HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.6 nTPM
HPA Brain:183.2 nTPM
GTEx:27.6 nTPM
FANTOM5:188.7 Scaled Tags Per Million
Pig:115.5 nTPM
Mouse:224.1 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030437Antibody HPA039895Antibody HPA040438
Glial cells Not detectedNot detectedLow
Neuronal cells LowLowMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 183.2
Sample id Sample description nTPM
Hippocampus
nTPM: 120.9
2148 Female, age 91, left hemisphere 148.7
2621 Female, age 67, right hemisphere 134.6
1855 Male, age 76, left hemisphere 133.0
1898 Male, age 80, left hemisphere 125.9
1911 Female, age 85, right hemisphere 118.2
2529 Female, age 94, left hemisphere 64.8
Dentate gyrus
nTPM: 130.7
1927 Female, age 91, both hemispheres 186.9
2531 Female, age 67, both hemispheres 173.7
2010 Male, age 76, both hemispheres 129.0
2246 Female, age 85, both hemispheres 108.9
2530 Female, age 94, left hemisphere 97.9
2528 Male, age 74, both hemispheres 88.2
Entorhinal gyrus
nTPM: 110.3
2613 Female, age 94, left hemisphere 142.9
2764 Male, age 80, right hemisphere 129.6
2686 Male, age 75, right hemisphere 113.0
1938 Female, age 85, left hemisphere 110.5
1787 Male, age 76, left hemisphere 87.4
2117 Female, age 91, right hemisphere 78.5
Hippocampus, CA1
nTPM: 171.7
2749 Male, age 80, left hemisphere 305.7
2045 Male, age 76, both hemispheres 176.6
2082 Female, age 91, right hemisphere 136.8
1873 Female, age 85, both hemispheres 129.3
2527 Male, age 74, both hemispheres 110.3
Hippocampus, CA2
nTPM: 123.1
1892 Male, age 76, both hemispheres 157.9
1963 Male, age 80, left hemisphere 153.1
1940 Female, age 85, left hemisphere 127.9
2113 Female, age 91, right hemisphere 111.8
2249 Male, age 74, both hemispheres 100.4
2437 Female, age 94, left hemisphere 87.7
Hippocampus, CA3
nTPM: 183.2
2137 Male, age 80, left hemisphere 291.4
2620 Female, age 94, left hemisphere 201.2
2436 Male, age 74, both hemispheres 197.6
1867 Male, age 76, both hemispheres 154.7
2861 Female, age 67, both hemispheres 154.2
1891 Female, age 85, both hemispheres 99.8
Parahippocampal cortex
nTPM: 115.9
2693 Female, age 94, both hemispheres 148.3
2245 Female, age 91, both hemispheres 140.9
1850 Male, age 80, both hemispheres 130.4
2622 Female, age 67, right hemisphere 128.0
2532 Female, age 72, left hemisphere 127.3
2018 Male, age 76, both hemispheres 121.7
1933 Female, age 85, both hemispheres 104.5
1990 Female, age 91, right hemisphere 102.6
2250 Female, age 67, right hemisphere 88.7
2692 Male, age 74, both hemispheres 67.2
Perirhinal gyrus
nTPM: 131.4
2521 Female, age 94, right hemisphere 152.9
1794 Male, age 80, right hemisphere 142.4
1847 Female, age 91, left hemisphere 134.5
1841 Female, age 85, right hemisphere 120.6
2848 Male, age 76, right hemisphere 106.7
Subiculum
nTPM: 106.1
1901 Male, age 80, both hemispheres 157.3
2729 Female, age 91, right hemisphere 127.9
2042 Male, age 76, both hemispheres 108.3
1977 Female, age 85, both hemispheres 98.1
2438 Female, age 94, left hemisphere 77.2
2619 Male, age 74, both hemispheres 67.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 27.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.6
Samples: 197

Max nTPM: 92.9
Min nTPM: 1.2
Std nTPM: 21.1
Median nTPM: 23.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 92.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 89.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 81.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 75.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 75.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 73.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 72.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 70.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 69.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 68.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 66.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 188.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 188.7
FF:10169-103B7 60 years, female 274.1
FF:10153-102I9 76 years, female 103.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 115.5
Pig sample Sample description nTPM
Subiculum
nTPM: 50.3
Samples: 4

Max nTPM: 76.3
Min nTPM: 38.2
Sample A Female 76.3
Sample B Female 44.6
Sample C Male 38.2
Sample D Male 42.2
Dorsal hippocampus
nTPM: 115.5
Samples: 4

Max nTPM: 151.2
Min nTPM: 80.1
Sample A Female 151.2
Sample B Female 128.7
Sample C Male 101.9
Sample D Male 80.1
Entorhinal cortex
nTPM: 90.0
Samples: 4

Max nTPM: 99.1
Min nTPM: 77.7
Sample A Female 99.1
Sample B Female 95.5
Sample C Male 77.7
Sample D Male 87.6
Ventral hippocampus
nTPM: 82.3
Samples: 4

Max nTPM: 175.0
Min nTPM: 43.3
Sample A Female 58.4
Sample B Female 43.3
Sample C Male 52.4
Sample D Male 175.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 224.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 146.2
Samples: 4

Max nTPM: 158.0
Min nTPM: 123.5
Sample A Male 156.1
Sample B Male 147.0
Sample C Female 158.0
Sample D Female 123.5
Hippocampal formation
nTPM: 224.1
Samples: 4

Max nTPM: 264.6
Min nTPM: 184.7
Sample A Male 184.7
Sample B Male 249.9
Sample C Female 264.6
Sample D Female 197.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
71249740 Antisense, RP_050414_04_A03, Mouse strain C57BL/6J (56 days, male) 20.2
69443397 Antisense, RP_050414_04_A03, Mouse strain C57BL/6J (56 days, male) 18.3
70305198 Antisense, RP_050609_03_E02, Mouse strain C57BL/6J (56 days, male) 3.8
68410566 Antisense, RP_041214_02_B08, Mouse strain C57BL/6J (56 days, male) 1.5

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