37.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
37.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
37.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
37.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
37.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
36.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
36.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
36.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
36.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
36.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
36.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
36.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
35.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
35.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
35.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
35.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
35.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
35.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
35.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
35.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
35.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
35.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
35.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
35.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
34.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
34.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
34.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
34.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
34.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
34.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
34.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
34.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
34.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
34.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
34.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
34.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
33.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
33.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
33.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
33.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
33.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
33.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
33.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
33.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
33.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
33.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
33.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
33.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
32.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
32.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
32.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
32.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
32.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
32.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
32.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
32.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
32.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
32.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
32.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
31.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
31.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
31.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
31.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
31.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
31.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
31.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
31.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
30.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
30.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
30.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
30.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
30.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
30.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
29.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
29.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
29.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
29.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
29.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
29.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
29.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
28.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
27.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
27.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
27.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
27.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
26.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
26.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
26.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
25.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
25.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
25.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
24.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
24.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
24.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
24.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
24.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
24.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
23.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
23.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
23.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
23.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
23.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
22.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
22.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
22.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
20.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
20.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
19.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
17.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
17.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
17.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
17.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
12.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPGS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
79.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
78.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
74.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
73.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
70.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
68.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
67.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
63.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
61.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
61.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
61.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
60.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
59.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
58.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
57.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
57.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
57.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
56.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
56.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
56.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
56.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
56.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
53.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
53.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
52.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
52.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
52.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
52.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
49.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
49.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
48.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
48.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
47.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
47.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
46.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
45.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
45.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
45.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
45.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
45.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
45.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
44.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
44.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
44.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
44.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
43.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
43.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
43.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
42.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
42.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
41.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
41.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
41.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
40.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
40.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
40.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
40.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
40.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
37.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
37.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
36.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
36.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
36.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
36.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
33.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
33.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
32.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
31.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
30.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
29.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
29.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
28.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
28.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
27.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
24.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
23.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
19.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPGS2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
142.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
131.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
119.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
113.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
106.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
105.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
104.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
103.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
102.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
94.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
93.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
92.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
92.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
91.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
91.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
91.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
87.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
87.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
86.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
85.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
83.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
82.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
82.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
81.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
81.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
80.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
78.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
76.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
76.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
76.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
75.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
74.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
73.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
72.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
72.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
72.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
72.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
71.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
70.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
70.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
69.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
69.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
69.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
69.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
68.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
67.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
66.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
66.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
66.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
65.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
65.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
64.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
64.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
64.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
63.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
62.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
62.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
62.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
62.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
62.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
62.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
61.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
61.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
60.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
59.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
59.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
59.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
58.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
58.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
58.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
57.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
57.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
57.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
57.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
57.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
57.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
56.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
56.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
55.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
55.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
55.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
55.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
54.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
53.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
53.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
52.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
52.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
52.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
52.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
52.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
51.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
51.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
51.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
51.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
50.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
50.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
50.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
50.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
50.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
49.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
49.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
49.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
49.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
49.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
49.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
48.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
48.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
48.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
48.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
48.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
47.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
47.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
47.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
47.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
46.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
46.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
46.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
46.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
46.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
46.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
45.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
45.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
45.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
45.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
45.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
45.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
45.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
45.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
45.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
44.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
44.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
44.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
44.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
44.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
44.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
43.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
43.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
43.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
43.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
43.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
43.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
43.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
42.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
42.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
42.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
41.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
41.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
41.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
41.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
41.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
41.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
40.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
40.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
40.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
40.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
40.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
40.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
39.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
39.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
39.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
39.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
39.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
38.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
38.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
38.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
37.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
37.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
37.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
37.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
37.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
37.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
37.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
37.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
37.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
37.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
36.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
36.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
35.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
35.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
35.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
35.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
35.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
35.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
35.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
34.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
34.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
34.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
33.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
33.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
33.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
33.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
32.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
32.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
32.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
32.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
31.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
31.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
31.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
31.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
31.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
31.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
31.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
31.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
31.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
31.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
31.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
30.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
30.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
29.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
28.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
28.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
28.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
27.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
26.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
26.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
25.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
24.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
24.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
23.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
23.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
22.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
21.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
21.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
20.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
20.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
19.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
18.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
18.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
17.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
14.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
11.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
