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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EMC7 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
95.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
158.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
158.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
150.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
149.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
138.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
130.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
129.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
128.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
123.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
122.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
122.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
121.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
120.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
119.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
114.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
114.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
114.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
113.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
110.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
109.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
107.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
107.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
105.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
105.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
105.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
104.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
104.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
104.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
103.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
102.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
99.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
99.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
91.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
91.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
91.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
91.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
90.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
90.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
89.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
89.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
88.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
82.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
81.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
78.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
78.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
76.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
74.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
73.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
71.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
71.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
70.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
69.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
66.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
64.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
63.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
63.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
62.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
59.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
57.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
54.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
49.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
47.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
46.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EMC7 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
83.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
155.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
154.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
147.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
147.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
146.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
145.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
142.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
139.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
137.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
136.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
135.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
134.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
133.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
133.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
130.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
130.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
128.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
123.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
122.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
122.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
121.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
120.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
120.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
120.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
120.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
119.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
119.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
119.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
119.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
118.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
117.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
117.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
117.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
117.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
117.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
116.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
114.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
114.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
114.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
114.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
114.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
113.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
113.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
112.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
111.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
111.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
111.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
109.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
108.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
108.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
107.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
107.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
107.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
107.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
107.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
107.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
106.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
106.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
106.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
106.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
106.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
105.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
105.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
105.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
104.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
104.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
104.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
104.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
104.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
103.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
102.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
102.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
102.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
101.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
101.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
101.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
101.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
101.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
100.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
100.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
100.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
99.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
99.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
99.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
99.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
99.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
99.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
99.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
99.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
99.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
99.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
99.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
98.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
98.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
98.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
98.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
98.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
97.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
97.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
97.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
97.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
97.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
96.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
96.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
96.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
96.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
96.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
96.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
96.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
96.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
95.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
95.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
95.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
95.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
95.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
95.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
95.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
95.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
95.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
95.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
95.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
95.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
94.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
94.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
94.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
94.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
94.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
94.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
94.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
94.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
93.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
93.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
93.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
93.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
93.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
93.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
93.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
92.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
92.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
92.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
92.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
92.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
92.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
92.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
92.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
92.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
92.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
91.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
91.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
91.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
91.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
91.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
91.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
91.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
91.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
91.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
91.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
91.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
90.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
90.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
90.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
90.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
90.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
90.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
90.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
90.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
90.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
90.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
90.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
90.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
89.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
89.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
89.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
89.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
89.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
89.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
89.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
89.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
89.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
89.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
89.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
89.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
89.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
89.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
88.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
88.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
88.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
88.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
88.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
87.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
87.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
87.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
87.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
87.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
87.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
87.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
87.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
87.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
87.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
86.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
86.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
86.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
86.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
86.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
86.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
86.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
86.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
86.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
86.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
85.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
85.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
85.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
85.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
85.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
85.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
85.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
85.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
85.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
85.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
85.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
85.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
85.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
85.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
85.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
85.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
84.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
84.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
84.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
84.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
84.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
84.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
84.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
84.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
83.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
83.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
83.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
83.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
83.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
83.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
83.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
83.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
83.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
83.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
83.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
83.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
83.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
83.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
82.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
82.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
82.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
82.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
82.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
82.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
82.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
82.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
82.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
82.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
81.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
81.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
81.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
81.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
81.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
81.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
81.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
81.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
81.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
81.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
81.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
80.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
80.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
80.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
80.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
80.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
80.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
80.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
80.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
80.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
80.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
80.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
79.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
79.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
79.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
79.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
79.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
79.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
79.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
79.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
78.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
78.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
78.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
78.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
78.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
78.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
78.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
78.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
78.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
78.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
78.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
78.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
78.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
78.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
78.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
78.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
78.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
77.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
77.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
77.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
77.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
77.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
77.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
77.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
77.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
77.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
77.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
77.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
77.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
77.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
77.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
77.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
77.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
76.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
76.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
76.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
76.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
76.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
76.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
76.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
76.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
76.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
76.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
75.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
75.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
75.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
75.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
75.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
75.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
75.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
75.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
75.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
75.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
75.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
75.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
75.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
75.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
74.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
74.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
74.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
74.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
74.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
74.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
74.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
74.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
74.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
74.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
73.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
73.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
73.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
73.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
73.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
73.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
73.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
73.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
73.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
73.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
73.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
73.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
73.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
73.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
72.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
72.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
72.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
72.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
72.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
72.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
72.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
71.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
71.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
71.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
71.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
71.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
71.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
71.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
71.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
71.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
70.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
70.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
70.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
70.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
70.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
70.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
70.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
70.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
70.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
70.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
69.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
69.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
69.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
69.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
69.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
69.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
68.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
68.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
68.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
68.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
68.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
68.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
68.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
67.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
67.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
67.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
67.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
67.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
67.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
67.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
67.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
67.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
66.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
66.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
66.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
66.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
66.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
66.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
66.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
66.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
66.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
65.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
65.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
65.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
65.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
65.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
65.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
