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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM254 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
29.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
23.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
17.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
16.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
16.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
16.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
14.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
12.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
12.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM254 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
24.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
23.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
23.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
21.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
20.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
19.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
19.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
17.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
17.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
16.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
16.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
16.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
14.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
13.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
13.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
12.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
11.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
10.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
10.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
10.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
10.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
10.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
9.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
9.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
9.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
9.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
9.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
9.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
9.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
9.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
9.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
9.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
9.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
8.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
8.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
8.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
8.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
8.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
7.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
7.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
7.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
7.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
7.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
7.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
7.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
7.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
7.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
7.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
7.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
7.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
7.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
7.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
7.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
7.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
7.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
7.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
6.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
6.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
6.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
6.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
6.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
6.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
6.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
6.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
6.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
6.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
6.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
6.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
6.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
5.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
5.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
5.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
5.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
5.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
5.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
5.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
5.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
5.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
5.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
5.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
5.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
5.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
4.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
4.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
4.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
4.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
4.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
4.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
4.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
4.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
4.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
3.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
3.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
3.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
3.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
3.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
3.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
2.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
2.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
2.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
1.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM254 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
29.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
26.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
21.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
19.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
19.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
17.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
17.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
14.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
14.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
13.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
12.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
11.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
11.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
10.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
10.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
10.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
9.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
9.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
9.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
8.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
8.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
8.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
6.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
6.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
4.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
3.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
3.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM254 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
53.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
52.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
48.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
37.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
34.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
34.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
33.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
33.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
29.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
28.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
27.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
25.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
25.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
25.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
25.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
25.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
25.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
24.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
24.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
24.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
24.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
23.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
23.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
22.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
22.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
20.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
20.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
19.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
19.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
19.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
19.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
18.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
17.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
17.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
17.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
16.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
12.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
11.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
11.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
5.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
5.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
4.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
2.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
