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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELP2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
46.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
37.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
35.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
33.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
33.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
32.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
31.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
31.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
29.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
29.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
29.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
28.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
28.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
28.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
28.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
28.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
27.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
27.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
27.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
26.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
26.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
25.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
24.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
24.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
24.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
24.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
24.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
24.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
24.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
24.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
23.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
23.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
23.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
23.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
23.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
23.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
22.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
22.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
22.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
22.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
21.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
21.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
21.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
21.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
21.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
21.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
21.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
20.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
20.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
20.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
20.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
20.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
20.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
20.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
20.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
20.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
20.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
20.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
20.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
20.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
20.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
19.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
19.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
19.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
19.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
19.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
18.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
18.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
18.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
18.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
18.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
18.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
18.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
18.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
18.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
18.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
18.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
18.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
18.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
18.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
18.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
17.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
17.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
17.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
17.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
17.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
17.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
17.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
17.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
17.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
17.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
16.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
16.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
16.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
16.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
16.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
16.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
16.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
16.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
16.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
16.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
16.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
16.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
15.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
15.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
15.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
15.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
15.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
15.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
15.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
15.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
14.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
14.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
14.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
14.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
14.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
14.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
14.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
14.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
14.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
14.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
13.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
13.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
13.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
13.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
13.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
13.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
13.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
13.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
13.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
13.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
13.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
13.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
13.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
13.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
13.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
12.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
12.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
12.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
12.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
12.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
12.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
12.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
12.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
12.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
11.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
11.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
11.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
