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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OSER1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
86.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
74.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
66.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
57.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
54.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
50.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
50.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
49.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
46.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
45.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
44.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
43.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
43.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
42.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
41.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
41.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
40.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
39.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
39.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
39.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
38.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
37.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
36.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
35.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
35.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
34.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
33.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
33.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
32.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
31.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
30.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
30.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
30.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
30.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
30.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
29.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
28.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
27.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
26.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
26.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
25.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
24.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
24.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
24.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
22.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
22.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
21.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
21.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
19.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
18.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
15.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OSER1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
100.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
84.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
72.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
69.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
67.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
64.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
63.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
57.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
56.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
55.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
54.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
54.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
54.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
52.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
52.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
51.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
50.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
50.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
50.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
49.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
48.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
47.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
47.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
46.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
45.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
45.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
45.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
45.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
45.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
45.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
44.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
44.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
44.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
44.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
44.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
43.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
43.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
42.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
42.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
41.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
41.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
41.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
41.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
40.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
40.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
39.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
39.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
38.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
38.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
38.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
38.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
38.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
37.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
37.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
37.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
37.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
37.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
37.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
37.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
37.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
36.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
36.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
36.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
36.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
36.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
36.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
35.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
35.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
34.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
34.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
34.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
34.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
34.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
34.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
34.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
34.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
33.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
33.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
33.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
33.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
33.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
33.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
33.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
33.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
33.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
33.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
32.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
32.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
32.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
32.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
32.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
32.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
32.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
32.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
32.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
32.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
32.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
32.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
31.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
31.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
31.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
31.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
31.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
31.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
31.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
31.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
31.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
31.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
31.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
31.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
31.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
31.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
31.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
30.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
30.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
30.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
30.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
30.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
30.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
30.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
30.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
30.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
30.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
30.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
30.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
30.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
30.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
30.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
30.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
30.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
30.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
30.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
30.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
30.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
30.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
29.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
29.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
29.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
29.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
29.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
29.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
29.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
29.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
29.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
29.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
28.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
28.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
28.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
28.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
28.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
28.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
28.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
28.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
28.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
28.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
28.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
28.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
28.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
28.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
28.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
28.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
27.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
27.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
27.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
27.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
27.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
27.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
27.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
27.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
27.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
27.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
27.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
27.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
27.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
27.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
27.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
26.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
26.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
26.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
26.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
26.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
26.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
26.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
26.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
26.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
26.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
26.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
26.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
26.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
25.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
25.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
25.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
25.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
25.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
25.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
25.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
25.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
25.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
25.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
25.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
25.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
25.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
25.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
25.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
25.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
25.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
24.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
24.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
24.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
24.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
24.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
24.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
24.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
24.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
24.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
24.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
24.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
24.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
24.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
24.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
24.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
24.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
24.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
23.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
23.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
23.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
23.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
23.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
23.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
23.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
23.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
23.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
23.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
23.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
23.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
23.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
22.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
22.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
22.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
22.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
22.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
22.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
22.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
22.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
21.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
21.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
21.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
21.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
21.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
21.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
21.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
20.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
20.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
20.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
20.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
20.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
20.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
19.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
19.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
19.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
19.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
19.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
19.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
19.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
18.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
18.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
17.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
17.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
15.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
15.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OSER1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
108.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
94.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
81.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
73.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
62.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
54.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
53.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
52.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
50.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
50.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
49.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
48.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
48.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
47.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
46.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
44.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
43.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
43.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
43.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
42.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
42.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
41.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
41.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
41.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
41.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
40.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
39.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
39.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
39.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
39.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
38.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
38.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
36.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
36.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
34.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
33.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
33.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
33.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
32.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
32.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
32.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
32.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
32.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
31.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
31.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
31.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
31.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
29.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
29.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
28.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
28.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
28.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
27.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
27.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
26.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
25.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
23.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
21.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
21.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
20.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OSER1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
69.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
67.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
65.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
65.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
62.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
61.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
55.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
53.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
51.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
50.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
49.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
48.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
48.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
45.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
45.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
44.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
40.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
40.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
38.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
37.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
37.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
37.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
37.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
36.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
36.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
36.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
35.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
35.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
35.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
35.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
34.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
34.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
34.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
34.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
33.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
33.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
33.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
33.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
33.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
32.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
32.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
32.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
32.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
31.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
31.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
31.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
31.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
30.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
30.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
30.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
30.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
29.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
29.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
28.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
28.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
28.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
28.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
28.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
27.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
27.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
27.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
26.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
26.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
25.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
25.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
25.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
25.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
24.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
24.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
23.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
23.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
23.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
23.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
23.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
23.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
22.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
22.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
22.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
22.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
22.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
21.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
21.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
21.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
21.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
21.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
20.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
20.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
19.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
19.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
19.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
19.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
18.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
18.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
18.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
18.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
17.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
17.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
17.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
16.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
16.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
16.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
15.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
15.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
14.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
14.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
13.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
13.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
13.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
13.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
7.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
