HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:18.6 nTPM
HPA Brain:37.3 nTPM
GTEx:18.6 nTPM
FANTOM5:72.5 Scaled Tags Per Million
Pig:27.3 nTPM
Mouse:27.6 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011478
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.1
2148 Female, age 91, left hemisphere 37.3
1855 Male, age 76, left hemisphere 36.8
2529 Female, age 94, left hemisphere 34.2
2621 Female, age 67, right hemisphere 33.9
1911 Female, age 85, right hemisphere 31.9
1898 Male, age 80, left hemisphere 30.7
Dentate gyrus
nTPM: 33.6
2010 Male, age 76, both hemispheres 36.7
2530 Female, age 94, left hemisphere 35.1
1927 Female, age 91, both hemispheres 34.2
2531 Female, age 67, both hemispheres 32.2
2528 Male, age 74, both hemispheres 31.8
2246 Female, age 85, both hemispheres 31.7
Entorhinal gyrus
nTPM: 32.1
1938 Female, age 85, left hemisphere 34.4
1787 Male, age 76, left hemisphere 33.4
2613 Female, age 94, left hemisphere 32.5
2764 Male, age 80, right hemisphere 31.1
2686 Male, age 75, right hemisphere 31.0
2117 Female, age 91, right hemisphere 30.5
Hippocampus, CA1
nTPM: 37.3
2749 Male, age 80, left hemisphere 47.4
2045 Male, age 76, both hemispheres 43.4
1873 Female, age 85, both hemispheres 34.2
2527 Male, age 74, both hemispheres 32.4
2082 Female, age 91, right hemisphere 29.2
Hippocampus, CA2
nTPM: 31.4
1892 Male, age 76, both hemispheres 38.7
2437 Female, age 94, left hemisphere 31.9
1963 Male, age 80, left hemisphere 31.8
2113 Female, age 91, right hemisphere 29.7
2249 Male, age 74, both hemispheres 28.7
1940 Female, age 85, left hemisphere 27.6
Hippocampus, CA3
nTPM: 37.1
2137 Male, age 80, left hemisphere 48.4
1867 Male, age 76, both hemispheres 42.0
2620 Female, age 94, left hemisphere 36.1
2861 Female, age 67, both hemispheres 34.3
1891 Female, age 85, both hemispheres 31.0
2436 Male, age 74, both hemispheres 31.0
Parahippocampal cortex
nTPM: 33.7
2692 Male, age 74, both hemispheres 40.0
2622 Female, age 67, right hemisphere 37.5
2018 Male, age 76, both hemispheres 36.6
2245 Female, age 91, both hemispheres 34.3
2250 Female, age 67, right hemisphere 33.0
1990 Female, age 91, right hemisphere 32.4
2532 Female, age 72, left hemisphere 32.4
1850 Male, age 80, both hemispheres 31.3
1933 Female, age 85, both hemispheres 30.0
2693 Female, age 94, both hemispheres 29.4
Perirhinal gyrus
nTPM: 31.4
1847 Female, age 91, left hemisphere 35.5
1841 Female, age 85, right hemisphere 32.1
2521 Female, age 94, right hemisphere 30.9
2848 Male, age 76, right hemisphere 29.7
1794 Male, age 80, right hemisphere 28.9
Subiculum
nTPM: 34.9
2619 Male, age 74, both hemispheres 39.8
2042 Male, age 76, both hemispheres 35.9
2438 Female, age 94, left hemisphere 35.5
2729 Female, age 91, right hemisphere 35.4
1901 Male, age 80, both hemispheres 32.3
1977 Female, age 85, both hemispheres 30.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.6
Samples: 197

Max nTPM: 28.9
Min nTPM: 12.3
Std nTPM: 2.6
Median nTPM: 18.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 28.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 27.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 26.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 26.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 24.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 24.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 24.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 23.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 23.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 23.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 22.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 72.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.5
FF:10169-103B7 60 years, female 78.9
FF:10153-102I9 76 years, female 66.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.3
Pig sample Sample description nTPM
Subiculum
nTPM: 24.1
Samples: 4

Max nTPM: 28.1
Min nTPM: 21.8
Sample A Female 28.1
Sample B Female 22.2
Sample C Male 21.8
Sample D Male 24.2
Dorsal hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 27.4
Min nTPM: 16.9
Sample A Female 27.4
Sample B Female 22.1
Sample C Male 21.9
Sample D Male 16.9
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 28.5
Min nTPM: 24.1
Sample A Female 28.5
Sample B Female 28.3
Sample C Male 24.1
Sample D Male 28.2
Ventral hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 24.5
Min nTPM: 17.4
Sample A Female 23.8
Sample B Female 17.4
Sample C Male 23.0
Sample D Male 24.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 31.5
Min nTPM: 25.6
Sample A Male 26.4
Sample B Male 31.5
Sample C Female 25.6
Sample D Female 27.0
Hippocampal formation
nTPM: 19.0
Samples: 4

Max nTPM: 21.3
Min nTPM: 17.4
Sample A Male 18.0
Sample B Male 17.4
Sample C Female 19.1
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69095946 Antisense, RP_050324_02_D07, Mouse strain C57BL/6J (56 days, male) 3.9

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