11.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
11.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
11.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
10.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
10.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
10.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
10.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
9.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
9.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
9.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
9.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
9.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
9.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
8.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
8.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
8.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
8.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
7.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
7.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
7.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
7.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
6.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
4.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELP2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.3
Number of samples
231
Samples
Sample
Description
TPM
DO50815
0 years, male, NA, stage:3, alive, 150 days
85.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
63.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
60.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
47.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
43.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
40.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
39.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
37.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
37.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
37.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
37.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
36.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
36.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
36.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
36.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
36.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
35.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
35.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
35.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
35.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
34.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
34.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
34.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
33.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
33.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
32.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
31.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
31.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
31.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
31.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
31.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
30.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
30.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
29.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
29.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
28.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
28.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
27.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
27.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
27.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
27.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
27.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
27.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
26.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
26.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
26.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
26.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
26.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
26.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
25.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
25.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
25.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
25.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
25.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
25.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
25.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
25.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
25.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
25.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
25.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
25.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
25.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
25.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
24.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
24.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
24.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
24.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
24.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
24.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
24.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
24.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
24.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
24.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
24.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
24.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
23.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
23.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
23.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
23.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
23.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
23.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
23.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
23.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
23.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
23.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
22.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
22.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
22.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
22.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
22.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
22.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
22.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
22.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
22.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
22.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
22.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
22.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
21.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
21.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
21.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
21.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
21.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
21.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
21.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
21.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
21.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
21.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
21.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
21.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
20.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
20.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
20.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
20.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
20.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
20.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
20.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
20.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
20.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
20.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
20.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
20.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
20.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
19.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
19.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
