HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.1 nTPM
HPA Brain:125.5 nTPM
GTEx:19.1 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:76.7 nTPM
Mouse:103.0 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 125.5
Sample id Sample description nTPM
Hippocampus
nTPM: 93.4
2621 Female, age 67, right hemisphere 105.8
2148 Female, age 91, left hemisphere 103.2
1855 Male, age 76, left hemisphere 99.3
1898 Male, age 80, left hemisphere 92.1
1911 Female, age 85, right hemisphere 92.0
2529 Female, age 94, left hemisphere 67.8
Dentate gyrus
nTPM: 93.9
2531 Female, age 67, both hemispheres 129.3
1927 Female, age 91, both hemispheres 120.8
2010 Male, age 76, both hemispheres 93.0
2528 Male, age 74, both hemispheres 79.8
2246 Female, age 85, both hemispheres 73.1
2530 Female, age 94, left hemisphere 67.5
Entorhinal gyrus
nTPM: 82.6
2613 Female, age 94, left hemisphere 110.4
2764 Male, age 80, right hemisphere 107.7
1938 Female, age 85, left hemisphere 80.4
1787 Male, age 76, left hemisphere 79.2
2686 Male, age 75, right hemisphere 67.9
2117 Female, age 91, right hemisphere 49.8
Hippocampus, CA1
nTPM: 118.2
2749 Male, age 80, left hemisphere 217.6
2045 Male, age 76, both hemispheres 128.9
1873 Female, age 85, both hemispheres 95.8
2527 Male, age 74, both hemispheres 90.1
2082 Female, age 91, right hemisphere 58.8
Hippocampus, CA2
nTPM: 81.1
1963 Male, age 80, left hemisphere 115.1
1892 Male, age 76, both hemispheres 105.1
2249 Male, age 74, both hemispheres 75.0
2113 Female, age 91, right hemisphere 70.7
2437 Female, age 94, left hemisphere 60.4
1940 Female, age 85, left hemisphere 60.1
Hippocampus, CA3
nTPM: 125.5
2137 Male, age 80, left hemisphere 206.3
2620 Female, age 94, left hemisphere 139.3
2861 Female, age 67, both hemispheres 126.7
1867 Male, age 76, both hemispheres 109.8
2436 Male, age 74, both hemispheres 98.5
1891 Female, age 85, both hemispheres 72.6
Parahippocampal cortex
nTPM: 77.5
2245 Female, age 91, both hemispheres 99.5
2018 Male, age 76, both hemispheres 90.7
1850 Male, age 80, both hemispheres 88.2
2532 Female, age 72, left hemisphere 82.8
1933 Female, age 85, both hemispheres 80.9
2622 Female, age 67, right hemisphere 72.6
2693 Female, age 94, both hemispheres 71.8
1990 Female, age 91, right hemisphere 69.3
2250 Female, age 67, right hemisphere 63.6
2692 Male, age 74, both hemispheres 55.7
Perirhinal gyrus
nTPM: 85.6
1847 Female, age 91, left hemisphere 97.9
1794 Male, age 80, right hemisphere 89.7
2848 Male, age 76, right hemisphere 89.4
2521 Female, age 94, right hemisphere 77.9
1841 Female, age 85, right hemisphere 72.8
Subiculum
nTPM: 71.9
1901 Male, age 80, both hemispheres 100.4
2042 Male, age 76, both hemispheres 82.4
2729 Female, age 91, right hemisphere 76.4
1977 Female, age 85, both hemispheres 73.4
2619 Male, age 74, both hemispheres 50.4
2438 Female, age 94, left hemisphere 48.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 58.7
Min nTPM: 3.6
Std nTPM: 10.9
Median nTPM: 17.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 58.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 48.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 47.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 45.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 43.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 42.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 40.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 40.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 39.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 39.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10169-103B7 60 years, female 0.0
FF:10153-102I9 76 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 76.7
Pig sample Sample description nTPM
Subiculum
nTPM: 55.6
Samples: 4

Max nTPM: 61.2
Min nTPM: 49.9
Sample A Female 58.5
Sample B Female 49.9
Sample C Male 52.8
Sample D Male 61.2
Dorsal hippocampus
nTPM: 76.7
Samples: 4

Max nTPM: 93.7
Min nTPM: 51.6
Sample A Female 93.7
Sample B Female 93.7
Sample C Male 51.6
Sample D Male 67.8
Entorhinal cortex
nTPM: 59.6
Samples: 4

Max nTPM: 74.6
Min nTPM: 51.3
Sample A Female 60.8
Sample B Female 51.3
Sample C Male 74.6
Sample D Male 51.8
Ventral hippocampus
nTPM: 71.4
Samples: 4

Max nTPM: 95.3
Min nTPM: 47.1
Sample A Female 64.0
Sample B Female 47.1
Sample C Male 79.3
Sample D Male 95.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 103.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.9
Samples: 4

Max nTPM: 105.4
Min nTPM: 75.5
Sample A Male 75.7
Sample B Male 75.5
Sample C Female 78.8
Sample D Female 105.4
Hippocampal formation
nTPM: 103.0
Samples: 4

Max nTPM: 131.7
Min nTPM: 84.6
Sample A Male 90.8
Sample B Male 105.0
Sample C Female 131.7
Sample D Female 84.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
71670483 Antisense, RP_050503_04_A10, Mouse strain C57BL/6J (56 days, male) 10.2
69736040 Antisense, RP_050503_04_A10, Mouse strain C57BL/6J (56 days, male) 9.2

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