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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IPO8 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
65.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
65.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
54.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
41.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
41.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
38.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
38.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
37.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
35.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
35.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
34.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
33.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
32.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
32.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
31.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
30.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
29.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
29.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
28.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
27.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
22.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
22.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
19.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
19.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
19.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
17.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
15.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
15.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
11.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
9.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IPO8 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
49.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
45.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
45.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
44.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
44.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
44.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
43.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
43.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
42.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
42.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
41.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
40.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
40.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
40.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
40.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
40.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
39.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
39.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
39.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
39.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
39.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
38.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
38.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
37.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
37.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
37.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
37.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
37.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
36.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
36.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
36.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
35.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
35.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
35.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
35.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
35.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
35.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
35.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
35.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
34.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
34.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
34.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
34.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
34.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
34.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
34.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
34.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
33.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
33.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
33.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
33.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
33.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
33.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
33.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
33.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
32.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
32.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
32.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
32.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
32.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
32.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
31.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
31.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
31.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
31.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
31.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
31.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
31.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
31.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
31.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
30.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
30.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
30.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
30.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
30.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
30.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
30.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
30.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
30.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
30.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
29.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
29.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
29.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
29.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
29.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
29.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
29.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
29.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
29.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
29.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
29.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
29.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
28.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
28.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
28.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
28.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
28.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
28.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
28.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
28.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
27.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
27.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
27.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
27.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
27.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
27.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
27.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
27.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
27.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
27.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
27.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
27.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
26.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
26.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
26.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
26.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
26.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
26.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
26.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
26.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
25.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
25.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
25.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
25.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
25.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
24.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
24.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
24.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
24.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
24.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
24.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
24.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
24.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
24.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
23.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
23.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
23.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
23.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
23.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
23.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
23.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
22.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
22.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
22.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
21.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
21.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
21.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
21.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
21.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
21.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
20.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
20.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
20.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
20.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
19.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
18.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
18.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
18.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
18.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
18.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
18.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
17.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
16.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
15.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
14.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IPO8 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
53.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
48.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
46.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
42.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
41.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
40.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
39.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
39.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
39.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
38.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
38.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
38.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
37.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
36.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
35.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
35.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
35.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
35.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
34.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
34.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
34.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
34.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
34.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
33.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
32.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
32.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
32.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
31.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
31.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
31.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
31.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
30.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
30.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
30.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
30.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
29.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
28.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
27.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
25.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
25.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
25.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
24.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
20.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
19.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
16.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
13.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
11.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IPO8 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
58.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
53.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
53.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
48.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
41.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
41.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
41.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
39.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
39.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
37.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
37.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
36.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
35.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
35.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
33.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
32.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
32.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
32.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
32.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
31.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
31.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
30.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
30.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
30.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
30.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
29.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
29.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
29.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
29.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
28.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
27.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
26.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
26.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
26.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
26.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
26.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
25.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
25.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
25.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
24.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
24.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
23.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
23.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
23.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
22.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
21.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
21.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
20.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
20.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
20.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
18.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
17.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
17.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
17.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
17.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
15.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
14.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
13.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
13.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
12.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
10.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
6.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
2.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.2
CPT0078510003
Tumor
0.9
CPT0078660003
Tumor
0.9
CPT0014450004
Tumor
0.7
CPT0066470004
Tumor
0.7
CPT0024670003
Tumor
0.6
CPT0019990003
Tumor
0.6
CPT0011410003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0012180003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0077110003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0001340003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0065430003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0065930003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0012370003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0001550001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0017450001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0000890001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0014470001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0065690003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0025110003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0071150004
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