19.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
19.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
19.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
19.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
19.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
19.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
19.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
19.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
19.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
19.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
19.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
19.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
19.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
19.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
19.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
19.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
18.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
18.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
18.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
18.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
18.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
18.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
18.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
18.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
18.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
18.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
18.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
18.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
17.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
17.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
17.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
17.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
17.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
17.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
17.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
17.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
17.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
17.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
16.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
16.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
16.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
16.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
16.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
16.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
16.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
16.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
16.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
16.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
15.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
15.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
14.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
14.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
14.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
13.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
13.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
12.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
12.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
12.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
12.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
11.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
11.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
11.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
10.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
463
Tumor
0.8
1013
Tumor
0.7
363
Tumor
0.6
391
Tumor
0.6
851
Tumor
0.5
745
Tumor
0.5
147
Tumor
0.5
285
Tumor
0.5
911
Tumor
0.5
1021
Tumor
0.5
951
Tumor
0.5
123
Tumor
0.5
131
Tumor
0.4
727
Tumor
0.4
1043
Tumor
0.4
815
Tumor
0.4
465
Tumor
0.3
313
Tumor
0.3
741
Tumor
0.3
921
Tumor
0.3
983
Tumor
0.3
425
Tumor
0.3
477
Tumor
0.3
981
Tumor
0.3
665
Tumor
0.3
965
Tumor
0.3
221
Tumor
0.3
341
Tumor
0.3
473
Tumor
0.3
314
Normal
0.3
977
Tumor
0.2
353
Tumor
0.2
1026
Normal
0.2
957
Tumor
0.2
367
Tumor
0.2
746
Normal
0.2
312
Normal
0.2
1015
Tumor
0.2
517
Tumor
0.2
298
Normal
0.2
278
Normal
0.2
413
Tumor
0.2
222
Normal
0.2
967
Tumor
0.2
422
Normal
0.2
738
Normal
0.2
661
Tumor
0.2
937
Tumor
0.2
113
Tumor
0.2
332
Normal
0.2
513
Tumor
0.2
227
Tumor
0.2
728
Normal
0.2
257
Tumor
0.2
191
Tumor
0.2
128
Normal
0.2
387
Tumor
0.2
558
Normal
0.1
136
Normal
0.1
952
Normal
0.1
564
Normal
0.1
427
Tumor
0.1
451
Tumor
0.1
1031
Tumor
0.1
571
Tumor
0.1
138
Normal
0.1
715
Tumor
0.1
724
Normal
0.1
186
Normal
0.1
518
Normal
0.1
497
Tumor
0.1
354
Normal
0.1
955
Tumor
0.1
537
Tumor
0.1
474
Normal
0.1
737
Tumor
0.1
228
Normal
0.1
535
Tumor
0.1
218
Normal
0.1
358
Normal
0.1
132
Normal
0.1
1044
Normal
0.1
214
Normal
0.1
975
Tumor
0.1
217
Tumor
0.1
196
Normal
0.1
172
Normal
0.1
526
Normal
0.1
956
Normal
0.1
452
Normal
0.1
617
Tumor
0.1
685
Tumor
0.1
1042
Normal
0.1
663
Tumor
0.1
171
Tumor
0.1
864
Normal
0.1
148
Normal
0.1
1032
Normal
0.1
482
Normal
0.1
568
Normal
0.1
267
Tumor
0.1
572
Normal
0.1
742
Normal
0.1
162
Normal
0.1
464
Normal
0.1
666
Normal
0.1
195
Tumor
0.1
647
Tumor
0.1
861
Tumor
0.1
567
Tumor
0.1
146
Normal
0.1
232
Normal
0.1
286
Normal
0.1
915
Tumor
0.1
351
Tumor
0.0
648
Normal
0.0
1022
Normal
0.0
912
Normal
0.0
874
Normal
0.0
448
Normal
0.0
223
Tumor
0.0
258
Normal
0.0
671
Tumor
0.0
574
Normal
0.0
414
Normal
0.0
141
Tumor
0.0
944
Normal
0.0
976
Normal
0.0
272
Normal
0.0
662
Normal
0.0
698
Normal
0.0
142
Normal
0.0
456
Normal
0.0
882
Normal
0.0
125
Tumor
0.0
515
Tumor
0.0
212
Normal
0.0
331
Tumor
0.0
878
Normal
0.0
284
Normal
0.0
466
Normal
0.0
364
Normal
0.0
416
Normal
0.0
627
Tumor
0.0
925
Tumor
0.0
514
Normal
0.0
428
Normal
0.0
494
Normal
0.0
1016
Normal
0.0
966
Normal
0.0
277
Tumor
0.0
618
Normal
0.0
914
Normal
0.0
713
Tumor
0.0
523
Tumor
0.0
824
Normal
0.0
642
Normal
0.0
968
Normal
0.0
982
Normal
0.0
432
Normal
0.0
938
Normal
0.0
472
Normal
0.0
1045
Tumor
0.0
862
Normal
0.0
262
Normal
0.0
127
Tumor
0.0
435
Tumor
0.0
484
Normal
0.0
958
Normal
0.0
192
Normal
0.0
533
Tumor
0.0
268
Normal
0.0
1046
Normal
0.0
462
Normal
0.0
1028
Normal
0.0
124
Normal
0.0
943
Tumor
0.0
722
Normal
0.0
858
Normal
0.0
468
Normal
0.0
866
Normal
0.0
527
Tumor
-0.1
137
Tumor
-0.1
492
Normal
-0.1
1025
Tumor
-0.1
696
Normal
-0.1
487
Tumor
-0.1
145
Tumor
-0.1
114
Normal
-0.1
426
Normal
-0.1
778
Normal
-0.1
488
Normal
-0.1
816
Normal
-0.1
546
Normal
-0.1
716
Normal
-0.1
926
Normal
-0.1
777
Tumor
-0.1
467
Tumor
-0.1
231
Tumor
-0.1
852
Normal
-0.1
964
Normal
-0.1
817
Tumor
-0.1
424
Normal
-0.1
924
Normal
-0.1
483
Tumor
-0.1
873
Tumor
-0.1
616
Normal
-0.1
356
Normal
-0.1
393
Tumor
-0.1
395
Tumor
-0.1
224
Normal
-0.1
744
Normal
-0.1
392
Normal
-0.1
922
Normal
-0.1
628
Normal
-0.1
664
Normal
-0.1
423
Tumor
-0.1
436
Normal
-0.1
714
Normal
-0.1
756
Normal
-0.1
126
Normal
-0.1
516
Normal
-0.1
327
Tumor
-0.1
865
Tumor
-0.1
953
Tumor
-0.1
554
Normal
-0.1
545
Tumor
-0.1
557
Tumor
-0.1
918
Normal
-0.1
498
Normal
-0.1
695
Tumor
-0.1
447
Tumor
-0.1
357
Tumor
-0.1
386
Normal
-0.1
868
Normal
-0.1
1041
Tumor
-0.1
538
Normal
-0.1
342
Normal
-0.1
963
Tumor
-0.1
984
Normal
-0.1
493
Tumor
-0.1
421
Tumor
-0.1
1014
Normal
-0.1
388
Normal
-0.1
573
Tumor
-0.1
755
Tumor
-0.1
884
Normal
-0.1
867
Tumor
-0.1
672
Normal
-0.1
111
Normal
-0.2
818
Normal
-0.2
352
Normal
-0.2
524
Normal
-0.2
343
Tumor
-0.2
563
Tumor
-0.2
917
Tumor
-0.2
328
Normal
-0.2
376
Normal
-0.2
478
Normal
-0.2
431
Tumor
-0.2
913
Tumor
-0.2
481
Tumor
-0.2
366
Normal
-0.2
743
Tumor
-0.2
534
Normal
-0.2
396
Normal
-0.2
185
Tumor
-0.2
491
Tumor
-0.2
394
Normal
-0.2
636
Normal
-0.2
188
Normal
-0.2
383
Tumor
-0.2
213
Tumor
-0.2
536
Normal
-0.2
923
Tumor
-0.2
344
Normal
-0.2
271
Tumor
-0.2
187
Tumor
-0.2
528
Normal
-0.2
411
Tumor
-0.2
1027
Tumor
-0.2
455
Tumor
-0.2
723
Tumor
-0.2
881
Tumor
-0.2
978
Normal
-0.2
355
Tumor
-0.2
525
Tumor
-0.2
415
Tumor
-0.2
261
Tumor
-0.2
686
Normal
-0.2
446
Normal
-0.2
362
Normal
-0.2
385
Tumor
-0.2
412
Normal
-0.2
877
Tumor
-0.2
365
Tumor
-0.2
697
Tumor
-0.3
954
Normal
-0.3
721
Tumor
-0.3
786
Normal
-0.3
553
Tumor
-0.3
283
Tumor
-0.3
883
Tumor
-0.3
297
Tumor
-0.3
916
Normal
-0.3
445
Tumor
-0.3
311
Tumor
-0.3
375
Tumor
-0.3
135
Tumor
-0.3
368
Normal
-0.3
461
Tumor
-0.3
615
Tumor
-0.3
112
Tumor
-0.3
635
Tumor
-0.3
433
Tumor
-0.3
434
Normal
-0.3
863
Tumor
-0.3
857
Tumor
-0.3
161
Tumor
-0.4
443
Tumor
-0.4
785
Tumor
-0.4
641
Tumor
-0.4
813
Tumor
-0.4
211
Tumor
-0.4
384
Normal
-0.4
361
Tumor
-0.4
444
Normal
-0.5
471
Tumor
-0.5
823
Tumor
-0.5
814
Normal
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