64.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
64.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
64.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
64.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
64.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
63.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
63.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
63.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
63.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
63.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
63.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
63.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
62.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
62.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
62.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
62.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
62.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
62.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
62.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
61.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
61.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
61.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
61.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
60.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
60.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
60.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
60.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
60.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
60.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
60.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
59.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
59.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
59.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
59.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
58.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
58.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
58.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
58.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
58.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
58.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
58.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
57.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
57.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
57.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
57.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
57.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
57.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
57.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
56.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
56.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
56.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
56.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
55.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
55.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
55.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
54.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
54.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
53.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
53.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
53.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
52.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
51.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
51.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
51.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
51.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
49.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
49.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
48.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
48.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
48.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
48.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
48.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
47.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
47.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
46.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
46.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
45.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
45.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
45.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
44.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
44.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
43.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
42.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
41.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
39.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
37.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EMC7 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
140.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
137.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
131.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
131.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
130.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
121.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
120.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
120.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
120.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
120.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
114.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
112.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
111.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
111.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
110.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
108.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
108.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
108.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
105.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
105.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
104.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
104.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
103.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
102.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
102.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
102.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
101.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
101.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
100.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
99.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
99.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
98.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
98.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
97.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
97.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
95.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
95.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
95.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
93.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
92.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
92.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
92.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
91.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
91.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
91.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
91.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
89.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
89.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
89.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
89.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
88.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
88.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
87.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
87.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
87.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
86.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
86.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
85.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
84.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
84.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
84.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
84.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
83.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
83.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
83.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
83.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
83.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
82.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
82.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
82.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
82.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
81.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
81.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
81.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
80.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
80.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
80.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
79.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
78.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
78.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
78.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
78.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
76.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
76.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
76.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
74.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
73.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
72.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
72.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
69.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
67.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
66.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
62.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
62.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
57.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
55.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
48.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
47.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
46.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EMC7 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
95.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
216.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
200.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
172.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
172.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
169.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
166.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
157.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
156.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
153.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
149.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
148.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
148.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
147.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
146.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
144.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
141.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
140.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
139.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
139.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
139.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
138.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
137.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
136.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
135.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
135.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
134.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
134.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
133.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
132.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
132.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
132.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
131.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
130.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
129.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
128.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
127.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
127.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
126.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
125.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
125.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
125.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
125.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
123.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
123.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
122.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
122.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
122.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
121.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
121.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
121.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
121.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
119.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
119.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
119.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
119.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
119.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
118.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
118.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
118.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
118.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
117.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
117.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
116.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
116.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
115.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
115.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
115.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
115.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
115.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
115.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
115.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
114.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
114.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
113.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
113.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
113.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
113.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
112.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
112.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
111.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
111.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
111.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
110.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
110.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
110.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
110.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
110.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
109.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
109.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
109.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
109.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
109.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
109.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
108.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
107.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
107.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
106.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
106.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
105.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
105.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
105.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
105.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
105.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
104.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
104.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
104.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
103.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
102.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
102.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
102.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
102.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
102.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
102.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
101.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
101.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
101.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
101.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
101.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
100.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
99.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
99.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
99.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
99.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
99.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
99.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
99.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
98.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
98.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
98.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
98.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
98.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
97.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
97.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
96.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
96.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
96.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
95.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
95.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
95.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
95.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
94.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
94.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
94.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
94.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
94.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
94.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
94.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
93.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
93.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
93.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
93.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
92.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
92.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
92.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
92.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
92.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
92.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
92.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
92.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
92.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
91.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
90.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
90.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
90.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
90.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
90.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
90.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
90.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
90.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
89.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
89.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
89.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
88.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
88.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
87.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
87.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
87.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
87.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
86.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
86.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
85.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
85.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
84.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
84.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
84.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
83.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
83.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
83.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
83.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
82.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
82.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
81.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
81.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
81.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
81.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
80.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
80.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
80.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
79.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
79.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
78.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
77.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
77.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
77.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
77.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
77.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
76.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
75.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
75.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
75.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
75.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
75.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
75.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
75.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
75.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
74.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
74.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
74.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
73.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
73.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
73.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
73.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
72.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
72.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
72.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
72.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
70.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
70.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
70.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
69.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
69.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
69.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
69.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
68.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
68.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
67.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
67.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
67.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
67.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
66.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
66.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
66.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
65.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
64.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
64.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
63.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
63.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
62.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
61.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
61.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
59.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
58.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
57.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
57.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
57.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
56.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
56.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
55.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
54.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
54.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
54.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
53.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
53.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
53.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
52.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
51.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
50.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
49.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
48.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
46.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
44.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
44.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
42.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
40.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
39.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
38.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
37.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
37.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
28.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
23.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
20.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.2
CPT0078660003
Tumor
0.7
CPT0065450001
Normal
0.5
CPT0023350003
Tumor
0.5
CPT0026420001
Normal
0.5
CPT0000790001
Normal
0.5
CPT0006950001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0012180003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0023360001
Normal
0.4
CPT0069160003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0066430001
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0010170001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0088780001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0023690003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0081620001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0000890001
Normal
0.2
CPT0078840001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0012290003
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0075560003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0076350001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0024680001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0078990003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0079410003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0088900003
Tumor
-0.4
CPT0018250001
Normal
-0.4
CPT0012080003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0014450004
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0006630003
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0026410003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0009000003
Tumor
-0.5
CPT0071150004
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0000780007
Tumor
-0.7
CPT0009060003
Tumor
-0.7
CPT0009080003
Normal
-0.8
CPT0012920003
Normal
-0.8
CPT0012900004
Tumor
-0.9
CPT0017410003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
